Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0982 ATGGTGTTCAAAGGAAGGTTCTTCTCTTCCAAGAAATCGGATTCATCTAGCCCCGATGCTTCCTCCAATAGTCCTCGATCCTTCTCTTCCAATTCGCCTTCCAGATCCGATAAGAAAAAACCTAAATCTGCCGCTAATCAAACCCTAACAGCCAGTTCATCAGCCGGCGGAGGAATCGCCGCCGCCGTCGCGTGTCGCCAGACGCAGGTTAAGGATGGGACTAAGAAGAAGGACGTCGTGGTCAAAGGCAAAGAGAGTCAAACTCCTCCGACTGAGTCTCGCTCTGCCGGTTCGAAGAAATTGACGGCGGCGGCGGCGGCGGCGGAGGGGAAGGAATCTCCGTCGTCGTCTTCGGTTTCGCCGATTCTAGCGTCGTCGCTTGGGCTGAACAGGATAAAGACGAGATCGGGGCCGTTGCCGCAGGAGAGCTTCTTCGGGTTCAGGGGCGAGAAGGGGACGGCGGCGGCCGCGGCGGCGCTGGGAGCAAGTAACCTCTCCAGGCATGGTGGTCGTGGCAGTGATGGGAGTGGCGGGAAGAAGAAGGAGTCGATGAACCAGAACAGAGTAGGGTTTCACGAGGGTTCCGGCGCCACCGGAGCTTGGGTTGATAATGGGAGCAATTCTGATAGCATGTCGACGGGGAGTGTGCCGTCGAGGGAACAGAGCCCGATTGTGCTACCCCGGTCGCGGTTACAGAACGGCGAGTCGTCCTCTGAAGCAGGCAAACCAGCACCATCATGGGCTCAGTCTGGAGGCTTAAGAAGTACAGATGTTTGTACTCCAGAGACAGCATATGATTTTGAAAACCCAAAGGAATCAGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCTCCTAGGAAGAGGTTTCCGTCAGATATCAAAAGTTTTTCCCATGAGTTGAATTCGAAAGGTGTCTGGCCTTTTCCATTTTTGAAGCCTCGACGGTTAAATAACCTTGAGGGGATTTTAGTTGTTATCAGGGCAAAATTTGATAAAGCAAAGGAAGATGTGAACTCTGATTTGGCTATTTTTGCGGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAGACAATTGAGGACTTGTTAGTTTTGGCTAGGAGCTGTGCAATGACTTCACCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCATCCTCCAGGGATGCTAAAACAGCTTCACACTCGAATGCTTTTCATTCTAACAAGGTGTACTAGATTATTGCAATTCCACAAGGAAAGTGGTTTGGCGGAGGATGAGCCTGTTTTCAATCTTCGTCAATCCAGAGTCTTGCATTCTGCTGAAAAATGTATTCCTCCTGGTGTGGGAAGGGATACTAAAAGTTCTAGTGCTGCAAAGACCATGAAGGCTTCAAATAAAAAAGCTTATAGTCAAGAGCAGGGTATGTTGGGTTGGAAGAAAGATGTTATGCAACCACAGAATCTAACACTTCCTGTCGATGATGACAGTTCAAAACACTTTGACTCTTCTTCAGGCAGAGATCGAATGGCTTCGTGGAAGAAATTCCCATCTCCGTCAGGAAGAAGCCCCAAAGAACCTGCTGGAAGGGTTGAATCTTCAAAGGCATCAAATAATAAGAGATTCACTTCTGATGTGGATCTCTCTAATGCCAAACCACCTGAGCATCTTCCTGTCAAAGATTCCCTTGATCATGCTTCCAAACACCAACACAAAGTTTCCTGGGGATATTGGGGAGATCAGCCAAACAATAGTGAGGAGAGTTCAATAATTTGTCGTATATGTGAAGAGGAAGTTCCTACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCCGATAGATGTGATCAAAAGGGACTGAGTGTCAATGAGCGTCTTGTCAGAATTGCTGAAACACTTGAAAAGATGATGGAATCATGTACGCAGAAGGATACCCAACAAATGGTGGGAAGTCCTGATGTTGCAAAAGTGTCAAACTCAAGCATGACTGAAGAATCTGATGTTCCTTCCCCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGAGGACATGCTAGACTGTTTCCCTGAAACTGATAATTCTGTGTTTATGGATGACCTAAAGGGATTACCACTTATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCGGCAGGGAGCATGACTCCTAGGTCTCCTTTGATGACACCCAGGACAAGTCAGATTGACTTGCTCTTGGCCGGGAAGGTTGCTTATTCTGAACACGATGATCTGCCACAGATGAATGAACTTGCTGATATAGCACGATGTGTGGCAAATGCACCTCTGGATGATGACCGCACAACATCATATTTATTATCTTGTCTTGATGATTTACGAATTGTTGTAGAACGAAGGAAATTTGATGCACTTACTGTGGAGACTTTTGGAACACGTATCGAGAAGCTGATACGAGAGAAGTATCTGCAGCTCACTGAGATGGTGGATGTTGAAAAGATAGATACGGAGAGCACTGTTGATGATGATCTGTTGGAAGAAGATGTGATTCGTAGCTTGAGAACAAGCCCGATTCATTCTTCAAGGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAAAAGAGAACAACTGGTGATCTTTTTGCCATAAAGGTTCTCAAGAAGGCAGATATGATCCGAAAGAATGCTGTGGAAAGTATATTAGCAGAGCGTGATATCTTAATTACCGTACGCAATCCTTTTGTGGTTCGATTCTTCTATTCTTTTACGTGTCGTGAGAACTTATATCTTGTCATGGAGTATCTGAATGGAGGTGACCTGTATTCATTATTAAGGAATTTAGGTTGCCTAGATGAGGAAGTTGCCCGTGTATATATTGCGGAAGTGGTGCTTGCATTAGAGTATCTGCATTCACTGCGCGTGGTTCATCGTGACTTGAAGCCTGACAATTTATTGATAGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTCATCAACAGCACAGATGATTTGTCTGGTCCAGCAGTGAATGGGACATCCCTACTTGGAGATGATGAACCTCATGTATTTACATCTGAGGATCAAATGGAAAGAAGGAAGAAACGTTCAGCAGTGGGCACGCCTGATTACTTAGCACCAGAGATACTTTTGGGAACTGGACATGGGTATACTGCCGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGAAGAAATGAGTCCTGAAGCACAGGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAAAGACTAGGAGCGAAAGGGGCATCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTACTTCTGAGAGTGCTTTAGATACTAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGGCTAGTATATCCAGCTAGTGATGTTGAGGATTCTAGTGATGCCGATAGTTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGTCAAGATGAAGGAGATGAATGTGGGGGTCTAGCTGAGTTTGATTCTAGCTCATCTGTCAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCTCAGCTTGCATCAATCAACTATGATCTCACCAAGGGATGGAAAGATGATCCGCCAGCCAATTCTAGTGCATAG 