Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0911 ATGGCTGTTAGATCATGTTCTTCTTCCTTCACCTATGCATTCACCTATGATGTTTTCCTTAGCTTTAGAGGCTCAGATACACGTCATGGTTTTGTTGGCAATCTATTTAAAGCTCTTCAAGACAAGGGAATTCACACCTTCATTGATGATGAGGGGCTTCAAAGAGGAGAGGAAATATCACCAGCACTTGTCAAGGCAATTGAAGAGTCAAGAATTGCCATCGCTGTGCTCTCTAATAATTATGCATATTCTTCATTTTGCTTAGATGAACTTGCCCACATCCTTGAGTGTGTTAAGAGAAAAGATACATTGGTTTTGCCCCTTTTTTATGATGTTGATCCCTCTCATGTGAGATACCAAAGAGGTAGTTATGGAGAAGCATTGGCAAGTCATGGAGAAAGGTTCAAGCATAACATGGAGAAGTTGCAGAAATGGAAGATGGCTTTGCATCATGTAGCTAACTTGTCTGGCTACCATTTCAAACACGGAGATGGTTATGAATACGAGTTTATTGGGAGGATTGTTGAGTTGGTTTCCAACAAGATTAATCGTGCTCCTTTACATGTTGCGGATTATCCTGTTGGACTAGAGTCACAAGTGCTGGAAGTAAGGAAACTTTTGGATGTTGGATCTGATGATGGTGTTCTAATGATAGGGATTCATGGAATTGGTGGGATAGGAAAAACAACACTTGCTCTGGCAGTTTACAATTTGATTGCTGACCATTTTGATGGTTTGTGTTTTCTAGAAAATGTGAGAGAAAATTCAGACAAACATGGGTTACAACATCTCCAAAGCATCCTACTTTCAGAAATACTTGGAGAGACGAAAATTAAGTTAGCGAGTGTCAAACAAGGAATTTCAATACTACAACACAGGCTCCAGCGACAGAAGGTTCTCTTGATTCTAGATGATGTCGACAAGCACGAGCAATTAAATGCCATTGTTGGAAAACCTGATTGGTTTGGTCCTGGCAGTAGAGTCATCATCACGACCCGGGACAAACATCTACTAGCATGTCATGAAGTTAAAAGTACACATGAGGTGAAGAAATTGAATAAGAACGATGCTCTTCAATTACTTAGTTGGAAAGCATTTAAATCAGAAAAAGTTGATCCAAGTTATGTGGATGTCATGAATTGTGCAGTAGCTTATGCTTCTGGTCATCCATTGGCTTTGGAAGTAATCGGTTCCAACTTGTTTGGTAAAAGTATAGAACAATGGAAATCTGCTATCAATCAATATAAAAGAATTCCAAATTGTCATATCCTAAAGATACTTAAAGTAAGCTTTGATGCTTTAGAGGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCCTGTTGCTTTAAAGGATATAACTTAGAAGAAGTTGAAGATATACTTCATGCTCATTATGGTGACTCCATGAAATATCATATTGGGTTGCTGGTTGAAAAATCTCTCATAAAGCTTACTTGGGCTGGTGGGGTGACATTGCATGACTTGATAGAGGACATGGGTAAAGAGATTGTCCGACAGAAATCACCGAAAGATCCTGGGAAGCGCAGTAGATTATGGTTACCGGAAGATATAATTCATGTTTTCGAACACGACTCGGGAACTGGTGAAATTGAAATCATACGTCTGGCTTCCTCCTTACTTGACAAAGAAGAAATAATTAAATGGAATAGAAAGGCCTTCAAGAAGATGAAAAACCTCAAAACACTTATAATTAAAAATGGTCATTTTTCCAAAGGTCCCAAACATCTTCCGAATAGTTTAAGAGTACTGGAATGGGCGAAATATCCTTCACAAGGGTTTCCAGCTAATTTTTGTTCAAAGAAACTGAGCATATGCAAGTTACCTAAAAGTTGTTTCTCACTAGAGTTGGCTGACTTATCAGAGTTCATGAACATGAGTGTTTTGAATTTTGACGAGTGTGAAGGTTTAACACAAATACCAGATGTATCGGGGCTCCAAAATTTAGAAAAATTTTCATTCAAAAATTGTGAGAATTTAATTACAATTCATGATTCCATTGGATTCCTACATAAGCTTAAATTCTTGAATGCTATAGGTTGCAGAAAGCTCAGGAGTTTTCCACCCCTCAAACTGACCTCTCTTGAGAAACTTGAACTTTCATATTGTTCCAATCTTGAGTGTTTTCCAGAAATATTAGGGAAAATGGAAAATATAACAGAACTTGTGTTGGAGGCCTCTGCCATAAAAGAATTGCCATTTTCATTTCAAAATCTCACTGGGCTTCAAATATTACAGTTGCGTCTAGGAGGAATGATTAGGTTACCTAGCAGCATTGTCATGATGCCAAAATTGACTGAGATTATTGCTTGGGATTGGAAAGGGTTGCTATGGCCAAGACAGGTTGAGGGTGAAGAAAAAGTAAGCTCAATGGTGTCTTCAAATGTAGATTGTCTTTGTCTCTCAGGCTGCAACCTGTCTGATCAATTTTTACCAGTAGCTCTCTCATGGTTTGTTAATGTAAAAGATTTAGACCTATCAAGGAACAAGTTCACAGTTCTTCCTGAATGCATCAGTGAATGCCATTTTTTATGGAAGCTTATTTTGGATTATTGCAATTGTCTTCGAGAAATTAGAGGGATGCCACCAAACATAGAACATTTCTCTGCAAGAAACTGTAAATCCTTGACTTCTTGTAGAAGCACATTACTGAATCAGAAACTGCATGAAGCTGGAAACACCATGTTTTGGTTGTCAGGAACATGGTTTCCAGAGTGGTTCGAGCACCACAGCAAGGGACTGTCTAATTCTTTCTGGTTTCGTGATAAGTTTCCTGCCATAGCTCTTTGTACTGCTATTGGACCAACGCGTGAACAGATTACAATTGTTGGACCTATTGTGATCATCAATGGCATTGAATGTTCGGTTGATGATGAGGATGATTCCTATTTATGGATGGAGACTGATCATACATATCTTTTTGATCTGCAAAAGATAAATTTCGCAGATAATTTGGACAAAGAACTTGTAGAAAATGAATGGAACCATGTGGAGATTACATACTCAGTCATATCCAATGAAAAGGAAAAACATGTGGAGATTCCAGTCTTTATAGAAAGTGGAATCTATATATTCAAACAGAGGAGTAGAATGGAGGATATTCGATTCACTGATCCTTATAAAAGGAGAAAATTAGATGATGGTTTGGAATCATAA 