Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0912 ATGGCTGTTAGATCATGTTCTTCTTCCTTCACCTATGCATTCACCTATGATGTTTTCCTTAGCTTTAGAGGCTCAGATACACGTCATGGTTTTGTTGGCAATCTATTTAAAGCTCTTCAAGACAAGGGAATTCACACCTTCATTGATGATGAGGGGCTTCAAAGAGGAGAGGAAATAACACCAGCACTTGTTAAGGCAATTGAAGAGTCAAGAATTGCCATCACTGTGCTCTCTAATAACTATGCATATTCTTCATTTTGCTTAGATGAACTTGCCCACATCCTTGAGTGTGTTAAGAGAAAAGGTACATTTGTTTTGCCCGTTTTTTATGACGTTGATCCTTCTCATGTGAGACACCAAAGAGGTAGTTATGGACAAGCATTGGCAAGTCATGAAGAAAGGTTCAAACATAACATGGAGAAATTGCAGAAATGGAAGATGGCTTTGCATCATGTAGCTAACTTCTCTGGCTACCATTTCAAACATGGAGATGGTTATGAATACGAGTTTGTTGGGCAGATTGTTGAGTTGGTTTCCAACAAGATTAATCGTGCTCCTTTACATGTTGCGGATTACCCTGTTGGACTAGAGTCACAGGTGCTAAAAGTAAGGAAGCTTTTGGATGTTGGATCTGATGATGGTGTTCTAATGATAGGGATTCATGGAATTGGTGGTATAGGAAAAACAACACTTGCTCTGGCAGTTTATAATTTGATTGCTGACCATTTTGATGGTTTGTGTTTTCTAGAAAATGTGAGAGAAAATTCAGACAAACATGGGTTACAGCATCTCCAAAGCATCCTACTTTCAGAAGTACTTGGAGAGAAGAAAATTAAGTTATCAAGTGTCAAACAAGGAATTTCAATACTACAACACAGGCTCCAGCGAAAGAAGGTTCTCTTGATTCTAGATGATGTCGACAAGCACGAGCAATTAAATGCCATTGTTGGAAAACCTGATTGGTTTGGTCCTGGCAGTAGAGTCATCATCACGACCCGGGACAAACAGCTACTAGCGTGTCATGAAGTTAAAGGTACACATGAGGTGAAGAAATTGAATAAGAACGATGCTCTTCAATTACTTAGTTGGAAAGCATTTAAATCTGAAAAAGTTGATCCAAGTTATGTGGATGTCTTGAATTGTGCAGTAGCTTATGCTTCTGGTCATCCGTTGGCTTTGGAAGTAATCGGTTCCAACCTGTTCGGTAAAAGTATAGAGCAATGGAAATCTGCTATCAATCAATATAAAAGAATTCCAAATTGTCAAATCCTAAAGATACTTAAAGTAAGCTTTGATGCTTTAGAGGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCCTGTTGCTTTAAAGGATATAACTTAGAAGAGGTTGAAGATATACTTCATGCTCATTACGGTGACTCCATGAAATATCATATTGGGTTGCTGGTTGAAAAATCTCTCATAAAGCTGACTTGGGCTGGTGGGGTGACATTGCATGACTTGATAGAGGACATGGGTAAAGAAATTGTCCGACAGAAATCACCGAAAGATCCTGGGAAGCGCAGTAGATTATGGTTACCGGAAGATATAATTCAAGTTTTGGAAGACAACTCGGGAACTAGTGAAATTGAAATCATATGTCTGGATTTCCCCTTATTTGACAAAGAGGAAATAGTAGAATGGAATCGAAAGGCCTTTAAGAAGATGAAAAATCTCAAAACGCTAATTATTAAAAATGGTCATTTTTCCAAAAGCCCCAAATATCTTCCAAATAGTTTAAGAGTACTGGAATGGTGGAGATATCCTTCACATGATTTACCCTCTGATTTTCATTCAAGGAAACTTGCCATATGCAAGTTACCCCAAAGTTGCTTTACATCACTTGAGTTGGCTGGCTTATTGAAGAAGTTTGTGAATATGAGAGTTTTGAATTTGGACAAGTGTAAGTATTTAATGCAAATACCCGATGTATCTGGTCTCCCAAATTTAGAAAAACTCTCATTTCAACATTGTCAGGATTTAACTACAATTCACAATTCAATTGGATTTCTAGAGAAACTTAAAATCTTGAGTGCTTTAGGTTGCACTAAGCTAAGGAGTTTTCCACCCATCAAGTTGACCTCTCTTGAACAACTCAATCTTTCTCGTTGTTATAGCCTTGAGAGTTTTCCAGAAATATTAGGAACAATGGAAAAAATAACAGAACTTCAATTGGAGTTCACACCTATAAAAGAATTGCCATTTTCATTTCAAAATCTTACTCGGCTTCGAGAATTACAACTGGCTGACTGTGGAATTGTTCAATTACCAAGTAGCATTGTCATGATGCCAGAATTAACTGAATTTATTGCGTGGAGATGGAAAGGGTGGCAATGGCTAAAACATGAAGAGGGTGAAGAAAAAGTGTGCTCAACAGCATCTTCAAAGGTAGAATGTCTTTGGGTCTCACAATGCAACCTCAATGATGAATTTTTTTCAACAGGTCTCACATGGTTTGCTCTTGTGAAAGATTTAGACCTATCGAAGAATAATCTCACAGTTCTTCCTGAATGCATCAAAGAATGTCGATTTTTAAGGAAGCTTAACGTGAATGATTGCAAGAACCTTCGCGAAATTAGAGGGATTCCACCAAACTTAAAACATTTCTTAGCAACTAACTGTAAATCCTTGACTTCCTCGAGTATAAGCATGCTACTGAATCAGGAACTGCATGAAGCTGGAAACACTCAATTTTATTTGCCAGGAGCTAGGATTCCAGTGTGGTTTGGTCACCATAGCAAGGGACCCTCAATTTCTTTCTGGTTTCATAATAAGTTCCCTGTAAAAGTTTTTTGTCTTGTTATTGGACCAATGGATAATGAGTCTGGCATGTTTAGACCTGTTGTTATCATAAATAACAGTAAACGTTTCCTTGATAGTGGCTATTTCATGATGGGAATGGATCACACATATCTTTTTGATCTGCAAAAGATAGAATTCAAAGATAGTCTATATGAAGTGCGTTTAGAAAATGAATGGAACCATGTGGAGGTCACATATGAGGGTTTGGAAGAGATCTCAAGCCTTAAAGAAATTGGAATCCATGTCTTCAAACAAGAAGGTAGCATAGAAGATATTCAATTCGCTGATCCTTATAGCAAGAGAAAATTGGATGATGCTCTCAACAGTTCAGAATCACAAACCTACCAGTTGCTAAAAAAGCATAGATTCGTGGACATGTAA 