Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0934 ATGGCTCATTTTGAAAAAGATGAGGTGCCAATGCTGTCAGAGTCACGAGTCCAACTATCCGATGAAGCTGAGGATTCTAAATTCCGACAGCTTGTATCTAGGACACGAAGTGCATCAATTTCTATTCCTATGGCCTCATTGGAATCATATGAGAAAGAAACTAGTCTTGTGGGACATACTGGTCCACTACGCAGTGTGAGAAAAAACTCCTTTATACAGATGAGTGGTCCACTATTTGCTAGCCATGGAACTGCAAATCTTTCACGGCAGAGTATAGGTGTGACAGGAAACAAAGTAGTGGAGAGCAAGACAGAGAAGTTTTCTACTTTTGATGTCTCAGATGAAAATCATTGGGATAACAACTATGATAGAAAAAATGAACACTTAATGAGGTCTGGACAACTGGGAATGTGTAATGATCCATATTGTACTACATGCCCTACTTATGTCAAGGCTTCTCAGTCAAGAAATCAAAAAGCTTCAACTATATTTGATCCCAAGTTCCACAATTCTCTTTATGGGGAGGCCAAGGGTTTTGGGAGAAAATTTTGTTCTTTCTGCTCTTCATATGTTCCTGGAGTTATGAACCCTCACACTAACATTGTACAACAATGGAACAAGATTTTGGCCATTTTTTGCATGGTGGCAATTTTTGCTGATCCATTGTTTTTCTTCTTAATCTATGTGAAGAAGGATGATAAATGTATTGCTATCAACTGGACAATGACAACAGCACTTGTTTTACTTAGAAGTCTCAATGATTTTGTATATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCACCTGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGAGGACCATCCCAAGAAAATTGCTCTTCATTATCTGAAGGGTTATTTTCTTATCGACCTATTTGTTGTAGTTCCTCTTCCTCAGATAATGATATTGTTTGTCCTACCAAATTACCTGGGTGCATCAGGAGCAAACTATGCCAAGAATCTTCTACGTGCTGGAATCCTTGTGCAGTATTTTCCCAGATTATTAAGGTTTCTACCTCTGCTAATTGGCCAGTCTCCAACTGGATTCATATTTGAGTCAGCTTGGGCAAATTGCATTATAAATCTTCTCATTATTATGCTAGCTAGCCATGTCATTGGCTCTTTCTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGTTTACGAAATGCCTGCCATGGTTCTAATATTACTGGATGCACAACATTCATTGACTGTGGCCGAGGCAGTTCATTGCTTCGAAAATCAGATCTATGGAACAGCAATAAAGATGCAATAGCTTGTTTGAATTCTAGTTCTGGTGCGTTTTCTTATGGGATCTATGCCAATGCTGTATCACTTACTGTGGAAACTAAGGTGATCAACAAATATGTGTTTTCCCTGTTTTGGGGCTTCCAGCAAATTAGTACTCTGGCTGGAAATCAAACCCCGAGTAATTTTGTGTGGGAAGTCCTTTTTACAATGACCATCATAGGATTGGGACTCGTGCTTTTTGCACTTCTTGTTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGCTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAGTGGATGAGTCATCGTCGCTTGCCTGAAGAGCTACGAAGGAGAGTACGACAAGCTGAACGGTATAATTGGGCTGCAACAAGGGGGGTGAATGAAGAAAGGCTTCTGGAGAATTTGCCAGAAGATCTCCAAACGGACATAAGACGTCATCTATTCAAATTTGTTAAGAAATTTCGAATCTTTGCTCTGATGGATGAGCCTATCTTAGATGCCATTTGTGAGAGACTTAAACAAAAGACATACATCAAAGGAAGTAGAATTTTGACTCGGGGTGGTCTTGTGGAGAAGATGGTCTTTATTGTGCGTGGGAAATTGGAGAGCATTGAAGAAGATGGAAATGGAGTTCCCTTGTCTGAAGGGGATGCTTGTGGCGAAGAACTTTTGACATGGTATCTTGAACATTCTTCTGTCAGCACAGATGGTAAAAAAGTAAGGCTTCCAGGACAGAGGATACTGAGCAATAGGACAGTAAGATGCTTAACAAATGTGGAGGCCTTTTCACTTCGTGCGGCAGACCTTGAAGAACTCACAATTCTTTTCACAAGACTCTTGCGGAACCCTCATGTTCAAGGAGCCCTAAGGTATGAATCACCATATTGGAGATCCCTTGCAGCAAACCGAATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTTAGCCGTGCTAATACCACACAATCAGATCAAAAGTTAGTGTCCTAG 2316 0.4089 MAHFEKDEVPMLSESRVQLSDEAEDSKFRQLVSRTRSASISIPMASLESYEKETSLVGHTGPLRSVRKNSFIQMSGPLFASHGTANLSRQSIGVTGNKVVESKTEKFSTFDVSDENHWDNNYDRKNEHLMRSGQLGMCNDPYCTTCPTYVKASQSRNQKASTIFDPKFHNSLYGEAKGFGRKFCSFCSSYVPGVMNPHTNIVQQWNKILAIFCMVAIFADPLFFFLIYVKKDDKCIAINWTMTTALVLLRSLNDFVYFLNILLQFRLAYVSPESRVVGAGDLEDHPKKIALHYLKGYFLIDLFVVVPLPQIMILFVLPNYLGASGANYAKNLLRAGILVQYFPRLLRFLPLLIGQSPTGFIFESAWANCIINLLIIMLASHVIGSFWYLFGLQRVNQCLRNACHGSNITGCTTFIDCGRGSSLLRKSDLWNSNKDAIACLNSSSGAFSYGIYANAVSLTVETKVINKYVFSLFWGFQQISTLAGNQTPSNFVWEVLFTMTIIGLGLVLFALLVGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEELRRRVRQAERYNWAATRGVNEERLLENLPEDLQTDIRRHLFKFVKKFRIFALMDEPILDAICERLKQKTYIKGSRILTRGGLVEKMVFIVRGKLESIEEDGNGVPLSEGDACGEELLTWYLEHSSVSTDGKKVRLPGQRILSNRTVRCLTNVEAFSLRAADLEELTILFTRLLRNPHVQGALRYESPYWRSLAANRIQVAWRYRKKRLSRANTTQSDQKLVS* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0934 771 Pfam Ion transport protein 207 526 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr6g0934 771 CDD CAP_ED 598 714 IPR000595 -
Apr6g0934 771 Gene3D - 205 523 - -
Apr6g0934 771 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 763 - -
Apr6g0934 771 MobiDBLite consensus disorder prediction 1 20 - -
Apr6g0934 771 Gene3D Jelly Rolls 597 720 IPR014710 -
Apr6g0934 771 Gene3D Helix hairpin bin 525 590 - -
Apr6g0934 771 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 763 - -
Apr6g0934 771 SUPERFAMILY Voltage-gated potassium channels 197 526 - -
Apr6g0934 771 ProSiteProfiles cAMP/cGMP binding motif profile. 598 666 IPR000595 -
Apr6g0934 771 SUPERFAMILY cAMP-binding domain-like 526 716 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0934 Apr-Chr6 13865139 13893345 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0934 2 676 Ion Channels AT3G17700 60.029 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0934 K05391 - gsj:114390051 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0934 6 13865139 13893345 Apr6g0934 6 13865139 13893345 ECH