Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0880 ATGGCTGAACGATCATCATCCTCTTCCTTCAGTTATAAATTCACCTATGATGTTTTCCTCAGTTTCAAAGGCTCTGATACTCGCCTCGGTTTTACTGGGCATCTTTGGAAAGCTCTTCATGACAAGGGAATCCACACCTTCATTGATGACCGGGAGCTTCAAAGAGGAGATGAAATAACAGCATCACTTGTCAAGGCAATTCAAGAGTCAAGGATTGCCATTCCTGTCTTCTCTAAGGATTATGCATCTTCTTCTTTTTGTTTAGATGAACTTGTCAACATCATTGAACGTGTTAAGGCAAAGGGTCGGTTGGTTTTGCCAATTTTTTATGACGTTGATCCTTCCCACTTGCGACATCAAATGGGTATTTATGGAGAAGCATTGGCTAAGCATGAAGCAAGGTTCGCAAATGATGTAGAAAATTTGAATGATAACATGGATAGGTTGCGCAAATGGAAGATGGCTCTCAACCAAGCAGCTAGTTTGTCTGGCCACCATTTCAAACATGGGCATGAATATGAACATGTATTTATTGGGAGGATAGTGAAAGTGGTCTCCAACAAGATTAATCGTGCTCCTTTACATGTAGCAGATTATCCTGTTGGATTGGAGTCTCGAGTGCAAGAAGTAAAATCACTTCTGGAATTTGGATCTGATGGTGGAGTTCACATGGTAGGAATTTATGGAATTGGAGGAATTGGAAAAACAACACTTGCTCGAGCGCTTTATAATTCCATTGCTGATCTTTTTGAAGGTCTATGTTTTCTCGGTGATGTGAGAGAAAATTCAACTAAAGGTGGATTAGTACATCTCCAAGAAATGTTTCTTTCTGAAACGGTTGGAGAAAAAGATATTAAGATAGCAGATGTCGGTAAAGGAATTTCAATGATAATCCATAGGCTCCGGCAAAAAAAGGTTCTCTTAGTTCTTGATGATGTTGACAAACCAGAACAATTGCGAGCAATTATTGGTAGGCCAAATTGGTTTGGTTCTGGAAGCAGAGTCATCATAACAACTCGGGATAAACATTTGCTAACAAGGCATGGGGTTGAGCGAAAATATGAGGTAGATGATTTAAATGACAAAGAAGCACTTGAATTACTTAGGTGGACTGCTTTTAAGGGTGGAAATTTTAATTCAAATTACATTGACATCTTAAATCAAACAATAGCTTATGCTTCTGGCCTTCCACTTGCTTTGGAAGTAATAGGCTCCAACTTATTTGGAAAGAGTGTAGAAGAATGGAAATATGCATTAGATAGATATGAAAGGATTCCTTATAAAGAGATGCAAAATATACTTAAAGTGAGCTTTGATGCTTTGGAGGAAGAAGAGAAAAATGTTTTTCTTGACATTGCTTGCTGCTTCAAATGGTATCCATTGGCAGAGGTTGAACATTTACTTCATGCACACCATGGTGATAGCATGAAACATCACATTGAGTTGTTGGTTGAAAAGTCTCTCATTAAAATTAGTCCGTCTCATGCTGTCATGTTACATAGCTTGATAGAAGACATGGGTAAAGAAATTGTACGACAAGAATCATTAGAAGAGCCTGGAAAACGCAGTAGATTATGGTTCCCTAAAGATATTGTTCAAGTTTTACAAGACAATACAGGAACTAATAAAGTTGAAATCATATATCTAGATTTTCCCTTATTCGAAGAAGAAGCAAATGTAAAATGGGATGGAGAAGCCTTCAAGAAGATGGAAAATCTTAAAACACTTATAATTAAAAGAGGTAGCTTTTGCGAAGGTCCTAGACAGTTTCCAAATAGTTTAAGAGTACTAGAATGGGTGAAATACCCTTCAAAGTATTTACCACATGATTTTCAACCTAAGAAACTAGTCATATGCAAGTTACCTAATACATGGATTACATCACTCGAGTTGGTTGGCTTATTGAAGAAGGCAAGTAAATTCATGAATATCAGAGTTCTGGATATTAGCTTGTCTGAGTGTTTAACAGATATACCTGATGTATCTGGTCTCCCAAATTTAGAAGAATTTTCATTTAGACGTTGTTATAATTTGATTAAAGTCGATGATTCAATTGGGTTCCTAGATAAACTTAGAATCCTGAATGCTTCTAGTTGCATCAAGCTCATTAGTTTTCCACCCATCAAGTTGACCTCCCTTGAAAGTCTTCAACTCTCATATTGCTTTAGTCTGCAGAGTTTTCCAGAAATATTAGGAAAAATGGAAAAGATAACAGAGCTTACAATTTCTAATGTTCCCTTGAAAGGGTTGCCATTTTCGTTTCGAAATCTTACTCGGCTTCAAAAATTAAATATTAGTGACTGTGCAATGTCATTTTGCTTACCGAGTAGCATTGTCATGATGCAAGAATTAGCTGTGATCACCGTGGAGAATATGTGGCTATTGGCGAACCTGCATGAGGGAGAAGAAAAAGTGAGCACAATGGTGTCATCAAACGCAGATCATCTTCAAATGATTAACTGCTATGTGTCAGATGAATTTTTTTCTACATGTCTAACATGGTTTACTAATGTGAAAACGTTAGAGCTGATTGGGATTCATACTTTCACATTTGTTCCTGAAAGCATTAAAGAATGTCGCTTTTTGAAAAGGCTTAAATTGGATGTTTGTAATCAAGGTAGTTAA 