Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0882 ATGGCTGCCTCATCCTCCTCCAATTCTTCTTTTAGCCATGGATGGTTTTACCATGTTTTCTTGAGCTTTAGAGGTGAAGATACCCGTGACACTTTTGCTGGCAACCTTTACAATGCTCTTGATCAAAGGGGAATCAACACTTTCATAGATGATGAAGGATTGAGGATTGGAGAAGAGATTTCACCATCTCTTCTTAGAGCAATAGAAGAGTCCATGATTTCCATCATCATATTCTCCAAGAACTATGCTTCTTCAACTTGGTGCCTTGATGAACTAGTGAAGATCCTTGAGTGTAAGAAGTATAGGGGACAAGTGGTTTTCTTAGTTTTCTATAATGTGAGTCCTGCCAATGTGCGGCACCAGAAAGGAAGTTATGAAGAAGCATTTGTTAAGCTTGAAGAAAGATTCAAAGAGAACAAGGAAAAGGTGCAGAAATGGAGATCAGCTTTGTCTGAAGCAGCAAACTTGTCTGGCTGGCATTTCAGTAATGGGTATGAATTTAAATTTATCCAGAAAATAGTGGATGAGGTATCAAGAAAGTTGAATCGCATCCCACTAAATGTTGCTAGACACCCTGTGGGACTCCAAGCTCGTGTATCGGATGTAAATTCACTATTAGAACTTGGATGTGATGATGTTAGAATGGTAGGAATTTATGGCATTGGTGGAATTGGTAAAACAACAATTGCTAAAGCTGTGTATAACACAGTATCTGATCAATTTCAACATGCCAGTTTTCTAGCAAATGTTAGAGAAAATGCAAGCCATAGGTCTGGCTTAGTTAAACTCCAAGAGAAACTTCTATTTGAGATACTTGGAGAGAAAACAATAAAGTTGGGCAATGTTGACAAAGGAATCAATATAATAAAAGAGAGGCTATGTAGGAAAAGAGTTCTACTTGTTCTTGATAATGTGGATGATGTGGAACAACTACAAGCATTGGCTGGAGGATTAGATTGGTTTGGTCTTGGAAGTAGGATTATTATAACTACAAGGGATAAACATTTGCTAACTGCTCATCAAATTGATTTGGCTTATGAGGTAAAGAAGTTAAATCATCTTGAAGCTCTTCAACTATTTAGTTGGAATGCCTTCAAACAAGGTGAGCCTGATGCAAGGTACTTCGACATTTCAAATCGTGCCGTATGTTATGCAGAGGGTCTTCCATTGGCTTTGAAAATATTAGGTTCTGATTTGTGTGGTAGAAGTATTCATCAATGGGAGTCTGCATTGGATAAATATAAGAGAACTCCAAATAGGAAAGTTCAGGATATACTTAAAATAAGCTTTGATGGGTTAGAGGAAAATGAAAAGGAAATTTTCCTATACATTGCATGTTTCTTCAAAGGAGAGATAATGGAATATGCTGTAAAAGCATTACGTGCTTGTGATCTGCATCCTGCTATTGGTATTGCAATACTTGTAGATAAGTCTCTCATAAATGTCGATGAAAGAGGAACGTTGTCGATGCATGATCTTATACAAGACATGGGTAAGGAAATTGTTAGGCAGGAATCACCATTAGATCCTGGACAACGCAGCAGGCTATGGTATTATGAGGATGTGCTTCAAGTACTGACCGAAGGGAAGGGAACTGACAAGATTCAAGGTATAATGCTGAACATGCCTGAAAAGCAAGAGGTGCAGCTAAAAGCTCAAGACCTCAAAAGGATGAAAAACCTTAGAATGCTAATAGTTCGTAATGCTGAATTTTTTGGAGGACTTGTACATCTACCAACCAATCTAAGGATGCTTGACTGGGAGGAATACCCTTCTACATGTTTACCATCTGATTTCCTCCCAGAGAAAATTGTAATGCTAGAGTTGAAGCATAGTCACCTAACATTGGATAGGCCATTTAAGAAACATGTAAATTTGACTTCTCTGAATTTAAGTTCCTGTGAATTTCTGACAAAAATACCTGATATTTCTGGAATCCCAAATTTAGAGCAATTGATTCTTGAAGATTGTACAGGTTTAGTTGAGATTCATGAATCACTTGGATCACTTGATAAACTAGTTTATTTAGGTGTTGAAAGGTGCACCGACCTAAAAAAATTACCATGTGTCCTCCAGTTGCCATCTTTAGCATGCATTGCTCTTAATGGGTGTTCTCAACTTGAAAAGTTCCCAGCTTTGTTGGGAAAAATGGAAAATCTGAGAATTATTGAGATGGAGGAGACAGCTATACAAGAACTGCCTTCTTATATAGTCAATTTCAGCAGCCTTGAGATTTTAGTTCTAAAATGCTGCTCAAATCTTAAGGACCTTCCTAGAGCCATTGATATGTTGCCAAATCTTCAGTTACTTGATATTTCTGGCTGTCCACATCTTCAACTATTTCCAGAGAAGATCTGTTGTTGCTGCACACAACATTGCTCAACTCTGCACCCTCAGTCTAATGAAAGTTCATCAAATTTAGAGTTACTAACAGCAGGTCCAGAACCATGTTTAGATTTAATCTCTCCTGGCATCCATTCCTCATATGGATTCCCTTTGTTGGACAGCCTTGATCTCTGCGGCTGCAATCTATCCGACAAAGATCTACATATCCTTAGTTTCCTTTCCAACCTTACATCCTTAGACATATCAAGAAACCATTTTGTAACCTTACCGAAATGCTTCAACAGACTTTGTAGCTTGCAGGAGCTTTACATGGCCAATTGCAGAAATGTTCAATACATTTCTGGGATTCCACCAAATTTAGAACATATAGATGCCACTAGTTGCACACTGCTGAATTTACAGTCATTGAGCCTACTATTAAGTCAGAGATTCTACAAGACTGGAAAATACGAAGTTATAGCACCAAGGCCAGTGATACCATTGCAATTTAGCTGTCAAAGCAAAGGAGGATCGTTGTCATTCTGGATAGGCCAGAAGTTCCCTAGAATTGCTCTGTGTTTCATTTTTGGACTAGGAAATAAAATTATTGGATTTTTCACCTGTGAAGTTCAGCTTTTTATTAATGGACAGAAAGCATCCAATAGAGTACAGCACTTTCTTTCAGTATGTGGAGATCTTGCATGGATGTATCATCAAGAAGATGTGATGGATTTAAATACATATTTATTGCATGAACAGAATCATGTGGAAGTTTCTTGTGAAATCGTTGATACTAGTAAAGCTGCAAAAGTGATGGTATACTGTAGTGGTGTTCATGAATATAAGGAAGATGAGGAATTGAAAAAACGAAATTTGATGTTGTGCACAAGTTCTAATCCTAGTAGTAGTGACACTGGAGTGATTTATATTGATAACGAGTACTTCGATAACACTCAATTTGCTAGGGAAACCGATAATTATGATGGTAACCCGGGAATTGATTGCTGGTCACTGGCTGAAAATTTGAGGATTCATGAAATATCAGATGAGCAGATGCAACAAATTTCAGCTTCAATCAACCCAGGAATGCTCGAAGATAACGATTTGATGGACCAGAATAAGAGAAGAAATGGAGATGTTCTGTGGGCTGATGAAATGCATCAAAACAAGGAGATGTCTTTGTTGCATCTTCAGCTATATAATGATATAACCTGGGATCCGATGCTATTAGAATGTCAGTTAAACCACATGACAGAGAATCAACCTTTTCCTATTGACTGTCAAGACAAAGAAGTCAGGCCAACACAGGGTAGGGATCTAGCTCCTACCAAAGCTGTAATAGAAGCTTCCAAAACAGTTGTTCTTAAGGAGGACTCAGAATCTCATATGAAAATAAGAACAGAATATGTGGAGTCACAGAGAACAGCAGAGGCACCAATTATTGCTACAAATCGTGTACAAGACATGGGAGATCAACATGATCATAGAAACAGCTTCCCTCAAACAAGCATCCCCCAATTCTATGTTGAGCTCTCTGAAAACTCTTTCTATTTGAGAAACAGAAAACAGAATTCATGGCATGAGGCTGAAGCTTCCATATCATCCACTTGTAAGTCAGAGCCAACTCAGAAAGTGCCCCCTACTATCCATCCTGCAGAGAATATTGTACTAGTTGATCAAGAATCGGAGCTAGAAGGACCTTCAGTGAAGGAATATGAAACTAAGAGGGATGAAATTAAAGTGATTCCATTGGAATACAAAACATGTCAGTTTGACCTAAACCTGAGAGATGACAACATGGAAGCATTTTATGCTGCCCTCCATGCTGAAACCACTCCATTCTCTTTAGCATTAGGAGATGATGATGATGTCTCACTGAATTTAAAGTCTCTAATAATTCAACTTTCAGCAGACTTTAGCCAGTGGAGTTGGGACTATATTGATGCAACCATGAAACTTAAGTCCTCAACAGCAGGTCTATCAAAGCTAGATACACTAGAAGAGGGTCTAATAGCGAACAAGAACCAGTTCATGGCTAGGGACACTGCTCTTAGAAAGAAAAGAGAAACCTTTGAGGAAGGAAGAATGTTGAAAGCTCAAAGAGATGAGTTGAGGAAGCGGAGGCCGCGATTGAGAGCAGAGCAAGAATCAGCAAAATCTACCAAAGCAAACATTGAGGATGAGTGGTCAAAGATTAGAGAGAAGTTTGACAAAATCTTGCATATTCTTGGGAGTTGA 4563 0.3853 MAASSSSNSSFSHGWFYHVFLSFRGEDTRDTFAGNLYNALDQRGINTFIDDEGLRIGEEISPSLLRAIEESMISIIIFSKNYASSTWCLDELVKILECKKYRGQVVFLVFYNVSPANVRHQKGSYEEAFVKLEERFKENKEKVQKWRSALSEAANLSGWHFSNGYEFKFIQKIVDEVSRKLNRIPLNVARHPVGLQARVSDVNSLLELGCDDVRMVGIYGIGGIGKTTIAKAVYNTVSDQFQHASFLANVRENASHRSGLVKLQEKLLFEILGEKTIKLGNVDKGINIIKERLCRKRVLLVLDNVDDVEQLQALAGGLDWFGLGSRIIITTRDKHLLTAHQIDLAYEVKKLNHLEALQLFSWNAFKQGEPDARYFDISNRAVCYAEGLPLALKILGSDLCGRSIHQWESALDKYKRTPNRKVQDILKISFDGLEENEKEIFLYIACFFKGEIMEYAVKALRACDLHPAIGIAILVDKSLINVDERGTLSMHDLIQDMGKEIVRQESPLDPGQRSRLWYYEDVLQVLTEGKGTDKIQGIMLNMPEKQEVQLKAQDLKRMKNLRMLIVRNAEFFGGLVHLPTNLRMLDWEEYPSTCLPSDFLPEKIVMLELKHSHLTLDRPFKKHVNLTSLNLSSCEFLTKIPDISGIPNLEQLILEDCTGLVEIHESLGSLDKLVYLGVERCTDLKKLPCVLQLPSLACIALNGCSQLEKFPALLGKMENLRIIEMEETAIQELPSYIVNFSSLEILVLKCCSNLKDLPRAIDMLPNLQLLDISGCPHLQLFPEKICCCCTQHCSTLHPQSNESSSNLELLTAGPEPCLDLISPGIHSSYGFPLLDSLDLCGCNLSDKDLHILSFLSNLTSLDISRNHFVTLPKCFNRLCSLQELYMANCRNVQYISGIPPNLEHIDATSCTLLNLQSLSLLLSQRFYKTGKYEVIAPRPVIPLQFSCQSKGGSLSFWIGQKFPRIALCFIFGLGNKIIGFFTCEVQLFINGQKASNRVQHFLSVCGDLAWMYHQEDVMDLNTYLLHEQNHVEVSCEIVDTSKAAKVMVYCSGVHEYKEDEELKKRNLMLCTSSNPSSSDTGVIYIDNEYFDNTQFARETDNYDGNPGIDCWSLAENLRIHEISDEQMQQISASINPGMLEDNDLMDQNKRRNGDVLWADEMHQNKEMSLLHLQLYNDITWDPMLLECQLNHMTENQPFPIDCQDKEVRPTQGRDLAPTKAVIEASKTVVLKEDSESHMKIRTEYVESQRTAEAPIIATNRVQDMGDQHDHRNSFPQTSIPQFYVELSENSFYLRNRKQNSWHEAEASISSTCKSEPTQKVPPTIHPAENIVLVDQESELEGPSVKEYETKRDEIKVIPLEYKTCQFDLNLRDDNMEAFYAALHAETTPFSLALGDDDDVSLNLKSLIIQLSADFSQWSWDYIDATMKLKSSTAGLSKLDTLEEGLIANKNQFMARDTALRKKRETFEEGRMLKAQRDELRKRRPRLRAEQESAKSTKANIEDEWSKIREKFDKILHILGS* 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0882 1520 Pfam Leucine rich repeat 833 889 IPR001611 GO:0005515