3174 0.3781 MAVRSCSSSFTYAFTYDVFLSFRGSDTRHGFVGNLFKALQDKGIHTFIDDEGLQRGEEISPALVKAIEESRIAIAVLSNNYAYSSFCLDELAHILECVKRKDTLVLPLFYDVDPSHVRYQRGSYGEALASHGERFKHNMEKLQKWKMALHHVANLSGYHFKHGDGYEYEFIGRIVELVSNKINRAPLHVADYPVGLESQVLEVRKLLDVGSDDGVLMIGIHGIGGIGKTTLALAVYNLIADHFDGLCFLENVRENSDKHGLQHLQSILLSEILGETKIKLASVKQGISILQHRLQRQKVLLILDDVDKHEQLNAIVGKPDWFGPGSRVIITTRDKHLLACHEVKSTHEVKKLNKNDALQLLSWKAFKSEKVDPSYVDVMNCAVAYASGHPLALEVIGSNLFGKSIEQWKSAINQYKRIPNCHILKILKVSFDALEEEEKSVFLDIACCFKGYNLEEVEDILHAHYGDSMKYHIGLLVEKSLIKLTWAGGVTLHDLIEDMGKEIVRQKSPKDPGKRSRLWLPEDIIHVFEHDSGTGEIEIIRLASSLLDKEEIIKWNRKAFKKMKNLKTLIIKNGHFSKGPKHLPNSLRVLEWAKYPSQGFPANFCSKKLSICKLPKSCFSLELADLSEFMNMSVLNFDECEGLTQIPDVSGLQNLEKFSFKNCENLITIHDSIGFLHKLKFLNAIGCRKLRSFPPLKLTSLEKLELSYCSNLECFPEILGKMENITELVLEASAIKELPFSFQNLTGLQILQLRLGGMIRLPSSIVMMPKLTEIIAWDWKGLLWPRQVEGEEKVSSMVSSNVDCLCLSGCNLSDQFLPVALSWFVNVKDLDLSRNKFTVLPECISECHFLWKLILDYCNCLREIRGMPPNIEHFSARNCKSLTSCRSTLLNQKLHEAGNTMFWLSGTWFPEWFEHHSKGLSNSFWFRDKFPAIALCTAIGPTREQITIVGPIVIINGIECSVDDEDDSYLWMETDHTYLFDLQKINFADNLDKELVENEWNHVEITYSVISNEKEKHVEIPVFIESGIYIFKQRSRMEDIRFTDPYKRRKLDDGLES* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0911 1057 Gene3D - 15 180 IPR035897 -
Apr6g0911 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 445 IPR027417 -
Apr6g0911 1057 PANTHER ARCHAEAL ATPASE 26 1007 - -
Apr6g0911 1057 SMART till_3 15 155 IPR000157 GO:0007165
Apr6g0911 1057 Gene3D - 181 347 IPR027417 -
Apr6g0911 1057 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 1007 IPR044974 GO:0006952
Apr6g0911 1057 SUPERFAMILY L domain-like 545 890 - -
Apr6g0911 1057 Pfam TIR domain 16 184 IPR000157 GO:0007165
Apr6g0911 1057 Gene3D - 351 435 IPR042197 -
Apr6g0911 1057 Gene3D Ribonuclease Inhibitor 716 900 IPR032675 -
Apr6g0911 1057 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Apr6g0911 1057 PRINTS Disease resistance protein signature 217 232 - -
Apr6g0911 1057 PRINTS Disease resistance protein signature 293 307 - -
Apr6g0911 1057 PRINTS Disease resistance protein signature 386 400 - -
Apr6g0911 1057 PRINTS Disease resistance protein signature 696 712 - -
Apr6g0911 1057 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Apr6g0911 1057 SUPERFAMILY "Winged helix" DNA-binding domain 423 528 IPR036390 -
Apr6g0911 1057 Pfam NB-ARC domain 198 417 IPR002182 GO:0043531
Apr6g0911 1057 Gene3D Ribonuclease Inhibitor 536 715 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0911 Apr-Chr6 13532059 13538466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0911 10 855 WRKY Transcription Factor Family AT4G12020 30.375 7.51e-82 291