Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0981 ATGAAGAAACATCATCAACAAAATGTTTCTCACAAATTCTTACCAAGCACAATCCTCATTCTTCTCTTCTGCTTCTTCCCTTTCGCCAAACCCGATCTCACGTCGGAGCGTGCCGCACTCTTAACCCTCCGTTCCGCCGTCCGCGGCAGAACCCTTCTCTGGAATGCCTCGTCATCTTCGCCGTGCATTTGGCCCGGTGTTCAATGTGACGTCAGCAATGTCACCGTCGTTGAACTTCACCTCCCTGCTGTTGCACTTTCCGGCGAGCTTCCCGCCGGCGTGTTCTCCAAGCTCCCCAACCTCCACACTCTCAGCCTCCGTGTCAATGCTCTCTCCGGCGTCCTCCCCGCCGATCTCGCTTCCTGCGTCAAGCTCCGGAACTTTTATCTGCAGCGGAACGAATTCTCCGGCGAGGTTCCGGCGTTCTTCTCCGGCATGACTGGTTTGGTTCGGCTCAATTTGGCTTCAAACAACTTTTCCGGGCGGGTTCCGGTTGGATTCGGGAACTTGACCCGGTTGAGGACCCTTTTCCTTGAGAACAATAGGTTCACTGGGTCATTGCCCGAGTTGAAAGAGCTGAACGAGTTGGCTCAGTTCAATGTCTCCTACAACATGCTGAATGGGTCGGTGCCAAGAAAGTTGCAAACTTTCACTAAAGATTCGTTTTTGGGGAATACCCTTTGTGGGAAACCACTTGCATTGTGTCCTTGGGATGATGGTGGTAGTGAGAATGGTGCAAATGGGACTTCAAATTCAAGTGGGGTTGGAGGAGATGAAGGGAAGGTGATTGAAGGAGAGAGGAAGAAGAAGAGCAAGTTATCTGGGGGTGCCATTGCTGGTATTGTTATTGGGTGTGTGGTGGTTCTTTTGTTGGTTGTGTTTGCTTTGATTCTATTGTGTAGGAACAAGAGTGGTAGCAAGACTAGGAGTGTTGATAGCATAGTGACAATGAAGCAGCAAGAGAAGCATGATGGTGGTGAGGTGGGAATTGAGGGTGAGAATGTGGAGAGTGGTGATGGGAATGGGAATAATGGGTATTCGGTGGCGGCGGCGGCGGTGGCGGCGATGAGTGGGAGTGGTGGTGGAAGGGGTGAAGGTGGTGGTGGTGGTGGTGGAGATAAGAAGTTGGTGTTTTTCGGGAATTCGGTGAAGGTGTTCGATTTGGAGGATCTGTTGAGGGCTTCTGCTGAGGTTTTGGGGAAAGGGACTTATGGGACTGCATATAAAGCGGTTTTGGAGGATGGGCCTGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACCATTTCTGAGAAGGAATTCAAGGAGAAGATTGAAGGGGTTGGAGCAATGGATCATGAAAATTTGGTACCTCTAAGGGCTTACTATTATAGCAGAGATGAGAAGCTTCTTGTTCATGATTACATGCCAATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGGGCAGGTAGGACACCATTGAATTGGGAAATGAGATCAAGCATTGCACTCGGAGCAGCTCGTGGCATTGAGTATCTTCATTCACAAGGGCCTAATGTGTCTCATGGGAACATAAAGTCATCAAACATCCTCCTAACCAAGTCCTATGATCCAAAGGTATCGGATTTTGGCCTTGCACAACTTGTTGGTCCTTCATCATCCACACCTAACAGGGTTGCTGGATACCGTGCTCCTGAAGTAACCGATCCTCGCAAAGTATCTCAGAAAGCTGATGTGTATAGTTTTGGTGTTTTGCTTTTGGAACTTCTTACTGGAAAGGCTCCCACACATGCCCTTTTGAATGAGGAAGGAGTGGACCTCCCAAGATGGGTGCAATCAGTTGTTAGAGAAGAGTGGACTTCAGAGGTGTTTGATATTGAGCTATTAAGGTATCATAATGTTGAAGAGGAAATGGTTCAATTGTTGCAACTTGCGGTGGATTGTGCTGCTACATACCCTGATAACCGCCCTTCAATGTCTCAAGTGAGACAACGCATAGAAGAGTTATGTAGGTCTAGCTTGAAAGAGGGTACTCAAGATCAAACCCAACAATCTGATTTTATCAATGATATAGATGATGTGTCTTCTAGATGA 2076 0.4812 