Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0927 ATGTCACCGGTTGGATTACCACCTGGTTTTAGGTTCCATCCAACAGATGAAGAGCTCGTCAACTATTATCTTAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAGCCATGGGAATTAGCAGAGAAATCATTTTTACCAAGTAGAGACCCAGAATGGTACTTTTTTGGACCCCGGGATAGGAAATACCCAAATGGGTTCAGAACAAATAGAGCAACTCGTGCAGGGTACTGGAAATCCACTGGAAAAGACAGAAGAGTTTCATGCCAAAGCAGACCTATTGGTATGAAGAAGACTTTGGTGTACTATAGAGGCAGAGCCCCTCAAGGGATCAGAACTGATTGGGTAATGCATGAGTATCGCCTTGATGACAAAGAGTGTGAGGACACAACTGGATTGCAGGATACTTATGCATTGTGCCGTGTGTTCAAGAAAAATGGAATCTGCTCTGATATTGAAGAGCAAGGGCAATGTAGTATGTCACTAATTGAGAGCTCCCATACCATAATTAATGAGTGTGAAACAATGTCTCCAGACATACCAGGGGCATCATCTTCGTGCTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATTACAGACGATGCATGGTATTCTTCTAATGCAGCTATTGGTGGTGGTGAAGAAGTCTCACATGTTACGTTTACAAACTAA 714 0.4216 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDTTGLQDTYALCRVFKKNGICSDIEEQGQCSMSLIESSHTIINECETMSPDIPGASSSCLEEEDKDDSWMQFITDDAWYSSNAAIGGGEEVSHVTFTN* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0927 237 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Apr6g0927 237 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Apr6g0927 237 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Apr6g0927 237 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Apr6g0927 237 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 237 - -
Apr6g0927 237 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0927 Apr-Chr6 13774194 13777482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0927 1 230 NAC Transcription Factor Family AT3G17730 75.610 1.22e-133 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr6g0927 NAM 9.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0927 - - gmx:100784495 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0927 6 13774194 13777482 Apr6g0927 6 13774194 13777482 ECH