Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1020 ATGGCCTTGGCTATGGTGGGAGAGGCACTCATCTCTGCTTCTGTGGAGATGTTTTTAGATAGAATAACTTCTACAGAGTTTCGAGATTTCTTTGCCAAAAGGAGGCTCAATGTTTATTTGTTAGATGAACTGAGGATAAAGCTGCTGGCACTTGATGCTGTGTTCAATGATGCTGAGGAGAAGCAGATCACCGATCTCGCCGTGAGGGCATGGCTTGATGAGTTGAAGGATGCTGTCTTGGATGCAGAAGATTTGTTGGATGAAATCAACACTGAATCTTTGAGATACAAGGTGGAGGGAGAATCTAAAAGCTTTACCCAGGTGAGATCATTATTTTCTTCTCCCTTTAAAACACTGAATTCCAAACTTGAAGCAATATCTGGAAGGCTAGAACATTTTCTGAAACAGAAAGATATTCTTGGTTTGCAAAGTGTTTCTAGGAATGTCTCTTGTAGCAAGAGTACAGATTCGTTGGTTGAACCCGTTGTGGTTGCTAGAAAGGATGACAAAGACAAGTTACTGAAGATGCTTCTATCTGATGTTGATGCCAAATCTAATAATAATACAGAAGTGATCACAATCCTAGGCATGGGAGGTCTGGGCAAAACAACCCTTGCTCAATACCTTTATAATGATAGTAAAGTACAGAACCATTTTGATTTGAAAGCTTGGGTATGGGTATCGGATGTATATGATGTTTTCAAGGTAACAAAACAAATTGTTGATTCTGTATCATCCAAAGATTGTAATAGCACCAATCCTGATGTTCTTCGCGTTGAATTAAAAAATAGCTTGAAAGATAAAAAATTTTTGCTTGTGCTTGATGACCTCTGGAATGAAGAGTATAATGACTGGAATCAATTGATAACTCCTTTTACTAGTGGGAAAAAGGGAAGTAGGATCATTGTGACAACCCGACAACCAGAAGTTGCAAAGTTTACCCATACATTTCCCACTTACAAGCTGGAATCTCTGACAGAGGAAGATTGTTGGAGGATACTGGCAAATCATGCATTTGGAAATGAAGGTTACGACAAATATCCAAGTCTAGAAAAAATTGGTCGGCAAATTGCAAGAAAATGTGATGGCCTACCATTAGCTGCTAAAACATTGGGAGGTCTTTTGCGATCAGATGTTGATGAAAAGGAATGGAAAAGAGTTCTAGACAGCAAGTTGTGGGCACACAACGATGTTTTACCAGCTTTGAGCATAAGTTATCTTCATCTTCCAGCACATTTGAAAAGATGTTTTGCCTATTGCTCAATCTTTCCAAAACAACATCTGTTGGACCGAGAAGACTTGATTTTGTTATGGATGGCTGAAGGCCTTCTACAACAATCCGCAGAGAAAGAACTGGAATTAGTTGGTTCTGATTGCTTTAACGAGTTATTATCCAGATCCTTAATTCAGAGATACAAAGCTGTTTCAGAGTACAAGTTCCAAATGCATGACCTCATCTATGATTTAGCTCCAGAGGACAAGTTCCGAATGCATGACCTCATCTATGATTTAGCTAGACTTGTATCAGGAAAAAGATCTCACTACCTGGATTGCAGTGAAATTCCAAAAAATGTGCGCCATCTATCTTTTTCTAGCAACAATTATGACGTCTCTAAAAGATTTGAGAGCTTCTATGAGCTGAAATGTTTGCGGACCTTTCTACCATTGAATAGATGGGGCTGTAACATAACCAGAAAAGTGCCACAAGACTTGTTGCCAAAACTAAAATGCCTACGAGTTCTATCATTATCAAACTATCGAAACATCACTGAGCTGCCTGATTCTATCTACGTCTTGGTGCTTCTGCGGTATCTTGACCTTTCCTCTACTTCCATGAAAAGGTTGCCTGATGCAACCTTCAAGCTTTACAATTTGCAGACTTTGAAATTGTCAAACTGTAGTTCTCTTGTTGAGCTATCTGATTCCATAGGCATCTTGGTGCTTCTGCGGTATCTTGACCTTTCCTATACTTCCATCAAAAGGTTGCCTGATGCAACCTTCAAGCTTTACAATTTGCAGACTTTGAAATTATCAAACTGTAGATCTCTTACTGAGATACCAGCACAGATAGGAAATTTGGTCAATTTACGACACCTTGATATCAGTGACACAAATTTGATGGAGATGCCAACAGAGATATGCAGGCTACAAGATCTCTGTACACTGACTTCTTTTGTTGTAGGCAATAAAGATGGATTAAAGATCAGTGAATTAAGAAAATTTCCCTATTTGCAGGGTAAGCTTTCCATTCTGAAGCTGCACAATGTTTTTGATCCCAGAGATGCATTTCAAGCCAACTTAAAGAACAAAGAGCAGATTGAGGAGCTTATGCTCGAGTGGGGCAGCGACCCACAAGATTCACAAGTTGAGAAGGATGTACTTGACAACTTGCAACCATCCACGATGTTAAAGAAACTGATCATCAGATACTACAATGGCACAAGTTTCCCAAATTGGCTGGGTGATTCTTCATACTGTAATGTTCAAGTCCTGTATATCAGTGACTGCAACTATTGCCTTTCACTTCCACCGTTTGGACAATTACCTTCTCTTAAGAAGCTTGTCATTAAAAAGATGAAAATGGTGAAGACAGTTGGTCAAGAGTTCTACTGCAGCAGTGCAAGCTCCCAATCTTTCCAGCCATTTACATTGTTGGAAAGTCTTGCGTTTGAAGAGATGTCAGAGTGGGAGGAGTGGCTAGCATTTGAAGGTAAAGGTAGCGATTTTCCTTTTCCTTGTCTGAAGCGTTTGAGTTTATCCGAATGTCCCTTGTTGAGAGGAAACTTGCCCAGTCGTCTACCTTCTTTGGAACAGGTTCATATCGCAGGGTGCAACCAGCTGGAGGCAAAATCATGCGATGTGCAGTGGAATACATCAAATGAAGAAATGAGTGTTAGAGAAGGGGGAGAGGGGTTGTCTTTGCTTGACAACTTGTCTTGTCGCGAACTATCAATTGAAAATTGTGACAGCCTGCAGTGTTTGCCAAGAATGATTCTTAATGCCAATTGTCTTCAAAGCTTGTATCTTAGAAATATCAGGTCTTCCATGTCCCTCCCAACTGATGGTTTGCCCACGTCATTGCAAACACTTCATATCTTTAACTGTGAGAAGTTAGAATTTGTGTGTGCTGAAAGATGGCAGAAATACACATCACTTGAATTCCTGTCAATCTTTAGGAGTTGTGATTCGCTCATGTACTTTCCGTTAGATTGCTTCCCAGCTCTTCGATGCCTTATTATCAATCTGTGTCCCAACTTGGAAGCAATTACTGATAAAGGTGGAAGGGCCTCTCCTAATTTATTAACTGATTTTTATGTCTATAATTGTAAGAAACTTAGGTCACTTCCAAGCTGGTTTCCTTCCAATTTACAAGTTCTTGGTGTTTATGGTGGAATATTTACCTTCCAATTACGCGTCACTTCTCTGTCATGTCTTAGTCTCAATGGGAGAGGTTTGGGGGATGTGATCAATACCTTGCTGAGGGAGCCATCACTGCCCACTTCTCTCACGTCTCTGAGTCTGTCCTTTTTTTATGGTTTAAAGCGGTTGGAAGGGAAAGGGCTTCAACATCTCACTTCTCTGAAAACGCTTTACATCTTCCAATGTGAAAGCCTCGAGTCATTGCCAGAGGATCAACTGCCATCGTCTCTTGAATTACTGAGATATGGAGTTGTTGATTACTAG 3684 0.402 MALAMVGEALISASVEMFLDRITSTEFRDFFAKRRLNVYLLDELRIKLLALDAVFNDAEEKQITDLAVRAWLDELKDAVLDAEDLLDEINTESLRYKVEGESKSFTQVRSLFSSPFKTLNSKLEAISGRLEHFLKQKDILGLQSVSRNVSCSKSTDSLVEPVVVARKDDKDKLLKMLLSDVDAKSNNNTEVITILGMGGLGKTTLAQYLYNDSKVQNHFDLKAWVWVSDVYDVFKVTKQIVDSVSSKDCNSTNPDVLRVELKNSLKDKKFLLVLDDLWNEEYNDWNQLITPFTSGKKGSRIIVTTRQPEVAKFTHTFPTYKLESLTEEDCWRILANHAFGNEGYDKYPSLEKIGRQIARKCDGLPLAAKTLGGLLRSDVDEKEWKRVLDSKLWAHNDVLPALSISYLHLPAHLKRCFAYCSIFPKQHLLDREDLILLWMAEGLLQQSAEKELELVGSDCFNELLSRSLIQRYKAVSEYKFQMHDLIYDLAPEDKFRMHDLIYDLARLVSGKRSHYLDCSEIPKNVRHLSFSSNNYDVSKRFESFYELKCLRTFLPLNRWGCNITRKVPQDLLPKLKCLRVLSLSNYRNITELPDSIYVLVLLRYLDLSSTSMKRLPDATFKLYNLQTLKLSNCSSLVELSDSIGILVLLRYLDLSYTSIKRLPDATFKLYNLQTLKLSNCRSLTEIPAQIGNLVNLRHLDISDTNLMEMPTEICRLQDLCTLTSFVVGNKDGLKISELRKFPYLQGKLSILKLHNVFDPRDAFQANLKNKEQIEELMLEWGSDPQDSQVEKDVLDNLQPSTMLKKLIIRYYNGTSFPNWLGDSSYCNVQVLYISDCNYCLSLPPFGQLPSLKKLVIKKMKMVKTVGQEFYCSSASSQSFQPFTLLESLAFEEMSEWEEWLAFEGKGSDFPFPCLKRLSLSECPLLRGNLPSRLPSLEQVHIAGCNQLEAKSCDVQWNTSNEEMSVREGGEGLSLLDNLSCRELSIENCDSLQCLPRMILNANCLQSLYLRNIRSSMSLPTDGLPTSLQTLHIFNCEKLEFVCAERWQKYTSLEFLSIFRSCDSLMYFPLDCFPALRCLIINLCPNLEAITDKGGRASPNLLTDFYVYNCKKLRSLPSWFPSNLQVLGVYGGIFTFQLRVTSLSCLSLNGRGLGDVINTLLREPSLPTSLTSLSLSFFYGLKRLEGKGLQHLTSLKTLYIFQCESLESLPEDQLPSSLELLRYGVVDY* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1020 1227 Gene3D - 405 493 IPR036388 -
Apr6g1020 1227 Coils Coil 41 61 - -
Apr6g1020 1227 Pfam NB-ARC domain 168 389 IPR002182 GO:0043531
Apr6g1020 1227 Gene3D Ribonuclease Inhibitor 967 1225 IPR032675 -
Apr6g1020 1227 Gene3D - 324 404 IPR042197 -
Apr6g1020 1227 Coils Coil 72 92 - -
Apr6g1020 1227 PRINTS Disease resistance protein signature 191 206 - -
Apr6g1020 1227 PRINTS Disease resistance protein signature 264 278 - -
Apr6g1020 1227 PRINTS Disease resistance protein signature 361 375 - -
Apr6g1020 1227 PRINTS Disease resistance protein signature 620 636 - -
Apr6g1020 1227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 420 IPR027417 -
Apr6g1020 1227 Gene3D - 40 125 - -
Apr6g1020 1227 SUPERFAMILY L domain-like 547 947 - -
Apr6g1020 1227 Pfam Rx N-terminal domain 40 104 IPR041118 -
Apr6g1020 1227 Gene3D Ribonuclease Inhibitor 640 964 IPR032675 -
Apr6g1020 1227 Gene3D - 147 317 IPR027417 -
Apr6g1020 1227 Pfam Leucine rich repeat 649 706 IPR001611 GO:0005515
Apr6g1020 1227 Gene3D Ribonuclease Inhibitor 512 639 IPR032675 -
Apr6g1020 1227 SMART LRR_typ_2 693 716 IPR003591 -
Apr6g1020 1227 SMART LRR_typ_2 646 669 IPR003591 -
Apr6g1020 1227 SMART LRR_typ_2 599 622 IPR003591 -
Apr6g1020 1227 PANTHER - 628 974 - -
Apr6g1020 1227 PANTHER - 51 634 - -
Apr6g1020 1227 SUPERFAMILY L domain-like 977 1221 - -
Apr6g1020 1227 PANTHER DISEASE RESISTANCE PROTEIN RP 628 974 IPR044974 GO:0006952
Apr6g1020 1227 PANTHER DISEASE RESISTANCE PROTEIN RP 51 634 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1020 Apr-Chr6 14911446 14921359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1020 192 755 WRKY Transcription Factor Family AT5G45050 22.417 3.68e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1020 - - aprc:113867106 2370.89