Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0998 ATGTGGATGGTGGGTTACAATGAAGGTGGTGAGTTCAACATGGTTGATCACTCATTCAATGGAAGGAAACTCATGCCTGTCATGCTGACTTCTCTTAACAATGCTTCAACAACAACAACAACTCCTTGCTTAACCCGTATTCATGGCAATGATTTCTTTTCACAATATCACTATCATCATCTGGCAACGGTGGCAGAACAAAAAAAGAGAGAGGAGTTGAATGGTGCATCACCAGTTGTGGTGAGTTCAAGGTGGAATCCTACTCCAGAGCAACTAAGAGCCCTTGAAGAGTTGTATAGAAGAGGGACAAGGACACCATCTGCAGAGCAAATCCAACACATCACTGCACAGCTTAGAAGGTTTGGTAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGGGAAAGGCAAAAGCGCCGCCGTCAGATGGAATCGGATGCTGAAACTCCAGAGAAGAAAGATTTATCTGCAAGCAGGACAGTGTTTGAAGTTGAACGGACCAAGAACTGGGCATCCTCTACAAATAGCAGTACTCTTGCAGAGGAATCTGTTTCAATACAAAGGGCAGCAGCAAAAACAGTAACTGCAACAGATGGATGGCTCCAATTCGATGAAGGGGAATTACAACAAAGAAGAAACATTTTGGAAAGAAATGCAACGTGGCATGTGATGCAGTTACCTTGTCCTTCTCCTGCACCTGCCACCTACCTCATAAACACCCCTCCTAATGCCACTGCATCTTGTAGTATGGCCACTACTACAACCACCGTAACCACAACAACAACAATGGACCCAAAGCTCATTAAGACACATGATCTCAGCTTTTTTATTTCACCACAGAGAGAAAAAGGTATTATTTACTTAAGCAGTAGCAGTAGTAGTGAAGATGATAACTGTGTGGAATCTCAAACAACCCTTCAACTTTTCCCTCTAAGGACTGGTGATGGCATCAGTGACAACATTAACGATGTAGAGACAGATATATCAGCTTCAGCAATGAATGCCAACTTGACCCCAAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAACTAA 1068 0.427 MWMVGYNEGGEFNMVDHSFNGRKLMPVMLTSLNNASTTTTTPCLTRIHGNDFFSQYHYHHLATVAEQKKREELNGASPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESDAETPEKKDLSASRTVFEVERTKNWASSTNSSTLAEESVSIQRAAAKTVTATDGWLQFDEGELQQRRNILERNATWHVMQLPCPSPAPATYLINTPPNATASCSMATTTTTVTTTTTMDPKLIKTHDLSFFISPQREKGIIYLSSSSSSEDDNCVESQTTLQLFPLRTGDGISDNINDVETDISASAMNANLTPSQFFEFLPLKN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0998 355 MobiDBLite consensus disorder prediction 144 161 - -
Apr6g0998 355 SMART HOX_1 80 147 IPR001356 GO:0003677
Apr6g0998 355 MobiDBLite consensus disorder prediction 141 161 - -
Apr6g0998 355 PANTHER WUSCHEL, PUTATIVE-RELATED 276 355 - -
Apr6g0998 355 PANTHER WUSCHEL, PUTATIVE-RELATED 11 245 - -
Apr6g0998 355 SUPERFAMILY Homeodomain-like 83 148 IPR009057 -
Apr6g0998 355 Pfam Homeodomain 83 142 IPR001356 GO:0003677
Apr6g0998 355 ProSiteProfiles 'Homeobox' domain profile. 88 143 IPR001356 GO:0003677
Apr6g0998 355 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 276 355 IPR044555 GO:0003700|GO:0099402
Apr6g0998 355 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 11 245 IPR044555 GO:0003700|GO:0099402
Apr6g0998 355 Gene3D - 81 143 - -
Apr6g0998 355 CDD homeodomain 84 144 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0998 Apr-Chr6 14641484 14644405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0998 1 355 Wox Gene Family AT3G18010 38.791 8.34e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Apr6g0998 Homeodomain 1.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0998 - - gmx:100819541 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0998 6 14641484 14644405 Apr2g1578 2 21591510 21593579 ECH
Apr6g0998 6 14641484 14644405 Apr6g0998 6 14641484 14644405 ECH