Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0942 ATGAATGCATCGACGAGGAAAAAGGTTCAGAGAAAGTGCAAAATCAGAGGCTACAACCTCAAAGTTGATGCTCTCGACGAGATCCTATCCTTCGTCACTCGCTTCGAAGGCCCCGACGAAGACGAAGCCATCGATCTCCTCCTCGATCAGATCGAACACGAATCTCGTAAAATTGCAGTGAAATCTACCATAATCGACAAGGAGCCAGTGCACCGCGTGGTGAGCCTGCTATTGGAAGCTGAGGCTGCGGTGGAGGAAACTTCGGATGCCTTTGCTGCCGCTTCGGCCATTCGCGTTGTCGACGCGTTCCTGATCCCCAAGTTTAAATACGATCCTATCAGAAAACTGTTCTATGAGCATACAGGCAGCTTACCTATTCATGGAGAAGCATCAGCAAAAGCAGCTCTGTACAGGGATAGGTTTCTATTCTTGTCCCAGAGGCTCTCTCGTGACCAACATTTTTCGAAGCCAGCTTTTGAATCTGAATTTTCTCATTTTGGGAGCTGTGAGATATCTCCTATTCAATCTCTGGTTGGACAAACAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGCCATTTCTATTTGGAAGACCTTACCGCTTCAAACACCATAGTTGTGGCCGAAGGGGAGATGCTTGTGGAGGGTATTTTTCAGGTCTTAACATGTGGATTTCCTCCATTGGAGGAAAGAGATAAATCACTTAAACTACTTGCAGGGCATGACTTTTTTGGTGGTGGTACTTTTACCAAAGAGGAAACCATCAGACTGGCAGAGATGGAGAAAAGAGCAGTCAATGACATGTTTGTGATACTTTCTGATATTTGGCTTGACAATGAAGAGGCTTTGGGAAAGCTAGAGACTGTTCTGGATGGTTTTGAGAGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGGAACTTCTCTTCTAGGCCATGTAACCTCTCATTTCATTCTTATTCCAGCCTCAGGATGCAGTTTGGTAAGCTAGGGCAAATGATTGCTGCCCATCCACGGCTAAAAGAGCACAGTCGATTTCTGTTTATTCCAGGTCCTGATGATGCAGGTCCTTCAACAGTTCTTCCTAGGTGTGCTCTACCAAAATATTTAACCGAGGAACTCCAAAAGCACATTCCTGATGCCATATTTTCAAGCAACCCGTGCAGGATCAAATTCTATACCCAAGAAATTGTATTTTTCCGCCAGGATATGCTGTATAGAATGCGTCGCTCTTGTTTGATGCCTCCTTCTAAGGAAGAGACTGATGATCATTTTCAGCATCTTGTTGCTACCATAACCCATCAGAGTCATCTCTGTCCACTTCCTCTAACTGTACAACCCATCATCTGGAATTATGACCATTGCCTATATCTTTATCCAACTCCACATACGATAGTCTTGGGTGACAGAAGTCAGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTTAATACTGGTTCCTTCTCAATTGACAGCACATTTGTGGCGTACCGTCCTTGCTCTCAGGAAGTTGAATTGTCAGCCTTGTAA 1548 0.4464 MNASTRKKVQRKCKIRGYNLKVDALDEILSFVTRFEGPDEDEAIDLLLDQIEHESRKIAVKSTIIDKEPVHRVVSLLLEAEAAVEETSDAFAAASAIRVVDAFLIPKFKYDPIRKLFYEHTGSLPIHGEASAKAALYRDRFLFLSQRLSRDQHFSKPAFESEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHFYLEDLTASNTIVVAEGEMLVEGIFQVLTCGFPPLEERDKSLKLLAGHDFFGGGTFTKEETIRLAEMEKRAVNDMFVILSDIWLDNEEALGKLETVLDGFESVEVVPSLFVFMGNFSSRPCNLSFHSYSSLRMQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHIPDAIFSSNPCRIKFYTQEIVFFRQDMLYRMRRSCLMPPSKEETDDHFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0942 515 PIRSF DNA_pol_epsilon_2 1 515 IPR016266 GO:0003677|GO:0006261|GO:0008622
Apr6g0942 515 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 6 514 IPR016266 GO:0003677|GO:0006261|GO:0008622
Apr6g0942 515 Gene3D - 2 75 - -
Apr6g0942 515 Pfam DNA polymerase alpha/epsilon subunit B 273 478 IPR007185 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0942 16 472 Core DNA Replication Machinery Family AT5G22110 68.987 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0942 K02325 - gmx:100784116 887.1