Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0940 ATGGTGCTTGCTTCCACATGTGAAGACCCAAGTGAGGAATTGCAATCCACTTTTGGTTCCAGATATGTGCTTGAACCACTTCCTAAGTATAAGTTACCAGAGAAATCAATACCAAAGGATGCAGCATATCAAATAATAAATGGAGAGTTAATGTTGGATGGGACACCAAGACTCAACTTGGCTTCATTTGTGACGACATGGATGGAGCCTGAGTGTGATAAGCTCATTTTAGACTCTCTTAATAAGAACTTTGTTGATGTTGATGAATACCCTGTCACCACTGATCTACAGAATCGATGCGTGAATATTATAGCACACCTTTTCAATGCTCCTATTGGAGCAGAAGAAACTGCTGTGGGAGTGGGAACTGTGGGCTCATCAGAAGCAATAATGTTGGCTGGTTTAGCTTTCAAAAGGAAATGGCAGCAAAAGAGAAAATCACAGGGCAAACCTTATGACAAGCCCAACATTGTAACTGGGGCTAACGTTCAGGTTTGTTGGGAAAAATTTGCAAACTACTTTGAGGTTGAACTGAAGGAGGTGAAGCTGACAGAAGAATGCTTTGTGATGGACCCAGTGAAAGCAGTAGAAATGGTGGATGAGAACACCATTTGTGTTGCAGCCATTTTGGGGTCAACTATGAATGGAGAGTTTGAGGATGTGAAGCTTCTGAATGAACTTCTTACAAAGAAGAACAAAGAAACAGGTTGGAATACCCCAATTCATGTTGATGCTGCCAGTGGAGGATTCATTGCTCCATTTATCTACCCTCATCTTGTGTGGGATTTTCGTTTGCCATTAGTGAAGAGTATCAATGTTAGTGGTCACAAGTATGGTCTTGTCTACCCTGGTGTTGGTTGGGTTGTTTGGAGGAACAAAGATGAGTTACCTGATGACCTTATCTTTCACATCAACTATCTTGGCTCTGATCAACCCACTTTCACCCTCAATTTCTCCAAAGGCTCCAGTCAAATAATTTCTCAATATTACCAGTTCTTACGGCTTGGCTTCGAGGGTTACAAGAACATCATGAGCAATTGCTGGGAGAATGCCAAAGTGCTGAAGGAAGGGATAGAGAAAACAGGATTATTCAATATCCACTCTAAGGATATAGGGGTGCCCCTTGTGGCATTCTCTTTGAAAGACAGCAGCAAACACACTGTATTTGAGATATCAGATTCATTGAGGAAATATGGATGGATTGTTCCAGCCTACACCATGCCACCTGATGCAGAACACTTTGCTGTTCTTAGAGTGGTTGTGAGGGAGGATTTCAGTCGCGGCCTCGCCGACAGACTTGTTTCTGACATTGTTGAAGTTGTGAAACACTTGGAGGCAGTTTCTAGTGCTGTCTCCACCAAAGCTACTCGTGTCAAAGTTGTCACTAATGAGAAAGGTGAGAAGCTCAAAAAGAGAGCATTGGAGATCAGTTCAGAGATTGTAGATGTAGAGTGGAAGAGGCTCAAGGTTGGTAAAAAGAAGACAACTGGAGTATGCTAA 1500 0.424 MVLASTCEDPSEELQSTFGSRYVLEPLPKYKLPEKSIPKDAAYQIINGELMLDGTPRLNLASFVTTWMEPECDKLILDSLNKNFVDVDEYPVTTDLQNRCVNIIAHLFNAPIGAEETAVGVGTVGSSEAIMLAGLAFKRKWQQKRKSQGKPYDKPNIVTGANVQVCWEKFANYFEVELKEVKLTEECFVMDPVKAVEMVDENTICVAAILGSTMNGEFEDVKLLNELLTKKNKETGWNTPIHVDAASGGFIAPFIYPHLVWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRNKDELPDDLIFHINYLGSDQPTFTLNFSKGSSQIISQYYQFLRLGFEGYKNIMSNCWENAKVLKEGIEKTGLFNIHSKDIGVPLVAFSLKDSSKHTVFEISDSLRKYGWIVPAYTMPPDAEHFAVLRVVVREDFSRGLADRLVSDIVEVVKHLEAVSSAVSTKATRVKVVTNEKGEKLKKRALEISSEIVDVEWKRLKVGKKKTTGVC* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0940 499 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Apr6g0940 499 Gene3D - 361 447 - -
Apr6g0940 499 PANTHER GLUTAMATE DECARBOXYLASE 1 499 IPR010107 GO:0004351|GO:0006536|GO:0030170
Apr6g0940 499 Gene3D - 1 65 - -
Apr6g0940 499 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Apr6g0940 499 SUPERFAMILY PLP-dependent transferases 12 444 IPR015424 -
Apr6g0940 499 PANTHER GLUTAMATE DECARBOXYLASE 1 499 - -
Apr6g0940 499 Gene3D - 66 360 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0940 Apr-Chr6 13985524 13990731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0940 1 493 Calmodulin-binding Proteins AT3G17760 73.834 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0940 K01580 - gmx:100783047 806.979