Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0995 ATGAATTTGGATTTGTTGATTATTCTACAGAAAGTATTATCTTATTATCATAAAAGGAAAGGAATGGAGGATTCACAATCAAATTCAACCCCCAAGTCTCTGATGGAAAACCTGTTAGGCCTTTTGAGGGTTCGTATCAAGCGTGGTGTCAACCTCGCCGTTCGTGATGTCCGAAGCAGTGACCCTTACGTTGTCATCAAGATGTCCAACCAGAAACTAAAGACTCGTGTGATTAAGAAAGATGTGAATCCTGAGTGGAATGAAGACCTTACGCTTTCTGTTGTAAATCCTAATCACCCAGTCCAACTGACTGTGTATGACCACGACACTTTTAGCAAAGACGACAAAATGGGAGATGCAGAATTTGACATCTTGCCCTTTTTAGAAGCCTTGAAGATGAACTTAACTGGCCTTCCAAATGGTACCACAATCACTAGAGTACAACCAAGCAGGAATAACTGTCTGGCAGATGAGAGCTGCATCACTTATAGCAACGGCAAGGTTGTCCAAGATATGATCCTTAGATTGCGAAACGTGGAATGCGGCGAAGTGGAAATCCAATTGCAATGGATTGATCTTCCGGGTTCTAAAGGTTTATGA 600 0.4183 MNLDLLIILQKVLSYYHKRKGMEDSQSNSTPKSLMENLLGLLRVRIKRGVNLAVRDVRSSDPYVVIKMSNQKLKTRVIKKDVNPEWNEDLTLSVVNPNHPVQLTVYDHDTFSKDDKMGDAEFDILPFLEALKMNLTGLPNGTTITRVQPSRNNCLADESCITYSNGKVVQDMILRLRNVECGEVEIQLQWIDLPGSKGL* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0995 199 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 30 198 IPR044562 -
Apr6g0995 199 SMART C2_3c 41 136 IPR000008 -
Apr6g0995 199 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 30 198 - -
Apr6g0995 199 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 36 125 IPR035892 -
Apr6g0995 199 CDD C2_ArfGAP 39 182 - -
Apr6g0995 199 ProSiteProfiles C2 domain profile. 23 137 IPR000008 -
Apr6g0995 199 Pfam C2 domain 40 125 IPR000008 -
Apr6g0995 199 Gene3D C2 domain 36 197 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0995 Apr-Chr6 14594883 14597076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0995 72 199 C2H2 Transcription Factor Family AT1G70790 63.846 1.64e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0995 - - gmx:100810504 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0125 7 4521331 4522937 Apr6g0995 6 14594883 14597076 ECH
Apr3g1584 3 30972708 30974491 Apr6g0995 6 14594883 14597076 ECH
Apr6g0995 6 14594883 14597076 Apr6g0995 6 14594883 14597076 ECH
Apr2g1584 2 21626142 21627023 Apr6g0995 6 14594883 14597076 PCT