Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1001 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGATAATGAACAAGGTTCTTCTTCATCGAAGGGCAATAAGTCAAATCTTGGTTCATCTTCATCCTCTAAGAAGCTATCGCGCTCTAAGTCTCCTCAAAGTTCTGAGCACAAGCCCTTTTCTGGGCTCTCAAATTGGTTGCATTCAGTTACAAATAGGCAGAGTCCTGGTCCTCCATCTTTGAGCCAGGCAAGAGGAGAGAGAATGGAGCCATCTGATGCAGTGAGCAGTGGTGGATTGGATGTTGTTTCAGATTCAGCAAGGCGTGATTCGGGGTCTAGTGCTTCCAGGGATCCTGAAGTGGAGGAAGAGTATCAGATACAGTTGGCTTTGGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTAGGGTCTTGTGACCCTGATTATACACCAGCTGAAGTTGTGGGGTACCGATATTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTTGGATGGTTTCTATGATCTCTATGGGATTGAGTCAAACCCTACAAGAATGCCTTCCCTGGTAGATCTTCAAGGAACACTAATCTCAGGTAGTGGCACGTGGGAAGCTGTATTGGTCGATAGGGATGCTGATTCTAATTTGTTGAAACTTGTGGAAAAGGCCCAAGAGCTGAGTGGCAAATCAAGTCCTGATTTTGAAGTAGTTATAGATAGTAATTTGGTGCGCAAGCTTGCAACTTTTGTGGCTGACTATATGGGTGGGCCAGTTGGAGATCCTGAGAGTATGACAAGAGCATGGAGGAGTCTTAGTTACAGTCTGAAAGCAACCTTTGGTAGCATGGTTTTGCCACTTGGTTCTCTAACCATTGGATTGGCTCGGCATCGGGCGTTGTTATTTAAGGTTCTAGCTGATAGTTTGGGCATCGCATGTCGGTTGGTGAAAGGACTGCAATATACAGGTTCTGATGATGTGGCGATAAACTTTGTCAAGATTGATGATGGAAGGGAATACATTGTTGACCTAATGGCAGATCCTGGAACTCTTATTCCATCTGATGTAACGGGATCACATATGGAGTATGATGAATCTTCTTTTGTGGCCAGTCCTTCATCAAGGGATCTTGATTCGTCTCATGTAGCATCATCGAGCAGTGGTATTGGAAGTTCATATGAAGAATCTTCTGATTTGGGGATGTTAGACAAAGGAAACAGATCAAAACATTTTTCCTATCTAGGGAAAGAATCGGATATAAGCAGGCCCACCTCAGGAAAGGAAGAATCAACAAGACCCACAAATGAATTCAAAAGTTCTCACAATGTTGCGAAGATCATGGGGCAAGAAGCTCCCAGCAGATCTAATCACCCACATGTGCATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTGCGTAGAATGAAAGTCAAAGATGTTTCTCTATATATGATTGATGCAGCCAAGGAGAACCCTTACTTAGCCCAGAAACTTCATGATGTTTTACTTGAAAGCGGTGTCGTTGCTCCTCCAAATTTATTTTCTGGCATTTATCATGAGGAGTTAGGTTTCTCATCTGAGGCTAATTTCCCTACTGAAGAAAAAGATGAACACAAACAGGGAAACAGATGGCAAGAAGCTGACGTTGACGACAATCTTGGTCCTGCTCGAATTTCACCTCCTTTGTCTCAACACAGAGTTCATCCCAAAGCAAGTTCTAGCAGTCAGCTGGAGCATTCTAAGCCTGTAGAAGGTTTAGGAATCAACCTTCCTCTTCATACAAGGGAAGCAGCTGGACAACATATACCAACTCAGATCAAATATGGGCATAATGTACCTGTTGCTGCAGCAGCAGCTGCTGCGGCTGCTGTTGTTGCATCTTCTGTGGTAGTTGCTGTGGCAAAATCAAGCATTGACTCAAACATTGAGCTTCCAGTAGCAGCAGCCGCTACTGCTACTGCTGCAGCAGTAGTAGCAACAACTGCTGCTGTCAGTAAACAGTATGAGCAGGGCAGTCGCAGTGATGGAGATACAGACAGTGCTGGTTATGAGCTGAAGGATAGTGGTGATGGAGAGCATATTGCTTTAGGAGCAAATTCAGAAGGCGAGAGAATATCTGATAGATCAGTAGTAAGTAGTGATAGCACAAAATCTGATTCCGCATTAGATGATGTTGCTGAGGTTGACATTCCATGGGAGGAAATCACGCTGGGATCGTATGGGGAGGTGTACCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTCTAGATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAACTGAGGTCAAAATAATGAAAAGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTATAACTCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGATTACTTCACCGACCAAACAGTCAATTAGATGAGCGAAGGCGTTTGAAGATGGCCCTCGATACTGCTCGAGGAATGAACTATTTGCACAACTGCACTCCAGTGATAGTGCATCGTGATTTGAAGTCTCCCAATCTTCTTGTTGACAAAAATTGGGTTGTAAAGGTATGTGACTTTGGCTTATCTCGTATGAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCTGAGGTGTTGAGAAATGAACCATCTAATGAGAAGTGTGACGTTTATAGCTTTGGGGTCATTTTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGGGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAGCAACGTCGTCTTGACATTCCTGATGACATGGACCCTACCATTGCAGATATTATCAGGAAATGCTGGCAGACAGATCCAAAGTTGAGACCTTCATTTGCTGAAATATTGGCGGCTCTGAAGCCATTACAGAAGCCACTTATTGGTTCTCAAGTGCCTCGACCGAGTGGACTGGGGAAGCATGAAAAGGCTCAGTCATCGCGCATTGGAGAAGACTCCGCAAGATAG 3078 0.4415 