Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0878 ATGTTAGGAACTGCATCTTTGTCTTCCTCTTCCTTCACCTATCGATCCACCTATGATGTGTTCCTCAGCTCCCATATTGATACTCATCACAGTTTTACTCGGAATCTCTACAAAGCTCTTTTTGACAGGGGAATCTACACTTTCATTGTCGATGAGGAGCTTCGAGTAGGGGGTGGAATTAGACCATCACTTGTGAAGGCCATTCAAGAGTCCAGGATTGGCATCATCGTCTTCTCTAAGAACTATGCATTTTCCTCATTTTGCTTGGATGAACTTGTCAAGGTCATTGAGTGCAGTAAGGAGTACTACCGGTTGGTTTGGCCGGTTTTTTACGACGTTGATCCTTCTGACGTGAAATATCAGAGAGGGACTTATGGAGAAGCACTGGCTAAGCATGAGCAGCAGTTCAAGGAGAACTCTGACAAAGTGCAGGGATGGAGGATGGCTCTGTGTCAAGCAGCTAGCTTGCCTGGATGGATTTTCAAACCTAGGGATGGATATGAAGACAAGTTTATTGGGACCATAGTTAAAGAGGTCTCCAACAAAATTAATCGCATTCCTTTACATGTTGCGGATTACCCAGTTGAACTGGAACCTCGGGTGCGAGAAGTATGCTTGTTGCTGGATGTTGGATCTAATGATGGAATGCACATGGTAGGGATCTATGGAATGGGCGGAATTGGCAAGACAACTCTTGCTCGAGCAGTTTATAATGTCACTGCAGACAAATTTGAAGGTTCATGTTATCTTGATAATGTGAGAGAAAATTCAGCTAAACATGGATTAGTGCACCTTCAAGAGAGGCTTCTTTCTGAGATATGTGGAGAGAAAGATATTAGGTTAAAAAGTGTCAATCAGGGGATCTCAGCAATAAAGCATAGGCTCCAGGATAAGAGGGCTCTTCTGATTCTAGACGATGTAGACAAAGTGGAGCAATTGGAGGCCTTAGTTGGACGATATGATTGGTTTGGTCATGGTAGCAGAGTCATCATTACAACTCGGGATAGACATTTGCTAAGATCTCATGAGATTGAAAATATATATGAGGTAAAACTGTTAAATAACGTATCTGCTCTTGAATTGCTTACTTGGAATGCTTTCAAGCACGGGAAAGTCAGTTCAAGTTGCCAGGACATTTTAAACCAAGCAGTAACTTATGCTTCCGGCCACCCATTGGCTTTGGAAGTAATAGGTTCAAACTTGTTTGGGAAAAGTGTGGATGAATGGAGATATGCATTAGATAAATATAAAAGGATTACACGTAACGAGATCCAAATGACACTTAAAGTAAGCTATGATGCTTTGGAAGATGAAGAGAAGAGTGTTTTTCTCGACATTGCTTGTTGCTTCAAAGGATATGAATTGGCACAAATTGAAGATGTACTTTGTGCGCATTATGGTTACCACATGAAACATCATATCAAAATGTTGGATGAAAAGTCTCTAATAAGAATTACTTCGGATGGTAGGGTGGCTCTACATCCCTTGATAGAGGACATGGGTAAAGAAATTGTCCGCCAGGAATCACGGCGTGAGCCTGGGAGACGCAGTAGGTTATGGTTCTTTGAAGATATACTTGACGTTTTACTAGAAAATACAGGAACTAGTAAAATTGAAATTATACATTGGGATTTCTCCTTGTTGAAAGTAGTAGAATGGGATGGAATGGCCCTCGAAAAGATGAAAAACCTCAAAACACTTATAATTAGAAATGGTCATTTTTCTAGAGGTCCCAAGCATCTTCCAGATAGTTTAAGAGTACTGGAATGGTGGAGATATCCTTCGGAGGATTTACCATCTGATTTTAATCCAAGGAAGCTTGTCATATGCAAATTACCATATACTCGCACTATGTCACCCAACCTGGCCAAGTTACTGGAGAATTTACAAAGGGCTCCTGAAGTTTTGCAAACTTCACAGAGGGTTCCTGAAATCTCACAGGGTGTTCCTGAAGTTTTGCAGACTTCACAGATGGGGGTTCCTGAAGTTTCACATATGGTTTCTGAAGTTTTACAGGCTTCACAGAGCATTATTGATGTTTCGCAGACTTCAAAGAGTGCTCCTGAAGTTTCACAGATGCTTGTTCCTGAAGTTCTGCAAACTTCAACGAGTGCTCTTCAAGCCGAGATGATGTGGAGACTTGTTGGCCTTGTGTCAAGTATAGTTGGCCTTCTATGTTTTGCTCTGAGCCCTTCATTCCATCGTTTAATTGGACAATGGAACCCTTTCAAGTTCTCTCTTTACGCGCTGTTGTCCTTGGTTATTTGTGCCACGATACTATTTGCAAGGCAGTCCTCATTTTCAAAGAAGAATGTTAAGCTCAAAGCCTATTTGGGGTTTTCAGTTTTGATGGTCATGTCTGTGTACTCATATTTTTATGACAGAGCTGTGAGTGGGAAACCTGAAATACGGAGCTTGGTTGCAAATGCTGCCTTTGCTTTGATGTCACTGAGCTTGTCCAAACTGATTAAGTTTGGCTTTGAGATGGGTATATTTTGTTTCTTTCTAGGTTGCTTTACAATTCAACTGGTAACCATTGACTTTAAACTAATTTCAGTTGCCATAATCTTTGGTTGTCCACTCTTTATTATGCATTCCTCTTCAGATTACCAACCACAGGTTAGTAATCAAGGTCAAGATATTTATTCCTCTTCAGATTCCAGACCAGAGATTGTAGTGGAGGTCAACATGCCATAG 2697 0.4093 MLGTASLSSSSFTYRSTYDVFLSSHIDTHHSFTRNLYKALFDRGIYTFIVDEELRVGGGIRPSLVKAIQESRIGIIVFSKNYAFSSFCLDELVKVIECSKEYYRLVWPVFYDVDPSDVKYQRGTYGEALAKHEQQFKENSDKVQGWRMALCQAASLPGWIFKPRDGYEDKFIGTIVKEVSNKINRIPLHVADYPVELEPRVREVCLLLDVGSNDGMHMVGIYGMGGIGKTTLARAVYNVTADKFEGSCYLDNVRENSAKHGLVHLQERLLSEICGEKDIRLKSVNQGISAIKHRLQDKRALLILDDVDKVEQLEALVGRYDWFGHGSRVIITTRDRHLLRSHEIENIYEVKLLNNVSALELLTWNAFKHGKVSSSCQDILNQAVTYASGHPLALEVIGSNLFGKSVDEWRYALDKYKRITRNEIQMTLKVSYDALEDEEKSVFLDIACCFKGYELAQIEDVLCAHYGYHMKHHIKMLDEKSLIRITSDGRVALHPLIEDMGKEIVRQESRREPGRRSRLWFFEDILDVLLENTGTSKIEIIHWDFSLLKVVEWDGMALEKMKNLKTLIIRNGHFSRGPKHLPDSLRVLEWWRYPSEDLPSDFNPRKLVICKLPYTRTMSPNLAKLLENLQRAPEVLQTSQRVPEISQGVPEVLQTSQMGVPEVSHMVSEVLQASQSIIDVSQTSKSAPEVSQMLVPEVLQTSTSALQAEMMWRLVGLVSSIVGLLCFALSPSFHRLIGQWNPFKFSLYALLSLVICATILFARQSSFSKKNVKLKAYLGFSVLMVMSVYSYFYDRAVSGKPEIRSLVANAAFALMSLSLSKLIKFGFEMGIFCFFLGCFTIQLVTIDFKLISVAIIFGCPLFIMHSSSDYQPQVSNQGQDIYSSSDSRPEIVVEVNMP* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0878 898 Gene3D - 15 180 IPR035897 -
Apr6g0878 898 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 671 IPR044974 GO:0006952
Apr6g0878 898 SMART till_3 17 156 IPR000157 GO:0007165
Apr6g0878 898 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Apr6g0878 898 Pfam TIR domain 18 185 IPR000157 GO:0007165
Apr6g0878 898 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 25 671 - -
Apr6g0878 898 CDD AAA 221 348 - -
Apr6g0878 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 446 IPR027417 -
Apr6g0878 898 PRINTS Disease resistance protein signature 218 233 - -
Apr6g0878 898 PRINTS Disease resistance protein signature 294 308 - -
Apr6g0878 898 PRINTS Disease resistance protein signature 387 401 - -
Apr6g0878 898 PRINTS Disease resistance protein signature 559 575 - -
Apr6g0878 898 SUPERFAMILY "Winged helix" DNA-binding domain 423 529 IPR036390 -
Apr6g0878 898 Pfam NB-ARC domain 203 434 IPR002182 GO:0043531
Apr6g0878 898 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Apr6g0878 898 Gene3D - 181 347 IPR027417 -
Apr6g0878 898 Gene3D - 353 436 IPR042197 -
Apr6g0878 898 SMART AAA_5 215 354 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0878 Apr-Chr6 13258661 13264425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0878 12 613 WRKY Transcription Factor Family AT4G12020 29.618 3.25e-59 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0878 - - aprc:113866936 1778.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0878 6 13258661 13264425 Apr6g0878 6 13258661 13264425 ECH