Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0915 ATGGATCTGCCTTCACCCTCCTCTTCCTTCGGCTATGCATTCACCTATGATGTGTTTCTCAGCTTCAGAGGTTCTGATACTCGTCATGGTTTTACCGGTAATCTCTACAAAGCTCTCTGTGACAAAGGAATTCATACATTCATTGATGATGAAGAGCTACGCGGAGGGGATGAAATCACGCCATCACTTGTCAACGCCATTCAAGAGTCCACGATTGCCATACCTGTCTTCTCTGCCAACTATGCTTCTTCTTCTTTTTGCTTAGACGAACTTGTCACCATCACTGATTGCATTAAGGCAAAGGGTCGACTGGTTTTGCCAGTTTTCTATAACGTTGACCCTTCTCACGTGCGACATCAGACTGGGACTTATGCTAAAGCATTGGCTAAGCATGAAGCAAGGTTCAAGAAAAACAAGGAAAAGTTGAAGGGTAACATGGAGAGGTTGAAGAAATGGAAGATGGCTCTTAATCAAACAGCTAACTTGTCCGGACGTCATTACAAACACGGGCATGAATATGAACACGAGTTCATTGGGAAGATCGTCGAAGAGGTATCTAGAGCGATTAATCGTGCTCCTTTACCTATTGCTAATTACCCAGTGGGGCTGCAGGCTCCTATGGAAAAAGTGAATTCACTGCTTGTTGTGGGATCTGATGATGGAGTCCACATTGTAGGCATCCATGGAATTGGAGGAGTTGGTAAAACGACACTTGCTCTAGCTGTTTATAATTCAATTGCCGACAGTTTTGATGGTTCATGTTTTCTTGAAAACGTGAGAGAAACTTCAAAGAAACATGGGTTACAGCATCTCCAAAGCATCCTTCTTAACAGAACAGTTGGAGGGGAGAAGAAAATTGTGTTAACAAGTGTCCAAGAAGGAAAGTCAATGATATCGCAAAGGCTAGGGCGAAAGAAGGTTCTGTTGATTTTGGATGATGTTGACGAGCAAGATCAATTACAAGCAATCGTGGGAAGACCTGAATGGTTTGGTCCTGGTAGCAGAGTTATCATCACAACTCGGGATCAACAGTTGTTAGCAAGTCATGATGTTAATACAACATATGAGTTGAATCCGTTGAGTGAGGAAGATGCTCTTCGATTGCTTAGTTATAAAGCTTTTAAATCGGAAAATGTTGATACAAGTTATGCTGATGTCTTGAATCGGGTAGTAAATTATGCTTCGGGTCTTCCATTGGCTTTGGAAGTAATAGGTTCTAATTTGTGTGGAAAAAGTATAGAAGCATGGGATTCTGCTATAAATCAATATGAAAGAATTCCTAGTAATAAAATCCTAGAGACACTCAAAATAAGTTTTGATGCGTTGGAGGAAGAAGAAAAGAATGTTTTTCTCGACATTGCTTGTTGCTTCAAAGGATATGACTTGGTAGAGGTCAAAGATATACTCCATGCTCATCATGGTTACTGTGTGGAACATCATATTCAAGTTTTGAATGACAGATCTCTCATAAAAGTGAGTGAATATTACAGTGACAAAGTGACATTGCATGACTTGATAGAGGACATGGGTAAGGAAATTGTTCGACGTGAATCGTCAAAAGAGCCTGGAAAACGTAGTAGACTATGGTTCCATAAAGATGTGGTTCAAGTTTTTGAGCAAGATGAGGGATCCAATAAAATTGAAATCATATTTCTAGAATTTCAATTTTCTGAAGAAGAAGAAGTAAAATGGGATGGAGATGGGTTGAAGAAGATGAAAAGTCTGAAAACTCTTATTATAAAAAATGGTCGTTTTTCTCAAGGCCCCAGTCATCTTCCAAATAGTTTGAGAGTATTGGAATGGCGGAAATATCCTTTAGAGTATTTACCATCTCATTTTTGTCCCAACAAACTTGCTATATGCAAATTTGACAGGAGTTGCATTTCATCACTCGGGTTGAGTGGCTTATTATTAAAGAAGGTAGATCATCTATGTAACATCTTGCATTTTGATTTAAATAAAATAAGATTTATTAAATCCATCCCTAATGTATCTGGTCTCCAAATTTTAGAAAAGTTGTCGTTTCAACATTGTAGCAATTTATGTAGGATTCACGACTCCGTTGGGTTACTAAACAATCTTAAATTCTTGAATGCGTGGGGATGCAAGAGGCTTAGGTGTTTCCCCCCACTCAACTTAACCTCACTTGAAACTCTCGATCTTTCACATTGTCTTAGCCTTGAGAGCTTTCCCGAAATATCAGTAAAGATGGAAAATATGACAGAATTGCTCTTGCTTGAGTCTCCGATAAAAAGGTTCCCACGTTCATTTATAAATCTTACTGGGCTTCAAACTTTAATAGTGACTTCATGTTCGACCTCCGATGTTGTTGCTCCCCTTCTCCGTCGGGACATTGTCACAATGCCAAAACTGTCACTCATTTCAATTACGGGAATCGAAGGGTGCATAGTGCATAACAAAGAAGATGAGGGGGAAGAAAAAGTGAGCTCTTCAAACGTAGAGACAATTTGTATGCAAAGATGCAATCTAACAGATGATTTTTTTCTGTTAGTTAACGCGTGGTTTCCTAAACTTTATCTTCACAACTGCAAACATCTTCAAGAAATTGAAGGGATTCCACCGAACTTGAAAATATTCAATGCAATTGGATGCACATCCATGACTCCCTCGTGCAGAAGCAAGTTACTGAACCAGGAACTGTATGTGGCAAGAAAGACTATTTTTCCAGATGACTGTTACCCAAGCACTATAAATAATTTTAGTTTACCAGGATCAGAGATTCCAAACTGGTTTGAGCCCCAAAGCATGGGAACATCAATATCTTTCCGGTTTCGTAACAGGATCCCTCGATTAGTTTTCTGTCTTGTGGTACTTGGACCCGCAGTGAGAAATGAGAACCTTAAATTTGTCCAGATAATCAATGGCATCAGAGAACCTGTCTATATACCTGGAATTGATTATATTAAACAAGATCATATATATCTCCTTCATTTCGGGAAGATGACTTATGAACATGAACTTCTAAACCAATGGAACCATGCAGAGATAAGTGTTGTTGATGATAGTGGAATGTCACGTAAGATACTAGGCGGAATGCATGTATGCAAAGAGGAATATGATATGGAGGATATTCAATTCATTGATCCTCGTGGAAAGAGAAAATTAGATGATGATCTTGATACCTCAGAATCACAGCACCATCAGCTGCGGAAAAAGCATAGATTTGTGGACTCGCAAGTTTCTGAGACACAAATTGTGCAGCAGCAACAAGGAACAGGTTTTTTGTCACATGTGAAGAATTGGGCACGTAGTGTTTTCTCATTTCTTCCTACTCCAGCAATGCAATCATTGGATGATCATGTGAATGAAAATTCATGGTCTTTGGCATCAAATGCAGATAATGGACAGCACTAA 3375 0.3923 MDLPSPSSSFGYAFTYDVFLSFRGSDTRHGFTGNLYKALCDKGIHTFIDDEELRGGDEITPSLVNAIQESTIAIPVFSANYASSSFCLDELVTITDCIKAKGRLVLPVFYNVDPSHVRHQTGTYAKALAKHEARFKKNKEKLKGNMERLKKWKMALNQTANLSGRHYKHGHEYEHEFIGKIVEEVSRAINRAPLPIANYPVGLQAPMEKVNSLLVVGSDDGVHIVGIHGIGGVGKTTLALAVYNSIADSFDGSCFLENVRETSKKHGLQHLQSILLNRTVGGEKKIVLTSVQEGKSMISQRLGRKKVLLILDDVDEQDQLQAIVGRPEWFGPGSRVIITTRDQQLLASHDVNTTYELNPLSEEDALRLLSYKAFKSENVDTSYADVLNRVVNYASGLPLALEVIGSNLCGKSIEAWDSAINQYERIPSNKILETLKISFDALEEEEKNVFLDIACCFKGYDLVEVKDILHAHHGYCVEHHIQVLNDRSLIKVSEYYSDKVTLHDLIEDMGKEIVRRESSKEPGKRSRLWFHKDVVQVFEQDEGSNKIEIIFLEFQFSEEEEVKWDGDGLKKMKSLKTLIIKNGRFSQGPSHLPNSLRVLEWRKYPLEYLPSHFCPNKLAICKFDRSCISSLGLSGLLLKKVDHLCNILHFDLNKIRFIKSIPNVSGLQILEKLSFQHCSNLCRIHDSVGLLNNLKFLNAWGCKRLRCFPPLNLTSLETLDLSHCLSLESFPEISVKMENMTELLLLESPIKRFPRSFINLTGLQTLIVTSCSTSDVVAPLLRRDIVTMPKLSLISITGIEGCIVHNKEDEGEEKVSSSNVETICMQRCNLTDDFFLLVNAWFPKLYLHNCKHLQEIEGIPPNLKIFNAIGCTSMTPSCRSKLLNQELYVARKTIFPDDCYPSTINNFSLPGSEIPNWFEPQSMGTSISFRFRNRIPRLVFCLVVLGPAVRNENLKFVQIINGIREPVYIPGIDYIKQDHIYLLHFGKMTYEHELLNQWNHAEISVVDDSGMSRKILGGMHVCKEEYDMEDIQFIDPRGKRKLDDDLDTSESQHHQLRKKHRFVDSQVSETQIVQQQQGTGFLSHVKNWARSVFSFLPTPAMQSLDDHVNENSWSLASNADNGQH* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0915 1124 Gene3D Ribonuclease Inhibitor 565 711 IPR032675 -
Apr6g0915 1124 Gene3D Ribonuclease Inhibitor 712 891 IPR032675 -
Apr6g0915 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 453 IPR027417 -
Apr6g0915 1124 SMART till_3 15 162 IPR000157 GO:0007165
Apr6g0915 1124 Pfam NB-ARC domain 205 426 IPR002182 GO:0043531
Apr6g0915 1124 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 1005 IPR044974 GO:0006952
Apr6g0915 1124 SUPERFAMILY "Winged helix" DNA-binding domain 429 538 IPR036390 -
Apr6g0915 1124 Coils Coil 1039 1059 - -
Apr6g0915 1124 Gene3D - 193 354 IPR027417 -
Apr6g0915 1124 SUPERFAMILY L domain-like 560 875 - -
Apr6g0915 1124 PANTHER ARCHAEAL ATPASE 26 1005 - -
Apr6g0915 1124 Gene3D - 359 443 IPR042197 -
Apr6g0915 1124 PRINTS Disease resistance protein signature 224 239 - -
Apr6g0915 1124 PRINTS Disease resistance protein signature 301 315 - -
Apr6g0915 1124 PRINTS Disease resistance protein signature 394 408 - -
Apr6g0915 1124 PRINTS Disease resistance protein signature 711 727 - -
Apr6g0915 1124 ProSiteProfiles TIR domain profile. 14 189 IPR000157 GO:0007165
Apr6g0915 1124 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 164 IPR035897 -
Apr6g0915 1124 Gene3D - 12 192 IPR035897 -
Apr6g0915 1124 Pfam TIR domain 16 190 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0915 Apr-Chr6 13611660 13622138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0915 5 766 WRKY Transcription Factor Family AT4G12020 28.093 2.35e-68 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0915 - - aprc:113866727 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0915 6 13611660 13622138 Apr2g1621 2 21931190 21936729 PCT