Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1043 ATGTTCCGTGTTATCCCTCTCCTTTACGTCTTATCTTTAACTGCAACTCTTCTTCATCCAAGTAGCACTAATGTCAATTTCAACACTGCCTCTGCACTTAAGGGTAGAAAGCATCTAAACGAGGACTTGGAAACAGTCAAAGTTGACGACAAAGGCAGTAACGGGCACCATGAGTCTTTCAGAAATGGGAATGCACAAGACAACCTTAAAGTTGATGTCTACAGCTCCTGCAATGGCAGGGAAGATTGCAACAACAGCAGCAGCAGAAGCTCATTGGGAAGTGATTCTGCCAATGTGGTGAGGGTTAAAAGAATGAGAATAGTGTACACTGTTAATTCTTCTAGTTCTGCTTCTGCTACGGTATGCAGTTCTGGCTCTCGATATCGAAGCTGTCTCAGAAGTTCAGCGTCACCTCGATCCTCACCATCATCATCGCCATCACATTCAGCTCATCGATTATCACCATCATCATCATCGCCATTGCATTCAATACCACCATCATCACCACTTCTTCCACCATCCCCATCACCAACACCTTCACCAACACCAACATTTTTACCACCATCACCACCACCATCACCAGCATCAGGTAATCACCACCATGTTGGTTCATGGAAAATCGCCATAGGTATTGCAAGTGGGATCATGTCAGCAATATTGATGTGCATCGTAATTTGTTGTTATAGATACAAGTCATTATCAATGCAAGTCAAACTTTGGTTCACCACAAAAAGTGACCTACATATTGAAGCATTCTTAAAAGAGCATAGAGCTCTAGCACAGAAAAGATACAAATTTTCAGAAGTCAAGAAAATGACCAATTACTTCAAAGATAAACTGGGTCAAGGTGGTTTTGGTGCCGTATATAAAGGAAAGCTACCCACTGGTTACCCTGTGGCTGTAAAATTGTTGAAATCATCCAAAGGAAATGGCGAAGATTTTATCAATGAGGTTGCTAGCATTACTAGAACCTCTCATGTTAATGTTGTCACCCTTCTTGGATTTTGTTTGGAAGGCCAGAAGAAAGCTCTCATCTATGAGTTTATGGCAAATGGTTCCCTTGATAAGTACATTTACAATAAAGGGCCTGAAACCATTGCATCTTTGAGCTGGGAGAATTTGTATCAAATTGCAATAGGAATAGCTCATGGTTTGGAGTACTTGCATAGGGGATGCAAAACTCGAATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAGAATTTCTGCCCCAAGATATCAGATTTTGGGCTAGCAAAGCTCTGTCCAAGGAAAGAGAGCATTATCTCCATGTCAGATGCTAGAGGGACAATGGGATATGTAGCTCCAGAAATGTGCAATAGACATTTTGGTGGAGTTTCACATAAGTCTGATGTTTATAGCTATGGAATGATGCTGCTAGAAATGGTGGGAGGGAGGAAGAATATTAATGCTGAAGCAAGTCAAACAAGTGAAATATTCTTCCCACATTTGGTATACAAGAGGCTTGAATTGGACAATGATATAAGACCAGATGAGGTGATGACCATAGAAGAAAATGAGATTGCAAAGAGAATGACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATGACAGGCCTACAATGAGTAGAGTGGTAGATATGTTGGAAGGCAGCATGAATTCCTTGGAAATTCCACCAAAACCTTTGCTTTCTTCTCCTACTAGAACGGGAACAGAGTCTTCCTCTTCTAATTAA 1731 0.4061 MFRVIPLLYVLSLTATLLHPSSTNVNFNTASALKGRKHLNEDLETVKVDDKGSNGHHESFRNGNAQDNLKVDVYSSCNGREDCNNSSSRSSLGSDSANVVRVKRMRIVYTVNSSSSASATVCSSGSRYRSCLRSSASPRSSPSSSPSHSAHRLSPSSSSPLHSIPPSSPLLPPSPSPTPSPTPTFLPPSPPPSPASGNHHHVGSWKIAIGIASGIMSAILMCIVICCYRYKSLSMQVKLWFTTKSDLHIEAFLKEHRALAQKRYKFSEVKKMTNYFKDKLGQGGFGAVYKGKLPTGYPVAVKLLKSSKGNGEDFINEVASITRTSHVNVVTLLGFCLEGQKKALIYEFMANGSLDKYIYNKGPETIASLSWENLYQIAIGIAHGLEYLHRGCKTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDARGTMGYVAPEMCNRHFGGVSHKSDVYSYGMMLLEMVGGRKNINAEASQTSEIFFPHLVYKRLELDNDIRPDEVMTIEENEIAKRMTIVGLWCIQTFPNDRPTMSRVVDMLEGSMNSLEIPPKPLLSSPTRTGTESSSSN* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1043 576 MobiDBLite consensus disorder prediction 555 576 - -
Apr6g1043 576 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
Apr6g1043 576 SMART serkin_6 274 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1043 576 MobiDBLite consensus disorder prediction 133 199 - -
Apr6g1043 576 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 197 575 - -
Apr6g1043 576 MobiDBLite consensus disorder prediction 557 576 - -
Apr6g1043 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Apr6g1043 576 PANTHER RUST RESISTANCE KINASE LR10-RELATED 197 575 IPR045874 GO:0004672
Apr6g1043 576 ProSiteProfiles Protein kinase domain profile. 274 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1043 576 MobiDBLite consensus disorder prediction 133 164 - -
Apr6g1043 576 Gene3D Transferase(Phosphotransferase) domain 1 349 556 - -
Apr6g1043 576 SUPERFAMILY Protein kinase-like (PK-like) 261 548 IPR011009 -
Apr6g1043 576 CDD STKc_IRAK 280 549 - -
Apr6g1043 576 MobiDBLite consensus disorder prediction 165 195 - -
Apr6g1043 576 Pfam Protein kinase domain 277 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1043 576 Gene3D Phosphorylase Kinase; domain 1 240 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1043 Apr-Chr6 15134019 15139242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1043 115 573 Receptor kinase-like Gene Family AT4G18250 45.085 2.62e-130 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr6g1043 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1043 - - gmx:100800335 635.565