Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1018 ATGAATGAAAGCACAGAGAGCCAGAAGCGTGAAGCTGATTCAGAAAGCAAGGAGGATGGGGTTGCTTCGAAGAAGGTCAAGATCGAATCATCTGTAATGGGTTCGGATGAGAATGGTGTGAACCAATTGACTTTCCACATTGAAGCTGATGCTGCTGAGGATAAGGGTTCGAGGCATGCCATGGAAGATGCATGGGTGCTTCTTCCTGATGCAAGTTTAGATTACCCTGGAAATTTGAGATGTGCACACTTTGCAATTTATGATGGACACGGAGGTCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATGGGAATGTTCTTTCAGCTGGATTACCACGTGAGTTGTTGGACATAAAGACAGCTAAACGATCTATCCTGGATGGTTTTCGTAAAACTGACGAGTCTCTTCTTCAAGAAAGTTCTGAAGGGGGGTGGCAGGATGGTGCTACAGCCGTATGTGTGTGGGTATTGGGACAAAAAGCTGGTGGTTTTGTGAGCTCAGATGGACGATTACAAGGACGACTAGAAGTTTCTAGGGCTTTTGGTGATCGCCAGCTCAAAAAGGTGGGTGTCACTGCAACCCCAGATATCTATTCTTTTGACCTAACTGATAGAGTGCACTTCATCATTCTTGGCTGTGATGGCTTGTGGGGGGTGTTTGGTCCCAGTGATGCTGTTGATTTTGTTCGGAAGTTATTGAATGAAGGGCTACCTGTTACATCTATTAGTCGCCGACTTGTAAGGGAAGCTGTTCGTGAGCGCCGTTGTAAAGATAACTGTACTGCCATTGTCATTGTATTCAAACGCAATTAA 816 0.4522 MNESTESQKREADSESKEDGVASKKVKIESSVMGSDENGVNQLTFHIEADAAEDKGSRHAMEDAWVLLPDASLDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLSAGLPRELLDIKTAKRSILDGFRKTDESLLQESSEGGWQDGATAVCVWVLGQKAGGFVSSDGRLQGRLEVSRAFGDRQLKKVGVTATPDIYSFDLTDRVHFIILGCDGLWGVFGPSDAVDFVRKLLNEGLPVTSISRRLVREAVRERRCKDNCTAIVIVFKRN* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1018 271 Gene3D - 46 160 IPR036457 -
Apr6g1018 271 SUPERFAMILY PP2C-like 43 269 IPR036457 -
Apr6g1018 271 SMART PP2C_4 44 266 IPR001932 -
Apr6g1018 271 MobiDBLite consensus disorder prediction 1 30 - -
Apr6g1018 271 MobiDBLite consensus disorder prediction 1 25 - -
Apr6g1018 271 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 160 265 - -
Apr6g1018 271 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 7 160 - -
Apr6g1018 271 CDD PP2Cc 52 268 IPR001932 -
Apr6g1018 271 Pfam Protein phosphatase 2C 160 256 IPR001932 -
Apr6g1018 271 ProSiteProfiles PPM-type phosphatase domain profile. 48 268 IPR001932 -
Apr6g1018 271 Gene3D - 161 271 IPR036457 -
Apr6g1018 271 PANTHER PROTEIN PHOSPHATASE 2C 7 160 IPR015655 GO:0004722|GO:0006470
Apr6g1018 271 PANTHER PROTEIN PHOSPHATASE 2C 160 265 IPR015655 GO:0004722|GO:0006470
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1018 45 220 PP2C-type Phosphatase Gene Family AT1G18030 57.759 3.47e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1018 K17500 - gmx:100815852 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1018 6 14877028 14884625 Apr6g1018 6 14877028 14884625 ECH