3204 0.377 MAVRSCSSSFTYAFTYDVFLSFRGSDTRHGFVGNLFKALQDKGIHTFIDDEGLQRGEEITPALVKAIEESRIAITVLSNNYAYSSFCLDELAHILECVKRKGTFVLPVFYDVDPSHVRHQRGSYGQALASHEERFKHNMEKLQKWKMALHHVANFSGYHFKHGDGYEYEFVGQIVELVSNKINRAPLHVADYPVGLESQVLKVRKLLDVGSDDGVLMIGIHGIGGIGKTTLALAVYNLIADHFDGLCFLENVRENSDKHGLQHLQSILLSEVLGEKKIKLSSVKQGISILQHRLQRKKVLLILDDVDKHEQLNAIVGKPDWFGPGSRVIITTRDKQLLACHEVKGTHEVKKLNKNDALQLLSWKAFKSEKVDPSYVDVLNCAVAYASGHPLALEVIGSNLFGKSIEQWKSAINQYKRIPNCQILKILKVSFDALEEEEKSVFLDIACCFKGYNLEEVEDILHAHYGDSMKYHIGLLVEKSLIKLTWAGGVTLHDLIEDMGKEIVRQKSPKDPGKRSRLWLPEDIIQVLEDNSGTSEIEIICLDFPLFDKEEIVEWNRKAFKKMKNLKTLIIKNGHFSKSPKYLPNSLRVLEWWRYPSHDLPSDFHSRKLAICKLPQSCFTSLELAGLLKKFVNMRVLNLDKCKYLMQIPDVSGLPNLEKLSFQHCQDLTTIHNSIGFLEKLKILSALGCTKLRSFPPIKLTSLEQLNLSRCYSLESFPEILGTMEKITELQLEFTPIKELPFSFQNLTRLRELQLADCGIVQLPSSIVMMPELTEFIAWRWKGWQWLKHEEGEEKVCSTASSKVECLWVSQCNLNDEFFSTGLTWFALVKDLDLSKNNLTVLPECIKECRFLRKLNVNDCKNLREIRGIPPNLKHFLATNCKSLTSSSISMLLNQELHEAGNTQFYLPGARIPVWFGHHSKGPSISFWFHNKFPVKVFCLVIGPMDNESGMFRPVVIINNSKRFLDSGYFMMGMDHTYLFDLQKIEFKDSLYEVRLENEWNHVEVTYEGLEEISSLKEIGIHVFKQEGSIEDIQFADPYSKRKLDDALNSSESQTYQLLKKHRFVDM* 1068
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0912 1067 PRINTS Disease resistance protein signature 217 232 - -
Apr6g0912 1067 PRINTS Disease resistance protein signature 293 307 - -
Apr6g0912 1067 PRINTS Disease resistance protein signature 386 400 - -
Apr6g0912 1067 PRINTS Disease resistance protein signature 698 714 - -
Apr6g0912 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 445 IPR027417 -
Apr6g0912 1067 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 914 IPR044974 GO:0006952
Apr6g0912 1067 SMART till_3 15 155 IPR000157 GO:0007165
Apr6g0912 1067 SUPERFAMILY L domain-like 548 902 - -
Apr6g0912 1067 Gene3D - 181 345 IPR027417 -
Apr6g0912 1067 Gene3D Ribonuclease Inhibitor 535 790 IPR032675 -
Apr6g0912 1067 Gene3D Ribonuclease Inhibitor 792 916 IPR032675 -
Apr6g0912 1067 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Apr6g0912 1067 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 18 914 - -
Apr6g0912 1067 Pfam NB-ARC domain 198 417 IPR002182 GO:0043531
Apr6g0912 1067 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Apr6g0912 1067 Gene3D - 351 435 IPR042197 -
Apr6g0912 1067 Pfam TIR domain 16 184 IPR000157 GO:0007165
Apr6g0912 1067 SUPERFAMILY "Winged helix" DNA-binding domain 422 529 IPR036390 -
Apr6g0912 1067 Gene3D - 15 180 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr6g0912 Apr-Chr6 13565631 13570039 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0912 10 773 WRKY Transcription Factor Family AT4G12020 31.156 8.67e-79 281
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0912 - - gmx:100780257 1699.1