Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0933 ATGAATAATTTTGAAAGAGACGGGAAAGAAACACATGCACAACCTGATGAACTCGTCGATTCTAGATTTCGAAAGGTTGTATCAAGGACAAAAAGTGCATCAATTTCTATTCCTATGGTCTCGATGGAGCCATATGAGAGAGAAACTAGTCTAGTGGGACATACTGGTCCACTTTGTAGTGTGAGAAAATCACCCTTAATGCAGATGAGTGGTCCACTATATGCTACCAGTGGAACTGGAAACCTTTTGCATCGGAGTATAGTTGTGACAGAAAACAAAATAGTGGAGAGCAAGACAGAAACATTATCTCCTCTTGATGGAACAAATGAAAATCATTGGAATAACAACAATGATAGAAAAAATGAACACTTACTGAGGTCTGGGCTACTTGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACTTACTTCAAGGGCTCTCTGCAAAGACTTCCAAAATCTTCCACTATGTTTGATCCCAAGTTCCACTTCCAGAATGCTTTTTATGGGGATGCCAAGGGTTTTGGGAGAAAATTTATATCTTTCTGCTCTTCATTTGTTCCTGGAGTTATGAACCCTCACACAAAAGTTGTACAACAATGGAACAAGTTTTTGGCCATATTTAGCTTGGTGGCAATCTTTGTGGATCCATTATTTTTGTTCTTAATCTATGTGCAGAAGGATGATAAATGTATTGTTATCAACTGGAACATGACAAGAACACTAGTTCTATTAAGAAGTATAAATGATTTTGTATATTTCTTGAACATTCTTCTGCAGTTTAGGTTGGCCTATGTTTCTCCAGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCCAAGAAAATTGCTGTGCATTACCTGCAGGGTTACTTTCTTATCGATTTGTTTGTTGTATTTCCTCTTCCTCAGATAATGATATTGTTGGTCCTACCAAGACACTTGGGGTTATCAGGAGCAAACTATGCTAAGAATCTTCTGCGTGCAGCAATCCTTGTGCAGTATATTCCCAGATTATTCAGGTTTCTGCCTCTGCTAATTGGACAGTCTCCAACAGGATTTATATTTGAGTCAGCCTGGGCAAATTTCATCATAAATCTTCTCATTTTTATGCTTGCTAGCCATGTTGTTGGCTCTTGCTGGTACCTATTTGGTCTACAGAGGGTTAATCAATGTTTGAGAGATGCCTGCCGTAATTCTCCTATTGCTAGATGCATGACACTCATTGATTGTGGACATGGTCACACCGGAAACAATGAGTCTGACAAAGCATTAGCTCTGTGGAGCAAGAATGCTGATGCCATTGCTTGTTTGAATCCCTCCCCAGGTGGTTTTCATTATGGGATCTATGCCAATGCTGTACCACTTACTACAGAAACTAATGTGGTTAACAAATATGTTTATTCTCTATTTTGGGGGTTCCAGCAAATCAGTACTCTGGCTGGTAATCTAACCCCAAGCTATTTTGGGTGGGAAGTCCTTTTCACCATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAAGGTCTTGGACGGAGGAGGTTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATCTAAGGAAGAAAGTGAGACAGGCTGAACGTTATAATTGGGCTGCAACAAGGGGAGTGAATGAAGAAATGCTTCTTGAGAATTTGCCTGAAGATCTTCAGAGAGACATAAGACGTCATCTATTTAAATTTGTTGAGAAAGTCCGAATTTTCAACCTGATGGATGAGCCCATCTTAGATGCCATATGTGAGAGACTAAGACAAAAGACATACATCAAAGGAAGTATAATTTTGAGCCAGGGTGGTCTAGTAGAGAAGATGATCTTTATTGTGCGTGGAAAATTGGAGAGTATTGGAGAAGATGGAATTGGAGTACCCTTATCGGAAGGGGATGCTTGTGGTGAAGAACTTCTAACATGGTATCTTGAACATTCTTCTGTAAGCAAAGATGGTAAAAATGTAAGGTTACCGGGACACAGGTTACTTAGCAACAGGACAGTAAAGTGCTTAACAAATGTAGAGACTTTTTCACTCAAAGCTGCAGACCTTGAAGAAGTCACAACACTATTCATGAGATTCTTGCGGAATCTTCGAGTTCAAGGATCCCTAAGGTATGAATCACCTTACTGGAGATCCCTGGCCGCAACTCGAATTCAGGTTGCCTGGAGATACAACAAGAAACGTCAAAGTCGTGTGCTGATACATCACAGTCAGATGAAAAATTGA 2313 0.4034 MNNFERDGKETHAQPDELVDSRFRKVVSRTKSASISIPMVSMEPYERETSLVGHTGPLCSVRKSPLMQMSGPLYATSGTGNLLHRSIVVTENKIVESKTETLSPLDGTNENHWNNNNDRKNEHLLRSGLLGMCNDPYCTTCPTYFKGSLQRLPKSSTMFDPKFHFQNAFYGDAKGFGRKFISFCSSFVPGVMNPHTKVVQQWNKFLAIFSLVAIFVDPLFLFLIYVQKDDKCIVINWNMTRTLVLLRSINDFVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIAVHYLQGYFLIDLFVVFPLPQIMILLVLPRHLGLSGANYAKNLLRAAILVQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLASHVVGSCWYLFGLQRVNQCLRDACRNSPIARCMTLIDCGHGHTGNNESDKALALWSKNADAIACLNPSPGGFHYGIYANAVPLTTETNVVNKYVYSLFWGFQQISTLAGNLTPSYFGWEVLFTMAIIGLGLLLFALLIGNIQNFLQGLGRRRLEMQLRGRDVEQWMSHRRLPEDLRKKVRQAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFKFVEKVRIFNLMDEPILDAICERLRQKTYIKGSIILSQGGLVEKMIFIVRGKLESIGEDGIGVPLSEGDACGEELLTWYLEHSSVSKDGKNVRLPGHRLLSNRTVKCLTNVETFSLKAADLEEVTTLFMRFLRNLRVQGSLRYESPYWRSLAATRIQVAWRYNKKRQSRVLIHHSQMKN* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0933 770 Gene3D - 191 523 - -
Apr6g0933 770 Gene3D Jelly Rolls 597 721 IPR014710 -
Apr6g0933 770 Pfam Ion transport protein 204 526 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr6g0933 770 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 9 759 - -
Apr6g0933 770 CDD CAP_ED 599 715 IPR000595 -
Apr6g0933 770 ProSiteProfiles cAMP/cGMP binding motif profile. 599 667 IPR000595 -
Apr6g0933 770 Gene3D Helix hairpin bin 526 591 - -
Apr6g0933 770 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 759 - -
Apr6g0933 770 SUPERFAMILY Voltage-gated potassium channels 194 527 - -
Apr6g0933 770 SUPERFAMILY cAMP-binding domain-like 527 725 IPR018490 -
Apr6g0933 770 SMART cnmp_10 599 731 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0933 Apr-Chr6 13851611 13864398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0933 16 677 Ion Channels AT3G17700 61.883 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0933 K05391 - ccaj:109789004 1307.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0933 6 13851611 13864398 Apr6g0933 6 13851611 13864398 ECH