Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0946 ATGGCAGACACAAATTCAGTTGAGGTGATTTTGGAATTTCTGAGGAGGAATCGGTTCACACGAGCCGAGGCAGCTTTGCGCAGTGAGCTCAGTAACTGTTCTGATGTGAATGGGTTCCTTCAGAAGCTCACGTTGGAAGAAAAGGACTTGTGTGGTATGCTGCAGAAGGATAAGGGGAAGCCTGTGGTAGGGAATCAAGGATTGGATTGTCGTGACAGTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAGTGTGGGAATGGTAGAAATGCTGCTGAAGGCAAATGTAAAACTGCTGCTCCTACTGTGGAAAGGAATAAACCTGATGAAATGGTTGGGACAAGTGATAAAAACTTCACTTTTTCCAAGAGTTCGGGGGACAATGTTCTTGATTTATACTCATGGAAGTTGAATCTCAGCAATGGTCCCGTGGAGTCTTACCAAAACGACGGTGGAAGTAGGCCTAATAATACTTCGAATGCCCCGATATCACAACAATCAAAATATCAAACAGGTGAAGGTCTTGATGCAGCAAACATTAACGCAAAATCTAAGGAGGAAAATAAGGTGTCTGTTGAAAAAACATCCTTGTGGCTTGGAAGTGATGGAAAAGTGTCTACGGAACCAAAGTATGACCTTATGCAAAACAAAGAACCTTGGGAACTTGACCGACAGCTTAAGTTTAAAAGTTCATCTCTGAAAGAGAACTTGACGGATAATGTTTTGTCAAGAACTGATGAGAATGTGAATTCATCTTCTGATCTATGGAAAGATTGTTCTGTCAAGACTGTTTTCCCTTTCTCGAAGGGGGATATGTCTACAAGTTATAATAACAGTTCAACTTATTCAGACAAAAAAGAGGAAAAGAGAAGGGCTGAAATCAGTGATGATAGGGCATCAATAAAAGAACAAGTGGATGAAGTGGGAAGAGCTCTTTACTTAGGGAAGTTGCAAGGCAGTTCTGGCAGCTTAAGTTTTCCTCTTGGACCGGAGAATCAAAAGGAAGAGTTTCCTAGGCTTCCTCCTGTAAAAATCAAGTCAGAAGATAAATTGACTCTTAATTGGGGGGAGAAGTTTGAGTGTGATGGACTGGCTGCGAAACTTGCTGGCGTTGACAACACATTACTTATTGGGTCATATCTAGATGTTCCTATTGGACAAGAAATTAAAACTACAGGAATGAGGAAGGCTATTGGGGGCAGTTGGCTTTCTGTAAGTCAAGGGATTTCAGAGGATACATCTGATCTTGTATCAGGTTTTGCAACAGTCGGGGATGGGTTGAGTGAATCTGTTGATTATCCTAATGAATATTGGGACTCTGATGAATATGACGACGAGGATGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCACATGAAATTGATTACCCTAGTGACAACGAGAAGGGGACTGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAAGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGTGAGCAATATCTTCAAGCAAAGAATGTTGAGCCAGTCACAGGTTCAGATGATCATATTGGTCTAACGATTAAGGAAATGTATGGAAGAACTAATGGTAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGTTGAAGAACTGAATCTAATGCATATGGAATCTGTCAGACCGGGCTTTGTCACTCAGAAAAATGATCTCATCTTGCTCGGAGATGGGAAGGTTCTCAATCATAGTGGAAGGTCACGAATAGAGGACATGGAAGATGATCAGCATGGTTCAGTTAGATCAATTGGGGTGGGGATCAACAGTGATGCTGCTGATATTGGCAGTGAAGTACATGGAAGTTTGGTTGGTGGTAGTAGTGAGGGGGATTTAGAATATTACCGAGATCATGATACTACGCTTGGTGGCTCCAAACAATCTCATCATGATTTGGATAAGAATTCTATTAACAAGTCCTTCAAAAATAATAAGAAAAATGACAGGATTGAGTCAAATAAATATGTCATTGACAGTAATAGAGATGCATGCTCACAGGTAAAAACACACACTGATGCAAACTTCTCATTTCCTCAATCTTTTAGAGAGGGCCAGATGATTCAAGTTGGCTCCAGTAAGTCCCTATGGTCAAGTAATTGTAATGTAGATGAAACAGATGACTGTATTAATGCATTTGTGGGATCTGATGACATGCTTTCATCTTGGAGGCGGAAGAGTAGTGATTCTTCACCTGTTAAAAGTTGTAGGGATGAGAGTAATGCTATTGTGGTAAGATCCGCAAACTCTTCTCCAACTACAGTCTCAAATAATGGGTATACAGATAGAGAGCATGTTAAGATAGAAAAGGATGAAAAGGTTAGCATTGTAAGGGAAGATGATCTAGGTGCATCACTAGAGGATGAAGAGGCAGCTGCTGTGCAAGAGCAGGTAAGGCAAATAATGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGAAAAAACAGAACTGGCTTTGAAGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGCGCTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGATCTGCACACTGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGATTTCTTTGACCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGCAGACAAGTATCACATTCTGAGACTATATGATTACTTCTATTATAGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCCAACTTATATGAGTTTCATAAATTTAATCGAGAATCAGGGGGGGAAGTGTACTTCACGATGCCAAGATTGCAGTCAATTACCATTCAATGTTTGGAAGCACTTCAGTTTTTGCATAGCCTTGGACTAATACATTGTGACTTGAAGCCAGAGAATATATTGGTTAