Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0955 ATGGATGGTGATAACGGTCTTAACATACGTAATTGGGGTTACTATGAGCCCGCCACGTCATTTAAGAGTCATTTGGGGCTGCAACTGATGTCGTCTGTGCCGGAAAAACCGATGCTTGGAGGTCGCAATGCTGCTGTATTATCTGGCACTAATGGGCCATTTCACCATAGGGACATTGGTATGCCCTCAGCTTCATACTCTATGGAATACATGAGGGATGCGTGGATTAGTAGTCAAAGAGAGAAGTACATGAATATGATACCTACAAACCATAATTATAGTAGTATGCCGGAGACATCTTCGGCACATCAAATGCAAATGATTCAACCACCTGAATTGCCGAAGGAAGAAAAGCCGGCAGAAGAGGCACCTGCTGTTGAGAAGGCGAGTGGAACACGTAAGAAAAGACAGGGGCCCAAGGTGCCGAAATCTCCCAAGGCGAAGAAGCCCAAAAGGGGGCCTCGCATGCCAAAGGATGAGAATGCTCCCTCAGTTCAACGAGCAAGGGTTCCGAAGAAAACTACTGAAATTGTGATAAACGGGATTGATATGGATATTTCTAGTATCCCAATTCCTGTTTGTTCATGCACTGGGTCACCTCAACAGTGTTATAGATGGGGCTCTGGTGGGTGGCAATCTGCATGCTGCACGACAGGCATGTCAGTGTATCCTTTGCCTATGAGTACAAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAGCTTGCAGCTGAGGGTTATAACTTTTCTAATCCCATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGGTAG 849 0.4582 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSVPEKPMLGGRNAAVLSGTNGPFHHRDIGMPSASYSMEYMRDAWISSQREKYMNMIPTNHNYSSMPETSSAHQMQMIQPPELPKEEKPAEEAPAVEKASGTRKKRQGPKVPKSPKAKKPKRGPRMPKDENAPSVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGSPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0955 282 MobiDBLite consensus disorder prediction 90 107 - -
Apr6g0955 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
Apr6g0955 282 MobiDBLite consensus disorder prediction 90 170 - -
Apr6g0955 282 MobiDBLite consensus disorder prediction 135 152 - -
Apr6g0955 282 MobiDBLite consensus disorder prediction 114 134 - -
Apr6g0955 282 PANTHER - 1 282 IPR010409 -
Apr6g0955 282 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 282 - -
Apr6g0955 282 SMART GAGA_bind_2 1 282 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0955 Apr-Chr6 14124139 14133343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0955 1 282 BBR or BPC Transcription factor family AT2G01930 51.351 7.89e-97 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Apr6g0955 GAGA_bind 9.3e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0955 - - gmx:606296 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0955 6 14124139 14133343 Apr6g0955 6 14124139 14133343 ECH