Apr6g0882 1520 Gene3D - 185 345 IPR027417 -
Apr6g0882 1520 SUPERFAMILY L domain-like 490 926 - -
Apr6g0882 1520 PRINTS Disease resistance protein signature 215 230 - -
Apr6g0882 1520 PRINTS Disease resistance protein signature 292 306 - -
Apr6g0882 1520 PRINTS Disease resistance protein signature 385 399 - -
Apr6g0882 1520 PRINTS Disease resistance protein signature 762 778 - -
Apr6g0882 1520 Pfam NB-ARC domain 210 420 IPR002182 GO:0043531
Apr6g0882 1520 Pfam TIR domain 17 185 IPR000157 GO:0007165
Apr6g0882 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 444 IPR027417 -
Apr6g0882 1520 Gene3D - 11 184 IPR035897 -
Apr6g0882 1520 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 818 1491 IPR044974 GO:0006952
Apr6g0882 1520 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 706 IPR044974 GO:0006952
Apr6g0882 1520 Gene3D - 350 434 IPR042197 -
Apr6g0882 1520 Gene3D Ribonuclease Inhibitor 818 933 IPR032675 -
Apr6g0882 1520 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Apr6g0882 1520 SMART till_3 16 156 IPR000157 GO:0007165
Apr6g0882 1520 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 818 1491 - -
Apr6g0882 1520 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 706 - -
Apr6g0882 1520 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 159 IPR035897 -
Apr6g0882 1520 Gene3D Ribonuclease Inhibitor 547 690 IPR032675 -
Apr6g0882 1520 Gene3D Ribonuclease Inhibitor 691 813 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0882 Apr-Chr6 13297361 13304299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0882 11 783 WRKY Transcription Factor Family AT4G12020 31.321 5.21e-95 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0882 - - lja:Lj0g3v0340619.1 2011.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0882 6 13297361 13304299 Apr6g0882 6 13297361 13304299 ECH