Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0879 ATGGATGTGCCATACTCTCCCTCTTCTTTCTGTTATGGATTCACCTACGATGTGTTCCTTAGTTTTAGAGGCTCTGATACTCGCTACGGTTTTACTGGCAATCTCTACAAAGCTCTTTGTGACAAGGGAATCCACACATTCATTGATGATGAGGAGATTCAAAGAGGAGATGAAATCACAGCATCACTTGCCAAGTCCATTGAAACCTCAAGGATTGCCATAATTGTCTTCTCTGAAAACTATGTTTCTTCTTCCTTTTGCTTAGATGAACTTGTCACCATAATTCACTGCATTAAGGTTAAAGGTCGGTTGGTTTGGCCGGTTTTTTACGACGTTGATCCTTCTGATGTGAGACATCAGAGAGGGAGTTATGGTGAAGCACTGGCTAAGCATGAGGAGAAGTTCAAGGATAACATGGAAAAGGTGCAGAATTGGAGGAAGGTTCTACAAGAAGCTGCTGACATGTCTGGCTGGCACTTCAAGCAATGGGATGGATATGAGCATGTGTTTATTGGAAAGATTGTTGAAGAGGTCTCAAGAAAGATTAATCGTGTTCCTTTATTAGTTGCTGATTACCCTGTTGGACTAGAGTCACAAGTGCAAAATATAATTTCGCTTCTGAATGTTGAGTGTGATGATAGAGTTCACGTGGTAGGGGTCCATGGCATGGGTGGTATTGGTAAAACAACCCTTGCTCTAGCAGTTTATAATTTCATTGCCGATAATTTTGAAGGTTTTTGTTTTCTGGAAAACGTTAGAGAAAATTCAAGCAAACGTGGGTTAGTACATCTCCAAAAGATCCTTCTTTATGAAATACTTGGAGAGAAGAAAATTAAGTTGGCAAGTGTTAGACAAGGAATTTCAACAATACAACATAGACTTCAAAAGAAGAAGATTCTTTTGATTCTAGACGATGTTGACCACTCACAACAGTTGGAGGCCCTTGTTGGAGGATTTGATAGGTTTGGTTCTGGCAGCAGAATTATAATTACAACCCGGGACAAACACTTGTTAGCAAGGCATGGGATTAACAAAATGTATGAGTTAAAGAAGTTAAATCATAAGGATGCTCTTCTATTGCTTAGTTGGAAAACTTTCCACACAGAAAAAATAGATCCAAGTTACATGGATGTCTTGAACCATGTTGTAACTTATGCTTCTGGACTTCCATTAGCTTTGGTAGTAATTGGTTCCAACATGTTTGGGAAAAGTATAGAAGAATGGAAATCTGCATTAGATCGGTACAGACGGATTCCTAATAAAGAGATCCAAAGGATACTAAAAGTTAGCTTTGATTCTTTGGAGCAAGATGAGCAGGGTGTTTTTCTTGACATTGCTTGTTGCTTTAAAGGGTATCATTTGGCTGAGGTAGAAGACATACTTCATGCTCATCACAGTAACTCCATGAAATATCAAATTGGAGTGTTGGTTGAAAAATCTCTCATAAAACTTGGGTTTTCTGGTGAGGTGACACTACATGACATGATAGAGGACATGGGTAAAGAAATTGTCCGGCAAGAATCAGCAAAAGAGCCTGGGAACCGCAGTAGGTTATGGTTCCATGAAGATATAGTCCAAGTTTTAGAAAACAATAGTGGAACTAGTAAAATTGAAATCATAAATCTTGATTTCTCTTCGCATAAAAATGGAGAAGCAGCAGAAGCAATAGTAGAATGGAATGGAGAGGTCTTCAAGAAGATGAGAAACCTAAGAACACTTATTATTAGAAATTGTCAATTTTCCAAAGGTCCAGAGCATCTTCCAAATAGTTTGAAAGTACTAGAATGGCAGGGATATCCTTCACAGCATTTACCGTCTGATTTTCATCCAAAGAAGCTTGTCATATGCAAATTACAAAATAGTTGCTTTACATCACTTGAGTGCGCTGGGTTAGCAAAGAAGTTCTCAAATATGAGAGTTCTAAAGCTTGACTGCTGTCAGTATTTAACACATATACATGACGTATCTTCTCTCCAAAATTTAGAAGAATTTTCATTTAGTGGGTGTAAGAATTTAATTACAATTGATGATTCAATTGGGTTCTTGAATAAACTTAAAATCTTGAATGCTGTAAATTGCATCAAGCTTGGCAGTTTTCCGCCCCTTAAACTGGCCTCTCTTGAAAAACTCGACCTTTCAGGTTGCTTGAGTCTTGAGAATTTTCCAGAAATATTAGGAGAGATGGAAAATATAAAATATCTTCATTTGCAAGCAACTGCCATAGAAGAACTTCCATTTTCATTTCAAAAGCTCACTCAGCTTAAATTTTTATATTTGTATAATCATGGAGTTGCTCAATTATCAAGTTGCATTGGCATGATGCCAAATCTGGCTCTGATTTCTGGTGTGGGATTGGAGGGGCAGCTATTGCTAAATCAGGACAACGGTGATGAAAAAGTGACCTCAATGTTGTCTTCAAATGTAGAACATCTTAATCTCCAAGACTGCAACCTGTCAGATGAATTTTTGGCATTAGGTCTCATGTGGTTTGCAAATGTGAAAGAGTTAGACCTATCCGCTAGTAATTTCAGTGTGCTCCCTGAATGCATAAAAAACTGTTGCTTTTTATGGAAGCTTGTTTTAAACAGGTGCAAGTGTCTTCGGGAAATTAGAGGAATTCCACCAAATGTAGAATATTTGTACGCAGGATGCTGTGAATCCATGACTCCGTGGAGTAGATGCTTCTTACTGAATCAGGAATTGCATGAGGCTAGACACACTGAGTTTTTGTTACCAAAAACTTCAATTCCAGAGTGGTTTGACTTCAAAATCATTGGAAAGTCGATATCTTTCTGGTTTCGGAGCACATTGCCTGCCATAGTTCTCTGTTTTATTTGTTCATCGATACAGCAAGATCCTGGTATAATGGTGACTCTCAATGGCCAAAAATATTTCCGGGGCCCAATATACACAAACTATTTCTTGGTGGGGCATACAATTCTTTTTAATATGAAAATGGAAGAATTAAATGACTCTGTTGCACTTCTAGAAAATGAATGGAACCATGGGATGGTTACATTTGAGGATATGCATATTCATCACAGAGAAATTGGAATCCATGTATTCAAACAAAAAAGCGGAAAGGATATTCGATTCACTGATCCTTATAGAAAGAGAAAATCAGATTGCACTATAGACTTGAATTCACCACCTCTTCTAGGGAAAAGTAGAAAGCCATGCTCTTTGAATGATGTTAATACTCAGATCACTCTTTAA 