Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0914 ATGGCTGTGTCACCATCCCATTACTCACCCTCCTCTTCCTTCAGCTGTGCATATACCTACGATGTTTTTCTCAGCTTCAGAGGGGAAGATACTCGCTACGGTTTTACTGGTAATCTTTACAAAGCTCTCCGTGACAAAGGCATTCATACCTTCATTGATGATGAGAAGCTTCGAGGAGGGGACGAAATAACACCGTCACTTGTGAAGGCCATTGAAGGGTCTCGGATTGCAATCCCCATTTTCTCTATTGGCTATGCTGCTTCTTCTTTTTGCTTAGATGAACTTGCCACCATCATGAATAGGAAAGATATGTTGGTTTTGCCAGTTTTTTATAACGTTGACCCTTGTGATGTGAGACATCAAAGAGGCAATTATGGAAAAGCATTGGCAAATCATGGAAAGAAGTTGAAGGCTAACAACGAGAAGTTGGAGAAATGGAAGATGGCTCTTCATCAAGTAGCTAACTTGTCTGGTTACCACTTCAAACACGGGGATGGATATGAGTATGAGTTTATTGGGAGGATTGTTGAATTGGTCTCTAGCAAGATTAATCGTACTCTCTTACATGTTGCAAATTACCCAGTTGGACTAGAGTCACGAATACTAGAAGTAAAGAACCTTTTGGATGTTCAATCTGATGAAGGTGCCGACATGGTAGGGATACATGGACCTGGTGGAATGGGTAAAACAACACTTGCTTTAGCAGTTTATAACTTGATTGCTCACCAGTTTGACAGTTCATGTTTTCTTCAAGATGCTAGAGAAAATTCAAAAACCTATGGGTTACAATATCTCCAAAATATGGTTCTTTTGAAAACACTTGGAGAAAAGGATATTAAGTTAGCAAGTGTTAATGAAGGAATTTCAATAATAAAGAACAGGCTCAAGCAAAAGAAGGTTCTCTTGATTCTAGACGACGTTTGCAATCAGGAGCAGTTGCAGGCAATTGCTGGAGCACCAAATTGGTTTGGTCTGGGCAGTAGAGTCATCATCACAACTCGAGACCAACAATTGCTAGCACATCACAATGTTAAAAGAACATATGAGGTGAGCGAGTTGAATAGAAAAGATGCCCTTCAATTGCTCAGTTGGAATGCTTTTAAATCAGAAAAAAATGATCCAAGTTATGTCAATGTCTTGGATCGTTTAATAACTTATGCTTCGGGGCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTGTATGGAAAAAACATAGAAGCATGGGAATCAGCTATAAATCAATATGAAAGGATTCCTAACAAAAAAATCCTAGGTATACTTAAAGTAAGCTTTGATGCCTTGGAGGAAGAAGAAAAGTGTGTTTTTCTTGATATTGCTTGTTGCTTCAAAGGATATGACTTGGCAGAAGTCGAAGATATACTTCATGCTCATTATGGTGACAACATGAAACATCATATTCAAGTTTTGATTGACAAATCTCTCATAAAAATTAAAGGATTTTGCTATAAAACAGTTACACTACATGGCTTGATACGGGAGATGGGTAAGGAAATTGTTCGACAAGAATCACCAAAAGAGCCTGGAAAACGTAGTAGATTGTGGTTCCATGAAGATGTAGTTCAAGTTTTAGAGCAAAACGAGGGATCCAATCAAATTGAAATCATAATTCTACAATTTCCCTTTTCTGGAAAAAGAGAAGATGAAGAAGTAAAATGGGATGGAGATGCATTCAAGAAGATGAAAAGTCTCAAAACTCTTATTATAAAAAATGGTTGTTTTTCCAAAGGCCCCAATCATCTTCCAAATAATTTAAGAGTATTGGAATGGAATAAATATCCTTCAGAAGATTTTCCTTCTAATTTTTGTCCAAAGAAACTTGCTATATGCAACTTACCTAGCAGTCGCATTTCGTCATGTTTCTTATTGAGAAAGGAGTTCACAACTTTGACAAGTTTAAATTTTGATTGGTGTCAATATTTAAAAGAGATACCTAATGTTTCTAGTCTCCAAAATTTAGAAAATTTGTCATTTGCTTGGTGTAAGAATTTATGTAAGATTCACGATTCCATTGGGTCACTGAATAATCTAAAATTCTTGAGTTCTAATGGATGCTACAACCTTAAGAGTTTCCCTCCAATCATGTTAACCTCACTTGAATCGCTCAGTCTTTCAAATTGTGCTAGTCTTGAGAGTTTTCCAGAAGTATTAGGAGAGATGGGAAATTTGACAGAATTGGTGTTGATTGATTCTAAAATAAAAAAACTCCCACCTTCATTTCAAAATCTTACTGGGCTTGCAAGATTAAGAATGGGGTGTTCAGATATTTACAGGACCTGGGATGGAACTTTCATGCTCAATTGGAACAACGTCACGATGCCAGGACTGACTGAGATTTCAATTGAAGGAATGGAAGTGGAAGTATTTCGTAAAGAGAATGAGGGAGAAGAAAAAGCAAGCTCTTCAAACATGCAAAGTATTCATCTCCAAAGATGCAAACTAACAGATGAATTTTTTCTAGTAGTTCCCAGGTGGCTTGCTAATGTGAAGGAATTAGTCCTAAAGCAAAATGATTTCATAATCATTCCAGAGAGTATCAAAGAATGTCACTTTTTAAAAAAAATTGACTTGAGCTATTGCAAGCGTCTTCAAGAAATCAAAGGGATTCCACCAAACCTGGAATGTTTCAATGCAACAAGATGCACATCCATGACACCCTCATGCAGAAGCATGTTACTGAACCAGGAACTACATGAGGCCAGAAACACTGATTTTTGTTTGCCAGCAACAGAGATTCCAGAATGGTTTGAGCGTCAAAGCATGGGAACATCAATATATTTCTGGTTTCGTAAAAAGGTTCCTGAATTAGTTCTATGTCTTGCTGTCATGTATCCCACATTAAAAGATGAGCCGTATCAATTCATCCTGATTATCAATGGTGCTCAAAAACATCTTAAAGGTTTTAATATAAAAACAAAACATACATATCTTTTTCATGTGAAAGAGGAGACACTTGGATTTCTTAATCAAGCACTTTTAGAAAACAAATGGAACTATGCAGAGGTTAGATGTGTTTTGGGGCATTTTAAAGACCAAATCCCTGTCCATATACTAGGTGGAATTCATTTACTGAAACAGGAATGTAGCATGGAGGATATTCAGTTCAGCAATTCCTGTATAAAGAGAAAGTTAGATGATGATCTTGATACCTCAGAATCACAGCACCATCAGCTGCGGAAAAAGCATAGATTTGTGGACTCGCAAGTTTCTGATACACAAATTGTGCAGCAGCAACAAGGAACAGGTTTTTTGTCACATGTGAAGAATTGGGCACGTAGTGTTTCCTCATTTCTTCCTACTCCAGAAATGCAATCATTGGATGATCATGTGAATGAAAATTCATGGTCTTTGCCATCAAATGCAGATGATGGGCAGCACTAA 3402 0.3733 MAVSPSHYSPSSSFSCAYTYDVFLSFRGEDTRYGFTGNLYKALRDKGIHTFIDDEKLRGGDEITPSLVKAIEGSRIAIPIFSIGYAASSFCLDELATIMNRKDMLVLPVFYNVDPCDVRHQRGNYGKALANHGKKLKANNEKLEKWKMALHQVANLSGYHFKHGDGYEYEFIGRIVELVSSKINRTLLHVANYPVGLESRILEVKNLLDVQSDEGADMVGIHGPGGMGKTTLALAVYNLIAHQFDSSCFLQDARENSKTYGLQYLQNMVLLKTLGEKDIKLASVNEGISIIKNRLKQKKVLLILDDVCNQEQLQAIAGAPNWFGLGSRVIITTRDQQLLAHHNVKRTYEVSELNRKDALQLLSWNAFKSEKNDPSYVNVLDRLITYASGLPLALEVIGSNLYGKNIEAWESAINQYERIPNKKILGILKVSFDALEEEEKCVFLDIACCFKGYDLAEVEDILHAHYGDNMKHHIQVLIDKSLIKIKGFCYKTVTLHGLIREMGKEIVRQESPKEPGKRSRLWFHEDVVQVLEQNEGSNQIEIIILQFPFSGKREDEEVKWDGDAFKKMKSLKTLIIKNGCFSKGPNHLPNNLRVLEWNKYPSEDFPSNFCPKKLAICNLPSSRISSCFLLRKEFTTLTSLNFDWCQYLKEIPNVSSLQNLENLSFAWCKNLCKIHDSIGSLNNLKFLSSNGCYNLKSFPPIMLTSLESLSLSNCASLESFPEVLGEMGNLTELVLIDSKIKKLPPSFQNLTGLARLRMGCSDIYRTWDGTFMLNWNNVTMPGLTEISIEGMEVEVFRKENEGEEKASSSNMQSIHLQRCKLTDEFFLVVPRWLANVKELVLKQNDFIIIPESIKECHFLKKIDLSYCKRLQEIKGIPPNLECFNATRCTSMTPSCRSMLLNQELHEARNTDFCLPATEIPEWFERQSMGTSIYFWFRKKVPELVLCLAVMYPTLKDEPYQFILIINGAQKHLKGFNIKTKHTYLFHVKEETLGFLNQALLENKWNYAEVRCVLGHFKDQIPVHILGGIHLLKQECSMEDIQFSNSCIKRKLDDDLDTSESQHHQLRKKHRFVDSQVSDTQIVQQQQGTGFLSHVKNWARSVSSFLPTPEMQSLDDHVNENSWSLPSNADDGQH* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0914 1133 ProSiteProfiles TIR domain profile. 18 183 IPR000157 GO:0007165
Apr6g0914 1133 Gene3D - 183 348 IPR027417 -
Apr6g0914 1133 Gene3D - 19 182 IPR035897 -
Apr6g0914 1133 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 159 IPR035897 -
Apr6g0914 1133 CDD AAA 195 335 - -
Apr6g0914 1133 Pfam NB-ARC domain 201 418 IPR002182 GO:0043531
Apr6g0914 1133 Gene3D Ribonuclease Inhibitor 559 724 IPR032675 -
Apr6g0914 1133 Gene3D Ribonuclease Inhibitor 725 906 IPR032675 -
Apr6g0914 1133 PANTHER ARCHAEAL ATPASE 30 1011 - -
Apr6g0914 1133 PRINTS Disease resistance protein signature 218 233 - -
Apr6g0914 1133 PRINTS Disease resistance protein signature 294 308 - -
Apr6g0914 1133 PRINTS Disease resistance protein signature 387 401 - -
Apr6g0914 1133 PRINTS Disease resistance protein signature 701 717 - -
Apr6g0914 1133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 1011 IPR044974 GO:0006952
Apr6g0914 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 446 IPR027417 -
Apr6g0914 1133 MobiDBLite consensus disorder prediction 1110 1133 - -
Apr6g0914 1133 Gene3D - 352 436 IPR042197 -
Apr6g0914 1133 SUPERFAMILY L domain-like 511 895 - -
Apr6g0914 1133 SMART till_3 19 156 IPR000157 GO:0007165
Apr6g0914 1133 Pfam TIR domain 20 184 IPR000157 GO:0007165
Apr6g0914 1133 Coils Coil 1048 1068 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0914 Apr-Chr6 13606054 13610493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0914 9 758 WRKY Transcription Factor Family AT4G12020 28.278 9.56e-69 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0914 - - aprc:113866727 2268.81