MKKHHQQNVSHKFLPSTILILLFCFFPFAKPDLTSERAALLTLRSAVRGRTLLWNASSSSPCIWPGVQCDVSNVTVVELHLPAVALSGELPAGVFSKLPNLHTLSLRVNALSGVLPADLASCVKLRNFYLQRNEFSGEVPAFFSGMTGLVRLNLASNNFSGRVPVGFGNLTRLRTLFLENNRFTGSLPELKELNELAQFNVSYNMLNGSVPRKLQTFTKDSFLGNTLCGKPLALCPWDDGGSENGANGTSNSSGVGGDEGKVIEGERKKKSKLSGGAIAGIVIGCVVVLLLVVFALILLCRNKSGSKTRSVDSIVTMKQQEKHDGGEVGIEGENVESGDGNGNNGYSVAAAAVAAMSGSGGGRGEGGGGGGGDKKLVFFGNSVKVFDLEDLLRASAEVLGKGTYGTAYKAVLEDGPVVAVKRLKDVTISEKEFKEKIEGVGAMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNKGAGRTPLNWEMRSSIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDPKVSDFGLAQLVGPSSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDIELLRYHNVEEEMVQLLQLAVDCAATYPDNRPSMSQVRQRIEELCRSSLKEGTQDQTQQSDFINDIDDVSSR* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0981 691 MobiDBLite consensus disorder prediction 669 691 - -
Apr6g0981 691 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Apr6g0981 691 Gene3D Ribonuclease Inhibitor 35 145 IPR032675 -
Apr6g0981 691 Pfam Leucine rich repeat 141 183 IPR001611 GO:0005515
Apr6g0981 691 Gene3D Transferase(Phosphotransferase) domain 1 468 689 - -
Apr6g0981 691 Gene3D Phosphorylase Kinase; domain 1 372 467 - -
Apr6g0981 691 MobiDBLite consensus disorder prediction 668 691 - -
Apr6g0981 691 SUPERFAMILY Protein kinase-like (PK-like) 397 660 IPR011009 -
Apr6g0981 691 CDD STKc_IRAK 399 663 - -
Apr6g0981 691 Pfam Protein kinase domain 396 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0981 691 ProSiteProfiles Protein kinase domain profile. 393 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0981 691 Pfam Leucine rich repeat N-terminal domain 35 70 IPR013210 -
Apr6g0981 691 Gene3D Ribonuclease Inhibitor 146 235 IPR032675 -
Apr6g0981 691 PANTHER OS05G0588300 PROTEIN 10 691 - -
Apr6g0981 691 SUPERFAMILY L domain-like 52 216 - -
Apr6g0981 691 ProSiteProfiles Leucine-rich repeat profile. 172 194 IPR001611 GO:0005515
Apr6g0981 691 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0981 Apr-Chr6 14414152 14416954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0981 32 663 Receptor kinase-like Gene Family AT1G48480 62.303 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr6g0981 Pkinase 4.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0981 - - gmx:100781597 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0981 6 14414152 14416954 Apr2g1256 2 18815486 18819327 ECH
Apr6g0981 6 14414152 14416954 Apr6g0981 6 14414152 14416954 ECH
Apr2g1596 2 21712456 21715265 Apr6g0981 6 14414152 14416954 PCT