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACGGATCACCTTTGCTCATATGTCCAGTCCAGGTCTTATCGTGCTCCTGAGGTTATCTTGGGGCTTCCATATGACAAGAAAATTGATATCTGGTCACTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGACTCCCCCGCAACATTACTTGCTCGGGTGATTGGGATCATTGGCCCAATTGATCAAAGTTTGCTTGCTAAAGGACGGGATACTCATAAGTACTTCTCAAAAAATCATATGCTTTATGAACGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCGAAAAAGACATCTTTGAGGCATAGATTGCCAATGGGGGACCAAGGCTTCATTGATTTTGTAGCTCATTTGCTTGAGGTTAACCCGAAGAAACGGCCTTCTGCATCTGATGCCCTGAAGCACCCGTGGTTATCATACCCTTATGAACCAATATCATCTTGA 3537 0.4066 MADTNSVEVILEFLRRNRFTRAEAALRSELSNCSDVNGFLQKLTLEEKDLCGMLQKDKGKPVVGNQGLDCRDSVEVSKELIVKEIECGNGRNAAEGKCKTAAPTVERNKPDEMVGTSDKNFTFSKSSGDNVLDLYSWKLNLSNGPVESYQNDGGSRPNNTSNAPISQQSKYQTGEGLDAANINAKSKEENKVSVEKTSLWLGSDGKVSTEPKYDLMQNKEPWELDRQLKFKSSSLKENLTDNVLSRTDENVNSSSDLWKDCSVKTVFPFSKGDMSTSYNNSSTYSDKKEEKRRAEISDDRASIKEQVDEVGRALYLGKLQGSSGSLSFPLGPENQKEEFPRLPPVKIKSEDKLTLNWGEKFECDGLAAKLAGVDNTLLIGSYLDVPIGQEIKTTGMRKAIGGSWLSVSQGISEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDEDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGEQYLQAKNVEPVTGSDDHIGLTIKEMYGRTNGNDLMAQYDGQLMDVEELNLMHMESVRPGFVTQKNDLILLGDGKVLNHSGRSRIEDMEDDQHGSVRSIGVGINSDAADIGSEVHGSLVGGSSEGDLEYYRDHDTTLGGSKQSHHDLDKNSINKSFKNNKKNDRIESNKYVIDSNRDACSQVKTHTDANFSFPQSFREGQMIQVGSSKSLWSSNCNVDETDDCINAFVGSDDMLSSWRRKSSDSSPVKSCRDESNAIVVRSANSSPTTVSNNGYTDREHVKIEKDEKVSIVREDDLGASLEDEEAAAVQEQVRQIMAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSLLAKGRDTHKYFSKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASDALKHPWLSYPYEPISS* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0946 1178 MobiDBLite consensus disorder prediction 146 166 - -
Apr6g0946 1178 MobiDBLite consensus disorder prediction 284 299 - -
Apr6g0946 1178 Gene3D Phosphorylase Kinase; domain 1 861 948 - -
Apr6g0946 1178 SUPERFAMILY Protein kinase-like (PK-like) 856 1171 IPR011009 -
Apr6g0946 1178 Pfam Protein kinase domain 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0946 1178 PANTHER - 2 1176 - -
Apr6g0946 1178 MobiDBLite consensus disorder prediction 474 504 - -
Apr6g0946 1178 Coils Coil 177 197 - -
Apr6g0946 1178 Gene3D Transferase(Phosphotransferase) domain 1 921 1169 - -
Apr6g0946 1178 MobiDBLite consensus disorder prediction 276 299 - -
Apr6g0946 1178 ProSiteProfiles Protein kinase domain profile. 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0946 1178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 993 1005 IPR008271 GO:0004672|GO:0006468
Apr6g0946 1178 MobiDBLite consensus disorder prediction 641 671 - -
Apr6g0946 1178 CDD PKc_DYRK_like 867 1169 - -
Apr6g0946 1178 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1176 - -
Apr6g0946 1178 SMART serkin_6 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0946 Apr-Chr6 14036279 14043966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0946 866 1164 MAP Kinase Gene Family AT5G19010 30.408 9.36e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Apr6g0946 Pkinase 2.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0946 - - gmx:100798608 2063.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0946 6 14036279 14043966 Apr6g0946 6 14036279 14043966 ECH
Apr2g1611 2 21861188 21871479 Apr6g0946 6 14036279 14043966 PCT