Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0938 ATGGGAACAAAGAAGTTGTCTTCTCCATTCACAGTGGAAATAGGAACACAGGAAATGGCTTTCTCTGTGAAAAAGTACGATGTTTTTATCAGCTTCAGAGGTGAGGACACGCGTTCCAATTTCGTTAGCCATCTTCGCAATGCTCTCGATCGAGACCGCATCAAAACATACACGGATGAAGACAAACTTGGAAAAGGAGACCAGGTTTGGGCATCACTGTCCCAAGCAATTCAGGATTCACATGTTGCCATCGTCATTTTCTCCCAGAACTATGCTTTCTCAAAGTGGTGCTTGAAAGAACTGGTCAAAATACTGGAATGCAGAAAAAGTGAGGGGCTTATAGTTATTCCGGTGTTTTATGAAGTGGATCCATCGCACATAAGGAAGTTCACTGGAATTTTCAAGGAAGCAATGGCAAAACACGAGAAATTTTTTGGTGACAGAGATAATGAATCCATCAAAGAGTGGAAAGATGCTCTCATAGAAGCTTCCAATATATGTGGATGGGACTCTCGCACTCGTCTCTACAAGAACGAAGCTCAAATAATTGATAAAATTGTGGAAGATGTATTGGAGAAGCTGAACCAGAGATCCCCAATTGAACTAAAAGTGGAAGGCCTTGTCGGAATTGACAAAATTTGCGAAGAAGTTAAACTTTTGCTTTCAAGAAACCAAAAGAATCGGTTGCTACAAAATGTTAAAGTAATTAGAATTTGGGGCATGGGTGGGATTGGAAAGACAACAATTGCCAAAGCCTTGTTTTGTCAACTCTTTCCACAATATGACAGTGTGTGTTTCCTGGCAAATGTAAGAGAAGAATCAAAAAGGTTGGGCCTAATGTCTTTACGTGGTAAGCTTCTTTCTAAGCTACTTAAGAAAGAATATGAGGGTTCTGATGTTGCAGAATCCACATTCTATACAAGGAGACTGAATGATAAAAAGGTTTTGATTGTACTTGATGATGTGAATAGTTTAGATCAATTAGATGTGTTGTATAGAGAATGTAACTATGTGGGTCCAAATAGTAAAATCATTATAACAACCAGAGATAGGCATTTACTAATTAGTGCAAGTGTTGATGAGATATATGATGTCAAAATGTTGAACTTGGCCAAATCTCTAGAGCTTTTTAGTTTACATGCCTTCAAGGAAAGACATCCCCAAAAGGGATATGAGGATCTCTCAAGAAGAGCAGTGGCCTATGCTGGTGGAGTTCCATTAGCTTTGAAAATTTTGGGTTCAAATCTTTATTCCAGAAGTACACAATTTTGGGACAGTGAATTGAGCAAACTCATGAACTGCACCAATGACAGAATTCAAAGTGTGTTACAAGTGAGTTATGACGGATTAGACAGTCTAGAGAAGAAAATATTTCTAGACATTGCATTCTTTTTCAAAGGCGAAAATAAGGGTGACATCATAAGAATATTAGATGCCTGTGGTTTTGGTGCTACCAGTGGAGTAAATGTCCTTGAAGATAAAGCTCTTATAACTATTTCACTTTCTGGAACGATACAAATGCATGACTTGATACAAGAAATGGGTTTGAATATAGTTCGTGAAGGCATTGAAAATCCAAGAAAACGTAGTCGATTAAAAGATATTGAAGAAGTTCCTGACGTCCTTGGAAATAATAAGGGGAGTAATGCAGTTGAAGGTATAACATTAGATTTGTCTGAAATTGAGGATTTACAGGTGAATGCTGACGCATTGAGCATGATGACTAATTTAAGAATTCTTAAATTGTACGTCCCTTTTGGAAATCGATCAGGCAAGGTGCACTGGTCTGGTGTTCTTAGTAAATTGTCTGATAAATTGAGGTACCTTGAGTGGCATGGATACCCTTTGAAGTCTCTTCCAGCATCTTTTAGTGCAAAGAGGCTTGTTGAGATTCACATGAGGCATAGCAATCTTACAGAACTTTGGGAGGGGGTGCAGGATGTTGTGAATCTAGTGAGAATTAACCTGAGTAAATGCAAGCAATTGAAGAACCTGCCAGATTTGTCAAAGGCCTCAAAACTTGAACGGGTGGATCTGTATGGTTGTGAAAGTTTGGTGGCTGTTCATCCATCTGTGTTATCTCTGGACAAACTAAAAATTTTGGTACTAGATGAATGCAAAAATCTGAAGAGTCTTAAAAGTGGAAAGCATTTAAGATCTCTGGAGTGTATCTGTGTGGACGGTTGCACTAGTCTTAGGGAATTTTCAGTTTCCTCGGATTTAATCAAATGGTTGGATTTATGCAACACAGGAATCGAAACATTGGATTCATCAATTGAGCGTCTAAGAAATCTTAGAACACTGGATGTGCATGGTTTGAGATGCGGTTATCTTCCAAGTGAGTTATGTTTCCTGAAAGATCTGAGGGAGCTAAAGATTTGTAAGTGCAGAATAGCAATTGAGAAAGAGAATCTACATGTGATATTTGATGGCTTAGCATATCTTAAAGTGCTACACTTGAAGGATTGTTGTAACTTGTATGAGCTCCCTCACAACATCAGCACCTTAACAAACTTGCATGAGCTAAGACTTGATGGTAGCAGTGTGAAGACATTGCCCGAGAGCATCAAGCATCTAAAAAATCTTGAAACTCTGTCCTTAGAAAATTGCAGAAAGCTTGTCAGTATACCAGAGCTTCCCCCCAGTGTCACAATTCTGGAAGCGCAGAACTGCGTGTCATTGGTGAAAATACCCACTTTGGAGACTTTAACTTTTGAGATGAAAGGGAGGCGAAAATCGATTTGTTTCCAGAATTGCATGGGTCTTGATGAACCTAGGCTCCACTGCATCACAGAGGGTGCCTATATAGCTACCTACAATGCTGTGTTTCAAAGTAGACCTGTAAATAGATCACGAAAGAGTTGGAGACGCTCTATTTCATATCTGTCTGAAAATTGCTTTTTGAGTTACTGTATCCCTGGAAGAAGAGTTCCAGAGGAGTTCACATATAGAACAACACGGTCCTCCTTCAGTATTAATCTTCCTTCTTCAATTTCAGACTTTGCAGGCTTAATTTTTGGTGCAGTTCTTTCTCCCTCCCAACTCCAAGGAACGAAGACCCGTATTAATATCTGGTGTCAATGCTACTTGGGGGATGGTAGAAAGTTGGCATGCGCAACTGAATGGCGCCGTAGAGCTGTAAATGTGACGGGGTTGAGCTGTGATCATGTTTATATGTGGTGTGATACAGTCCATTTTAAGAGAATTATGAAAATTTACCGAACTGGTGAACGACAGGTTTGGTTTAAGTTCTTTGTGACAAGTGATATGGGGGAAAGTCATGAGTTGAACATCCAAACCAGAGAGTGCGGAGTCTACGTACTTCTTAAGTCAAAAGAAGAGTTGGAGTCACCACATTGTCAAACATCTCACCACACCCATGCCAATCATGAGCCAGACTTTAGTGATAACTGTTCCTGTAACTGCTTATTCGAGAAGAACATATTGAAGCCACTATTGATGGATTAG 3468 0.395 MGTKKLSSPFTVEIGTQEMAFSVKKYDVFISFRGEDTRSNFVSHLRNALDRDRIKTYTDEDKLGKGDQVWASLSQAIQDSHVAIVIFSQNYAFSKWCLKELVKILECRKSEGLIVIPVFYEVDPSHIRKFTGIFKEAMAKHEKFFGDRDNESIKEWKDALIEASNICGWDSRTRLYKNEAQIIDKIVEDVLEKLNQRSPIELKVEGLVGIDKICEEVKLLLSRNQKNRLLQNVKVIRIWGMGGIGKTTIAKALFCQLFPQYDSVCFLANVREESKRLGLMSLRGKLLSKLLKKEYEGSDVAESTFYTRRLNDKKVLIVLDDVNSLDQLDVLYRECNYVGPNSKIIITTRDRHLLISASVDEIYDVKMLNLAKSLELFSLHAFKERHPQKGYEDLSRRAVAYAGGVPLALKILGSNLYSRSTQFWDSELSKLMNCTNDRIQSVLQVSYDGLDSLEKKIFLDIAFFFKGENKGDIIRILDACGFGATSGVNVLEDKALITISLSGTIQMHDLIQEMGLNIVREGIENPRKRSRLKDIEEVPDVLGNNKGSNAVEGITLDLSEIEDLQVNADALSMMTNLRILKLYVPFGNRSGKVHWSGVLSKLSDKLRYLEWHGYPLKSLPASFSAKRLVEIHMRHSNLTELWEGVQDVVNLVRINLSKCKQLKNLPDLSKASKLERVDLYGCESLVAVHPSVLSLDKLKILVLDECKNLKSLKSGKHLRSLECICVDGCTSLREFSVSSDLIKWLDLCNTGIETLDSSIERLRNLRTLDVHGLRCGYLPSELCFLKDLRELKICKCRIAIEKENLHVIFDGLAYLKVLHLKDCCNLYELPHNISTLTNLHELRLDGSSVKTLPESIKHLKNLETLSLENCRKLVSIPELPPSVTILEAQNCVSLVKIPTLETLTFEMKGRRKSICFQNCMGLDEPRLHCITEGAYIATYNAVFQSRPVNRSRKSWRRSISYLSENCFLSYCIPGRRVPEEFTYRTTRSSFSINLPSSISDFAGLIFGAVLSPSQLQGTKTRINIWCQCYLGDGRKLACATEWRRRAVNVTGLSCDHVYMWCDTVHFKRIMKIYRTGERQVWFKFFVTSDMGESHELNIQTRECGVYVLLKSKEELESPHCQTSHHTHANHEPDFSDNCSCNCLFEKNILKPLLMD* 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0938 1155 PANTHER NB-ARC DOMAIN PROTEIN 24 980 - -
Apr6g0938 1155 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 980 IPR044974 GO:0006952
Apr6g0938 1155 PRINTS Disease resistance protein signature 235 250 - -
Apr6g0938 1155 PRINTS Disease resistance protein signature 309 323 - -
Apr6g0938 1155 PRINTS Disease resistance protein signature 402 416 - -
Apr6g0938 1155 PRINTS Disease resistance protein signature 857 873 - -
Apr6g0938 1155 Gene3D - 21 195 IPR035897 -
Apr6g0938 1155 Pfam NB-ARC domain 227 448 IPR002182 GO:0043531
Apr6g0938 1155 Gene3D Ribonuclease Inhibitor 529 740 IPR032675 -
Apr6g0938 1155 Gene3D Ribonuclease Inhibitor 741 922 IPR032675 -
Apr6g0938 1155 Pfam Leucine Rich Repeat 628 646 IPR011713 -
Apr6g0938 1155 Gene3D - 368 451 IPR042197 -
Apr6g0938 1155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 461 IPR027417 -
Apr6g0938 1155 SUPERFAMILY L domain-like 506 898 - -
Apr6g0938 1155 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 169 IPR035897 -
Apr6g0938 1155 SMART till_3 25 166 IPR000157 GO:0007165
Apr6g0938 1155 Pfam TIR domain 25 210 IPR000157 GO:0007165
Apr6g0938 1155 Gene3D - 196 362 IPR027417 -
Apr6g0938 1155 ProSiteProfiles TIR domain profile. 24 194 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0938 Apr-Chr6 13971353 13976574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0938 803 898 WRKY Transcription Factor Family AT4G12020 38.384 2.77e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0938 - - ccaj:109795381 1323.92