3216 0.3781 MDVPYSPSSFCYGFTYDVFLSFRGSDTRYGFTGNLYKALCDKGIHTFIDDEEIQRGDEITASLAKSIETSRIAIIVFSENYVSSSFCLDELVTIIHCIKVKGRLVWPVFYDVDPSDVRHQRGSYGEALAKHEEKFKDNMEKVQNWRKVLQEAADMSGWHFKQWDGYEHVFIGKIVEEVSRKINRVPLLVADYPVGLESQVQNIISLLNVECDDRVHVVGVHGMGGIGKTTLALAVYNFIADNFEGFCFLENVRENSSKRGLVHLQKILLYEILGEKKIKLASVRQGISTIQHRLQKKKILLILDDVDHSQQLEALVGGFDRFGSGSRIIITTRDKHLLARHGINKMYELKKLNHKDALLLLSWKTFHTEKIDPSYMDVLNHVVTYASGLPLALVVIGSNMFGKSIEEWKSALDRYRRIPNKEIQRILKVSFDSLEQDEQGVFLDIACCFKGYHLAEVEDILHAHHSNSMKYQIGVLVEKSLIKLGFSGEVTLHDMIEDMGKEIVRQESAKEPGNRSRLWFHEDIVQVLENNSGTSKIEIINLDFSSHKNGEAAEAIVEWNGEVFKKMRNLRTLIIRNCQFSKGPEHLPNSLKVLEWQGYPSQHLPSDFHPKKLVICKLQNSCFTSLECAGLAKKFSNMRVLKLDCCQYLTHIHDVSSLQNLEEFSFSGCKNLITIDDSIGFLNKLKILNAVNCIKLGSFPPLKLASLEKLDLSGCLSLENFPEILGEMENIKYLHLQATAIEELPFSFQKLTQLKFLYLYNHGVAQLSSCIGMMPNLALISGVGLEGQLLLNQDNGDEKVTSMLSSNVEHLNLQDCNLSDEFLALGLMWFANVKELDLSASNFSVLPECIKNCCFLWKLVLNRCKCLREIRGIPPNVEYLYAGCCESMTPWSRCFLLNQELHEARHTEFLLPKTSIPEWFDFKIIGKSISFWFRSTLPAIVLCFICSSIQQDPGIMVTLNGQKYFRGPIYTNYFLVGHTILFNMKMEELNDSVALLENEWNHGMVTFEDMHIHHREIGIHVFKQKSGKDIRFTDPYRKRKSDCTIDLNSPPLLGKSRKPCSLNDVNTQITL* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0879 1071 SMART till_3 15 155 IPR000157 GO:0007165
Apr6g0879 1071 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Apr6g0879 1071 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 1006 IPR044974 GO:0006952
Apr6g0879 1071 Gene3D - 351 435 IPR042197 -
Apr6g0879 1071 PRINTS Disease resistance protein signature 217 232 - -
Apr6g0879 1071 PRINTS Disease resistance protein signature 293 307 - -
Apr6g0879 1071 PRINTS Disease resistance protein signature 386 400 - -
Apr6g0879 1071 PRINTS Disease resistance protein signature 702 718 - -
Apr6g0879 1071 Pfam NB-ARC domain 197 427 IPR002182 GO:0043531
Apr6g0879 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Apr6g0879 1071 Gene3D Ribonuclease Inhibitor 721 907 IPR032675 -
Apr6g0879 1071 SMART AAA_5 214 352 IPR003593 -
Apr6g0879 1071 SUPERFAMILY "Winged helix" DNA-binding domain 421 529 IPR036390 -
Apr6g0879 1071 Pfam TIR domain 16 183 IPR000157 GO:0007165
Apr6g0879 1071 Gene3D Ribonuclease Inhibitor 532 720 IPR032675 -
Apr6g0879 1071 Gene3D - 179 345 IPR027417 -
Apr6g0879 1071 Gene3D - 13 178 IPR035897 -
Apr6g0879 1071 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Apr6g0879 1071 PANTHER ARCHAEAL ATPASE 26 1006 - -
Apr6g0879 1071 SUPERFAMILY L domain-like 564 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0879 Apr-Chr6 13270053 13274667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0879 4 761 WRKY Transcription Factor Family AT4G12020 31.626 1.70e-83 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0879 - - gmx:100780257 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0879 6 13270053 13274667 Apr6g0879 6 13270053 13274667 ECH