Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0979 ATGTGTTGCAAACCACGGTGTACCTTTTGCTACATCTATTGCACAATCTTTGCCATTGTGTTCATCATCATATTTTCCAGCATCATCTTTTGGATAATCATCTCACCCTCCAATGTCAAGTTCTACATAACCGAGGCCTCCCTCACACAATTCAACCTCACAAGCAACAACACCTTATATTACAACTTCAAGGTAAACATCACAGTTAGAAACCCCAACAAAAACATCATAGTATACTATAGGGGTATCAAAGCAATTGCGTGGTACAAAGATAATGACTTCGGTTGGGTGAACTTAACACCCTTTGACCAAGGTCACAAGAATACAAGCTTCCTTCAAGCAGTGTTTAATGGGCAAAGTGTGATTAAGCTCAAAGCTCAACAACTTGGTGAGTACAAGGAAGAGACAAGTGTTGGGATTTACAATGACTTAGCTGTGGATTTGGATCTTAGAATTAGAGCTAAGTATGGAAGGTTTAAGAGTAGTCGTTTCAATCCACCGATTGTGCAATGTCGTCGTTTGAGTGTTCCTTTGATTTCTAATGGTAAATCAGCACCTCCTTTTAGTGTCACCAAATGTAAAACTGGTTCTTTCTTTGTAGATCGTGATGCTGATGCAGGAGCAGCTTGA 630 0.3984 MCCKPRCTFCYIYCTIFAIVFIIIFSSIIFWIIISPSNVKFYITEASLTQFNLTSNNTLYYNFKVNITVRNPNKNIIVYYRGIKAIAWYKDNDFGWVNLTPFDQGHKNTSFLQAVFNGQSVIKLKAQQLGEYKEETSVGIYNDLAVDLDLRIRAKYGRFKSSRFNPPIVQCRRLSVPLISNGKSAPPFSVTKCKTGSFFVDRDADAGAA* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0979 209 Pfam Late embryogenesis abundant protein 66 164 IPR004864 -
Apr6g0979 209 PANTHER HARPIN-INDUCED 1 18 199 - -
Apr6g0979 209 PANTHER OS05G0367900 PROTEIN 18 199 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0979 Apr-Chr6 14397493 14398122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0979 33 178 SNARE and Associated Proteins AT1G32270 29.932 2.06e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0979 - - gmx:100784278 327.02