Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0978 ATGTCTTGCAAAGCCAGATGCAACTTCTGCTGCATTTGCTGCATCTCCAGCACAATCTATGCCATTATTTTCATCTTGGTACTTTTCTCCATCATCTTTTGGATAGTGATCTCACCCTCAAATGTGACGTTCGGTGTAACTGAGGCCTCCCTCACACAATTCAACCTCACAAGCAACAACACCTTATATTACAACTTCAAAGTCAACATCACAGTGATAAATCCCAACAACAACGTCATAGTGTACTATAGGGGTATCAAAGCAATTGCATGGTACAAAGATAATGACTTTGCATGGGTGAACTTAACACCCTTTGACCAAGGTCACAAGAATACAAGCTTCCTTCAAGCTGTGTTTAATGGGCAAAGTGTGATTAAGCTCAAAGATAAACAACTTGGTCAGTATAAAGAAGAGACAAATGTTGGGATTTACAGTGACTTAGCTGTGGATTTGGATCTTAGAATCAGAGCTAAGTTAGGAAGGTTTAAGAGTAGTCGTTTCAATCCACCAATTGTGCAGTGTCGTCGCTTGAGAGTTCCTTTGATTTCCAATGGAAAATCAACACCTACTTTCAATGTCACCCAATGCAGCACTGGTTCTTTCTTTGTAGATCGTGATGCATCATGA 627 0.4019 MSCKARCNFCCICCISSTIYAIIFILVLFSIIFWIVISPSNVTFGVTEASLTQFNLTSNNTLYYNFKVNITVINPNNNVIVYYRGIKAIAWYKDNDFAWVNLTPFDQGHKNTSFLQAVFNGQSVIKLKDKQLGQYKEETNVGIYSDLAVDLDLRIRAKLGRFKSSRFNPPIVQCRRLRVPLISNGKSTPTFNVTQCSTGSFFVDRDAS* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0978 208 PANTHER HARPIN-INDUCED 1 21 201 - -
Apr6g0978 208 PANTHER OS05G0367900 PROTEIN 21 201 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0978 Apr-Chr6 14381674 14382300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0978 36 181 SNARE and Associated Proteins AT1G32270 28.767 1.01e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0978 - - gmx:100784278 298.516