Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1017 ATGGGTAGTGTTGTGACAGAGAAAGTGAAGCTTATTGGGGCATTACTTGCCTTGCAGTTCTGCTTTGCAGGATTTCACATCGTCTCTAGACTTGCACTGAACATTGGTGTCAGCGAAGTTGTTTTCGCAGTTTATAGAAATTTAATTGCCTTGCTTTTGTTGAGTCCATTTGCTTATTTGTTGGAGAAGAATCAAAGACCACCCCTTACCGTATCTTTACTGGTTCAGTTCTTCCTATTAGCATTAGTGGGGATCACTGCAAACCAAGGGTTTTACTTGTTGGGATTATATTATGCTTCTCCAACTTTTGCTTCTGCATTGCAAAACTCAGTACCTGCAATCACTTTTGTCTTGGCTTTGGCTTTAAGGCTTGAGGAAGCCAAAATCACAAGGAGAGATGGATTGGCAAAAGTTCTTGGAACAATTGCCAGTGTGGGGGGTGCCACCATAATTACCCTTTACAAAGGTCCTCCTCTTCTTCATCTGCAGATGGACCAACTACAAGGAGACACTATAGAAGTTGATCAGTCTTCAACAAAAACGCAAAATTGGACTTGGGGTTGCATATACTTGCTTGGACATTGTTTATCATGGGCTGGTTGGATAGTTTTTCAGGCACCTGTGGTGAAGAAGTATCCAGCAAAACTAACCCTTACTTCGTTTACATTATTCTTTGGATTGATCCAATTCTTGGTCATAGCAGCCTTTGCAGAGAATGACTTGGAAAATTGGAAGATAATATCATTAGAGGAGCTTTTTATCCTCCTATATGCTGGAATTGTAGCATCTGGCATTGTGATATCTCTTCAAACATGGTGTATTCAAAAGGGTGGTCCTGTGTTTGTTGCTGCCTTCCAGCCAGTGCAAACTTTTCTAGTTGCTGTAATGGCAGCCTTAATTCTTGGTGATCAGTTATACACCGGAGGGCTTATTGGTGCAATTCTCGTTGTGCTTGGTCTATACTTAGTCCTATGGGGAAAAACCAATGAAAAAAATGTGACTGATCCATCAATAACAAAGCCATTGCTTAAGGAAGAGGAAGAGAATAAAGAAACTGATGAAGCTCCAAAAGATATACCATGA 1083 0.4072 MGSVVTEKVKLIGALLALQFCFAGFHIVSRLALNIGVSEVVFAVYRNLIALLLLSPFAYLLEKNQRPPLTVSLLVQFFLLALVGITANQGFYLLGLYYASPTFASALQNSVPAITFVLALALRLEEAKITRRDGLAKVLGTIASVGGATIITLYKGPPLLHLQMDQLQGDTIEVDQSSTKTQNWTWGCIYLLGHCLSWAGWIVFQAPVVKKYPAKLTLTSFTLFFGLIQFLVIAAFAENDLENWKIISLEELFILLYAGIVASGIVISLQTWCIQKGGPVFVAAFQPVQTFLVAVMAALILGDQLYTGGLIGAILVVLGLYLVLWGKTNEKNVTDPSITKPLLKEEEENKETDEAPKDIP* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1017 360 MobiDBLite consensus disorder prediction 340 360 - -
Apr6g1017 360 PANTHER WAT1-RELATED PROTEIN 8 341 IPR030184 GO:0016021|GO:0022857
Apr6g1017 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Apr6g1017 360 MobiDBLite consensus disorder prediction 335 360 - -
Apr6g1017 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 328 - -
Apr6g1017 360 PANTHER WAT1-RELATED PROTEIN 8 341 - -
Apr6g1017 360 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Apr6g1017 360 Pfam EamA-like transporter family 15 151 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1017 Apr-Chr6 14872582 14874403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1017 4 354 Nodulin-like Gene Family AT3G18200 65.084 1.78e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1017 - - gmx:100812601 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1017 6 14872582 14874403 Apr6g1017 6 14872582 14874403 ECH