Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0973 ATGGAATCTAAGAGGCCTAACACTATTGTTGACAACTACAACCATGAAGATCACCAACAACAACAACAAGAGGAGGAAAACAATGAGATCCTCAAGAGAAGAATCTCTAGCCACCCCCTCTACGGTTTGCTTGTTGAAGCTCACTTAGATTGTTTGAAGGTTGGAGACATTTCAAACTTGGACAATGAGCTGAAAATGGATCAGATGCAAGCAACCAAGAAACAAAACCTGGGCATGTTCAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGCTTGGCACTTGGGAAGCTTAAAGAAGCAATGGAAGAGCCACAACAGAAGTCCATGACTTTCATAAACAACATGCATTCACAACTTAGGGAGCTCACTAAAGCAACAATGGCTACACCTACTGAACCAGCAGCTACAACATCTTCTAGTGAGTGCAAATTCAGAAGAAACCCTGCAATTTAG 459 0.4205 MESKRPNTIVDNYNHEDHQQQQQEEENNEILKRRISSHPLYGLLVEAHLDCLKVGDISNLDNELKMDQMQATKKQNLGMFSQSELDLFMEAYCLALGKLKEAMEEPQQKSMTFINNMHSQLRELTKATMATPTEPAATTSSSECKFRRNPAI* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0973 152 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 15 123 - -
Apr6g0973 152 SMART KNOX2_2 75 126 IPR005541 GO:0003677|GO:0005634
Apr6g0973 152 Pfam KNOX2 domain 83 125 IPR005541 GO:0003677|GO:0005634
Apr6g0973 152 MobiDBLite consensus disorder prediction 132 146 - -
Apr6g0973 152 MobiDBLite consensus disorder prediction 1 27 - -
Apr6g0973 152 MobiDBLite consensus disorder prediction 132 152 - -
Apr6g0973 152 SMART KNOX1_2 29 69 IPR005540 GO:0003677|GO:0005634
Apr6g0973 152 Pfam KNOX1 domain 31 55 IPR005540 GO:0003677|GO:0005634
Apr6g0973 152 PANTHER FUSED COMPOUND LEAF 1 15 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0973 Apr-Chr6 14301558 14306313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0973 29 129 Homeobox Transcription Factor Family AT4G08150 36.111 2.60e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0973 - - gmx:100790124 216.853