Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1044 ATGACAGCAATATTGTTATGCATCATAATTTCTTGTTATAGACACAAGTCATTATCATTGCAAGTCAAACTTTGGTTGACCACAAAGAGTGACCTACATATCGAAGCATTCTTAAAAGAGCATGGAGCTCTAGCACAGAAAAGATACAAATTTTCAGAAGTCAAGAAAATGACCAATTACTTCAAAGATAAACTGGGTCAAGGTGGTTTTGGTGCCGTATATAAAGGAAAGCTACCCACTGGTTACCCTGTGGCTGTAAAATTGTTGAAATCATCCAAAGGAAATGGCGAAGATTTTATCAATGAGGTTGCTAGCATTAGTAGAACCTATCATGTTAATGTTGTCACCCTTCTTGGATTTTGTTTGGAAGACCAGAAGAAAGCCCTCATCTATGAGTTTATGGCAAACGGTTCCCTCGATAAGTACATTTACAATGAAGGGCCTGAAACCATTGCATCTTTGAGCTGGGAGAATTTGTATCAAATTGCAATAGGAATAGCTCATGGTTTGGAGTACTTGCATAGGGGATGCAAAACTCGAATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAGAATTTCTGCCCCAAGATATCAGATTTTGGGCTAGCAAAGCTCTGTCCAAGGAAAGAGAGCATTATCTCCATGTCAGATGCTAGAGGGACAATGGGATATGTAGCTCCAGAAATGTGCAATAGACATTTTGGTGGAGTTTCACATAAGTCTGATGTTTATAGCTATGGAATGATGCTACTAGAAATGGTGGGAGGAAGGAAGAATATTAATGACGAAGCAAGTCAAACAAGTGAGATATTCTTCCCACATTTGGTATACAAGAGGCTTGAGTTGGACAATGATATAAGACCAGATGAGGTGATGACCATAGAAGAAAATGAGATTGCAAAGAAAATGACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATGACAGGCCTACAATGAGTAGAGTGGTAGATATGTTGGAAGGCAGCATGAATTCCCTGGAAATTCCACCAAAACCTTTGCTTTCTTCTCCTACTAGAACGGGAACAGAGTCTTCCTCTTCTAATTAA 1086 0.384 MTAILLCIIISCYRHKSLSLQVKLWLTTKSDLHIEAFLKEHGALAQKRYKFSEVKKMTNYFKDKLGQGGFGAVYKGKLPTGYPVAVKLLKSSKGNGEDFINEVASISRTYHVNVVTLLGFCLEDQKKALIYEFMANGSLDKYIYNEGPETIASLSWENLYQIAIGIAHGLEYLHRGCKTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDARGTMGYVAPEMCNRHFGGVSHKSDVYSYGMMLLEMVGGRKNINDEASQTSEIFFPHLVYKRLELDNDIRPDEVMTIEENEIAKKMTIVGLWCIQTFPNDRPTMSRVVDMLEGSMNSLEIPPKPLLSSPTRTGTESSSSN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1044 361 Pfam Protein kinase domain 62 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1044 361 Gene3D Phosphorylase Kinase; domain 1 25 133 - -
Apr6g1044 361 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 360 - -
Apr6g1044 361 ProSiteProfiles Protein kinase domain profile. 59 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1044 361 MobiDBLite consensus disorder prediction 340 361 - -
Apr6g1044 361 SUPERFAMILY Protein kinase-like (PK-like) 47 333 IPR011009 -
Apr6g1044 361 Gene3D Transferase(Phosphotransferase) domain 1 134 341 - -
Apr6g1044 361 ProSitePatterns Protein kinases ATP-binding region signature. 65 87 IPR017441 GO:0005524
Apr6g1044 361 CDD STKc_IRAK 65 334 - -
Apr6g1044 361 MobiDBLite consensus disorder prediction 342 361 - -
Apr6g1044 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Apr6g1044 361 SMART serkin_6 59 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1044 361 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 360 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1044 Apr-Chr6 15141517 15147434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1044 29 358 Receptor kinase-like Gene Family AT4G18250 56.509 1.19e-126 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr6g1044 Pkinase 4.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1044 - - gmx:100800335 615.535