MKNILKKLHIMSNQSDNEQGSSSSKGNKSNLGSSSSSKKLSRSKSPQSSEHKPFSGLSNWLHSVTNRQSPGPPSLSQARGERMEPSDAVSSGGLDVVSDSARRDSGSSASRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDYTPAEVVGYRYWNYNALGYDDKILDGFYDLYGIESNPTRMPSLVDLQGTLISGSGTWEAVLVDRDADSNLLKLVEKAQELSGKSSPDFEVVIDSNLVRKLATFVADYMGGPVGDPESMTRAWRSLSYSLKATFGSMVLPLGSLTIGLARHRALLFKVLADSLGIACRLVKGLQYTGSDDVAINFVKIDDGREYIVDLMADPGTLIPSDVTGSHMEYDESSFVASPSSRDLDSSHVASSSSGIGSSYEESSDLGMLDKGNRSKHFSYLGKESDISRPTSGKEESTRPTNEFKSSHNVAKIMGQEAPSRSNHPHVHARSPSWTEGISSPAVRRMKVKDVSLYMIDAAKENPYLAQKLHDVLLESGVVAPPNLFSGIYHEELGFSSEANFPTEEKDEHKQGNRWQEADVDDNLGPARISPPLSQHRVHPKASSSSQLEHSKPVEGLGINLPLHTREAAGQHIPTQIKYGHNVPVAAAAAAAAAVVASSVVVAVAKSSIDSNIELPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDTDSAGYELKDSGDGEHIALGANSEGERISDRSVVSSDSTKSDSALDDVAEVDIPWEEITLGSYGEVYRGEWHGTEVAVKRFLDQDISGESLEEFKTEVKIMKRLRHPNVVLFMGAITRPPNLSIVTEFLPRGSLYRLLHRPNSQLDERRRLKMALDTARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQQRRLDIPDDMDPTIADIIRKCWQTDPKLRPSFAEILAALKPLQKPLIGSQVPRPSGLGKHEKAQSSRIGEDSAR* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1001 1025 MobiDBLite consensus disorder prediction 418 476 - -
Apr6g1001 1025 Pfam Protein tyrosine and serine/threonine kinase 743 989 IPR001245 GO:0004672|GO:0006468
Apr6g1001 1025 MobiDBLite consensus disorder prediction 539 592 - -
Apr6g1001 1025 MobiDBLite consensus disorder prediction 372 399 - -
Apr6g1001 1025 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1023 - -
Apr6g1001 1025 Gene3D Phosphorylase Kinase; domain 1 735 815 - -
Apr6g1001 1025 SMART serkin_6 738 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1001 1025 Pfam Ethylene-responsive protein kinase Le-CTR1 156 357 - -
Apr6g1001 1025 MobiDBLite consensus disorder prediction 714 728 - -
Apr6g1001 1025 MobiDBLite consensus disorder prediction 372 406 - -
Apr6g1001 1025 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1023 - -
Apr6g1001 1025 MobiDBLite consensus disorder prediction 539 555 - -
Apr6g1001 1025 MobiDBLite consensus disorder prediction 998 1025 - -
Apr6g1001 1025 SUPERFAMILY Protein kinase-like (PK-like) 741 989 IPR011009 -
Apr6g1001 1025 MobiDBLite consensus disorder prediction 675 729 - -
Apr6g1001 1025 Gene3D Transferase(Phosphotransferase) domain 1 817 998 - -
Apr6g1001 1025 MobiDBLite consensus disorder prediction 8 75 - -
Apr6g1001 1025 CDD STKc_MAP3K-like 747 990 - -
Apr6g1001 1025 PRINTS Tyrosine kinase catalytic domain signature 812 825 IPR001245 GO:0004672|GO:0006468
Apr6g1001 1025 PRINTS Tyrosine kinase catalytic domain signature 851 869 IPR001245 GO:0004672|GO:0006468
Apr6g1001 1025 PRINTS Tyrosine kinase catalytic domain signature 898 908 IPR001245 GO:0004672|GO:0006468
Apr6g1001 1025 PRINTS Tyrosine kinase catalytic domain signature 917 939 IPR001245 GO:0004672|GO:0006468
Apr6g1001 1025 PRINTS Tyrosine kinase catalytic domain signature 961 983 IPR001245 GO:0004672|GO:0006468
Apr6g1001 1025 MobiDBLite consensus disorder prediction 1 117 - -
Apr6g1001 1025 MobiDBLite consensus disorder prediction 418 440 - -
Apr6g1001 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 857 869 IPR008271 GO:0004672|GO:0006468
Apr6g1001 1025 MobiDBLite consensus disorder prediction 575 589 - -
Apr6g1001 1025 ProSiteProfiles Protein kinase domain profile. 738 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1001 Apr-Chr6 14667709 14688672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1001 1 1005 MAP Kinase Kinase Kinase AT1G73660 62.083 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Apr6g1001 PK_Tyr_Ser-Thr 2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1001 - - gmx:100816332 1621.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1001 6 14667709 14688672 Apr6g1001 6 14667709 14688672 ECH