2625 0.3691 MAERSSSSSFSYKFTYDVFLSFKGSDTRLGFTGHLWKALHDKGIHTFIDDRELQRGDEITASLVKAIQESRIAIPVFSKDYASSSFCLDELVNIIERVKAKGRLVLPIFYDVDPSHLRHQMGIYGEALAKHEARFANDVENLNDNMDRLRKWKMALNQAASLSGHHFKHGHEYEHVFIGRIVKVVSNKINRAPLHVADYPVGLESRVQEVKSLLEFGSDGGVHMVGIYGIGGIGKTTLARALYNSIADLFEGLCFLGDVRENSTKGGLVHLQEMFLSETVGEKDIKIADVGKGISMIIHRLRQKKVLLVLDDVDKPEQLRAIIGRPNWFGSGSRVIITTRDKHLLTRHGVERKYEVDDLNDKEALELLRWTAFKGGNFNSNYIDILNQTIAYASGLPLALEVIGSNLFGKSVEEWKYALDRYERIPYKEMQNILKVSFDALEEEEKNVFLDIACCFKWYPLAEVEHLLHAHHGDSMKHHIELLVEKSLIKISPSHAVMLHSLIEDMGKEIVRQESLEEPGKRSRLWFPKDIVQVLQDNTGTNKVEIIYLDFPLFEEEANVKWDGEAFKKMENLKTLIIKRGSFCEGPRQFPNSLRVLEWVKYPSKYLPHDFQPKKLVICKLPNTWITSLELVGLLKKASKFMNIRVLDISLSECLTDIPDVSGLPNLEEFSFRRCYNLIKVDDSIGFLDKLRILNASSCIKLISFPPIKLTSLESLQLSYCFSLQSFPEILGKMEKITELTISNVPLKGLPFSFRNLTRLQKLNISDCAMSFCLPSSIVMMQELAVITVENMWLLANLHEGEEKVSTMVSSNADHLQMINCYVSDEFFSTCLTWFTNVKTLELIGIHTFTFVPESIKECRFLKRLKLDVCNQGS* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0880 874 PRINTS Disease resistance protein signature 224 239 - -
Apr6g0880 874 PRINTS Disease resistance protein signature 300 314 - -
Apr6g0880 874 PRINTS Disease resistance protein signature 393 407 - -
Apr6g0880 874 PRINTS Disease resistance protein signature 708 724 - -
Apr6g0880 874 SUPERFAMILY "Winged helix" DNA-binding domain 429 536 IPR036390 -
Apr6g0880 874 Pfam TIR domain 16 192 IPR000157 GO:0007165
Apr6g0880 874 ProSiteProfiles TIR domain profile. 14 189 IPR000157 GO:0007165
Apr6g0880 874 PANTHER ARCHAEAL ATPASE 26 871 - -
Apr6g0880 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 452 IPR027417 -
Apr6g0880 874 Gene3D - 10 187 IPR035897 -
Apr6g0880 874 Coils Coil 139 159 - -
Apr6g0880 874 Gene3D - 188 352 IPR027417 -
Apr6g0880 874 SMART till_3 15 162 IPR000157 GO:0007165
Apr6g0880 874 Gene3D Ribonuclease Inhibitor 551 873 IPR032675 -
Apr6g0880 874 SUPERFAMILY L domain-like 561 871 - -
Apr6g0880 874 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 164 IPR035897 -
Apr6g0880 874 SMART AAA_5 221 360 IPR003593 -
Apr6g0880 874 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 871 IPR044974 GO:0006952
Apr6g0880 874 Gene3D - 358 442 IPR042197 -
Apr6g0880 874 Pfam NB-ARC domain 205 434 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0880 Apr-Chr6 13275489 13282203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0880 10 808 WRKY Transcription Factor Family AT4G12020 29.612 1.92e-76 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0880 - - gmx:100814962 1068.53