3885 0.4505 MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKPKSAANQTLTASSSAGGGIAAAVACRQTQVKDGTKKKDVVVKGKESQTPPTESRSAGSKKLTAAAAAAEGKESPSSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTAAAAAALGASNLSRHGGRGSDGSGGKKKESMNQNRVGFHEGSGATGAWVDNGSNSDSMSTGSVPSREQSPIVLPRSRLQNGESSSEAGKPAPSWAQSGGLRSTDVCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFLKPRRLNNLEGILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSPGEFWLQCESIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAEKCIPPGVGRDTKSSSAAKTMKASNKKAYSQEQGMLGWKKDVMQPQNLTLPVDDDSSKHFDSSSGRDRMASWKKFPSPSGRSPKEPAGRVESSKASNNKRFTSDVDLSNAKPPEHLPVKDSLDHASKHQHKVSWGYWGDQPNNSEESSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNERLVRIAETLEKMMESCTQKDTQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSEDMLDCFPETDNSVFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKVAYSEHDDLPQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRIVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDLLEEDVIRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLGDDEPHVFTSEDQMERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPAVPEEMSPEAQDLIDRLLTEDPNQRLGAKGASEVKQHVFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNTSDGLVYPASDVEDSSDADSLSGSSSCLSNRQDEGDECGGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPANSSA* 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0982 1294 ProSiteProfiles Protein kinase domain profile. 884 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0982 1294 MobiDBLite consensus disorder prediction 1223 1240 - -
Apr6g0982 1294 Pfam Protein kinase domain 884 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0982 1294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1003 1015 IPR008271 GO:0004672|GO:0006468
Apr6g0982 1294 CDD STKc_MAST_like 890 1178 - -
Apr6g0982 1294 SUPERFAMILY Protein kinase-like (PK-like) 881 1213 IPR011009 -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 656 685 - -
Apr6g0982 1294 Gene3D Transferase(Phosphotransferase) domain 1 968 1191 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 457 485 - -
Apr6g0982 1294 Gene3D Phosphorylase Kinase; domain 1 882 1202 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 9 32 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 158 255 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 545 559 - -
Apr6g0982 1294 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 29 1292 - -
Apr6g0982 1294 SMART serkin_6 884 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0982 1294 MobiDBLite consensus disorder prediction 1218 1240 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 127 146 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 502 578 - -
Apr6g0982 1294 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 1292 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 467 485 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 200 255 - -
Apr6g0982 1294 ProSiteProfiles AGC-kinase C-terminal domain profile. 1174 1277 IPR000961 GO:0004674|GO:0005524|GO:0006468
Apr6g0982 1294 MobiDBLite consensus disorder prediction 656 694 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 729 750 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 1 122 - -
Apr6g0982 1294 MobiDBLite consensus disorder prediction 508 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0982 Apr-Chr6 14428360 14440767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0982 1 1288 AGC Kinase Gene Family AT3G17850 66.413 0.0 1623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Apr6g0982 Pkinase 7.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0982 - - gmx:100776995 2131.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0982 6 14428360 14440767 Apr6g0982 6 14428360 14440767 ECH