Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0877 ATGGCAGGTGCTGAAACCTCATCTTCTTCTTCATTCAGTAATGGGTTTACCTATGATGTGTTCGTTAGCTTCAAAGGCTCAGACACTAGCCACAGTTTTACTGGCATTCTCTTTGAGGCTCTATGTGAGAGGGGAATCAACACCTTCATGGACAATGACGACGAAGAGTTTCAGATAGGAGAGGAAATCAGAGCAATTGAAAAGTCCAAGGTTGCCATCGTTGTGTTTTCTAAGAACTATGCATCTTCCTCGCGGAACTTGAATCAACTTGTCAACATCATTGAGTGCTGTAAAAAGAAAGGACGGTTGGTTATGCCGGTTTTTTATGACGTTGATCCTTCTGTCGTGCAAGATCAGAGAGGGGCTTATGGTCAAGCATTGGCTGAGCATGGGCGCAAGTTCAAGGATAACCCGGAGAAAGTGAAGAAGTGGAGGAGGGTTCTGAAAGAAGCTAGCTTGTTTGGCTGGTATTTGAAACCTGGGGTTGGATATGAATATGAATATGTCAAGAGCATTGTTGAAGAGGTCTTCAGGAGGATTACTAATCGTTCTTTGTTTGTAGCGGATTACACTATTGGACTAGACTCTCGAGTGGAAGAAGTATGCTCGCTTCTGTATATTGGATCTGCTGAAGTCCGCATGGTAGGGATCTATGGAATAGGTGGGATAGGTAAAACGATACTTGCTAAAGCAGTTTATAATGACATTGCAGATGGCTTTGAAGCATCATGTTTTCTTGGTAGTGTGAGAGAAATTTATGACAGACATGGATCTATGTTTCTCCAAGAGATGCTTCTTAATGAGATACTTGGAAAGAAAGATATTCGGTTAGGCAGTGTCGACGATGGAATCTCAATAATAAAGGAAAGGCTCCAACACAAGAGAGTTCTTTTGATTCTAGATGACATCAGCAAACTAGAGCAATTGGAGGCCTTGGCTGGAAGTTCTGATTGGTTTGGTTCTGGCAGTAGAGTTATCATTACAACTCGAAACAAACATTTGTTAACATATCACAGGGTTGAAATAACATACGAGGTACAGGAGTTAAATAATAAAGATGCTCTTGAATTGTTTAGTAGGTGTTCTTTTAAAGATGGCAAAATTGATCCAAGTTATGTGGACATTTCAAAACAAGCTATAGATTATGCTTCTGGCCATCCTCTGGCTTTGCGAGTAATAGGTTCCAACTTACTTGGAAGAAGTAAAGAAGAATGGGAACATGCATTGCAAAGGTTTAAAAGGATTCCTCTAGATGATATTCAAGATGTACTTAAAGTAAGCTTTGATGCATTGGAAGAAGAAGAAAAGAAGGTTTTTCTCGACATTGCTTGTTGTTTCAATGGATATAAATTGACAGAGGTTGAAGATATACTGTGTGCTCATCGTGGTGACCACATCAAACTTCTGATTAGAGTGTTGATAGATAAATCTCTGATAAGTATCAGTTCGAATAGTAAGCTGATACTACACTCCCTAATAGAGGACATGGGTAAAAATATTGTTTACCAGGAATCACCACATGAACCTGGGCAACGCAGTAGGTTATGGTTCTCTAAAGATATAATTGATGTACTACAAAAAAATACAGGATCTACAAAAATTGAAATTATACATTTGGGTTTCCCTTTATTGGAAGAAGAAGAAGTACAATGGAATGTAAAGGCCTTCAAGAAGATGAAAAACCTCAAAACACTTATTATTAGAAATGGTCAATTTTCTAGAGGTCCCAAGCATCTTCCTAATAGTTTAAAAGTATTGGAATGGTGGAGATATCCTTCAGAAGATTTACCATCTGATTTTGATCCAAAGAAGCTTGCCATTTTGAAATTACCAAATACTCACATTGTATCACCCGAGCTGGCTGAGTTACTTAAGAAGTTCTTGAATTTGAGAGCTCTGAATTTCGGCTATGGTCAATGCAAAACACATATTTCACATAGGGTTCCTGCTGAATTTTTGCAGACTTCACTAAGGATTCCTAAAAGCTCACCAAGTGTTCCTGAAATTTTACACACTTCACAAAGTTTTCCTGAAGTGCTGCAGACTTCACCAAGGATTCCTGAAAGCTCACCAAGTGTTCCTGACAGAGGGTTCTTGAAATTTTGCAGACTGAAAGGGTTTCTAAAATCTCACAAGGGTGACCGTGAAGTTTCACAAAGTTCTGAGCTTTTACCAATTTCAGAGAGGGACCTTAAAGTTTCACCAAGGGTTTTTCCTGAAGTTTTGAAGACTTTGAGGAGGGTTTTTCCTGAAGTTTTGAAGACTTTGAAGAGGGCCCTTCAAGCTGACATGAAGTGGAAACTTGTTGGCCTTGGGTCAAGTGTTACTGGCCTAACTTGTCATGCTCTTAGCCCTTCCTTCAATCGTTTAATTAAAGGGTGGAACTCTTTCAAGTTCGTTCTCTATGGGTTATTATCCTTGGTTATCTGTGCGACCATATTATTTGCAGGGCCTTGTTCACAGTCAAGGAGCCATGTTCAGCTCAAATCTTGCGTGGGATTTGCGGTTTTGATGATAATCTCTGTGTACTCATATTATTATGACAGAGCCGTGAATGGGAATCCTGAAATCTTGAGCTTGGTTTCAAATGCTTTATTTGCTTTGATGTCACTGAGTTTTTCCAAAAGAATTAAGTTTGGCTTTGAGATGGGTATATTCTGTTATTTCATAGGCTGCTTTGCAATTCAATTGGTGAGCATCAACTTCAAGCTGATTTTGGTTGCCATGTTCTATGGCTGTCCACTCTTCATCGTGCATTCTCAACCGGAGATTCAGAATGGAGGTTGA 2787 0.394 MAGAETSSSSSFSNGFTYDVFVSFKGSDTSHSFTGILFEALCERGINTFMDNDDEEFQIGEEIRAIEKSKVAIVVFSKNYASSSRNLNQLVNIIECCKKKGRLVMPVFYDVDPSVVQDQRGAYGQALAEHGRKFKDNPEKVKKWRRVLKEASLFGWYLKPGVGYEYEYVKSIVEEVFRRITNRSLFVADYTIGLDSRVEEVCSLLYIGSAEVRMVGIYGIGGIGKTILAKAVYNDIADGFEASCFLGSVREIYDRHGSMFLQEMLLNEILGKKDIRLGSVDDGISIIKERLQHKRVLLILDDISKLEQLEALAGSSDWFGSGSRVIITTRNKHLLTYHRVEITYEVQELNNKDALELFSRCSFKDGKIDPSYVDISKQAIDYASGHPLALRVIGSNLLGRSKEEWEHALQRFKRIPLDDIQDVLKVSFDALEEEEKKVFLDIACCFNGYKLTEVEDILCAHRGDHIKLLIRVLIDKSLISISSNSKLILHSLIEDMGKNIVYQESPHEPGQRSRLWFSKDIIDVLQKNTGSTKIEIIHLGFPLLEEEEVQWNVKAFKKMKNLKTLIIRNGQFSRGPKHLPNSLKVLEWWRYPSEDLPSDFDPKKLAILKLPNTHIVSPELAELLKKFLNLRALNFGYGQCKTHISHRVPAEFLQTSLRIPKSSPSVPEILHTSQSFPEVLQTSPRIPESSPSVPDRGFLKFCRLKGFLKSHKGDREVSQSSELLPISERDLKVSPRVFPEVLKTLRRVFPEVLKTLKRALQADMKWKLVGLGSSVTGLTCHALSPSFNRLIKGWNSFKFVLYGLLSLVICATILFAGPCSQSRSHVQLKSCVGFAVLMIISVYSYYYDRAVNGNPEILSLVSNALFALMSLSFSKRIKFGFEMGIFCYFIGCFAIQLVSINFKLILVAMFYGCPLFIVHSQPEIQNGG* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0877 928 SUPERFAMILY L domain-like 547 638 - -
Apr6g0877 928 Pfam TIR domain 18 176 IPR000157 GO:0007165
Apr6g0877 928 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 151 IPR035897 -
Apr6g0877 928 PRINTS Disease resistance protein signature 214 229 - -
Apr6g0877 928 PRINTS Disease resistance protein signature 290 304 - -
Apr6g0877 928 PRINTS Disease resistance protein signature 383 397 - -
Apr6g0877 928 PRINTS Disease resistance protein signature 557 573 - -
Apr6g0877 928 SMART till_3 17 154 IPR000157 GO:0007165
Apr6g0877 928 Pfam NB-ARC domain 197 421 IPR002182 GO:0043531
Apr6g0877 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 442 IPR027417 -
Apr6g0877 928 Gene3D - 185 343 IPR027417 -
Apr6g0877 928 SUPERFAMILY "Winged helix" DNA-binding domain 418 526 IPR036390 -
Apr6g0877 928 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 20 688 - -
Apr6g0877 928 Gene3D Ribonuclease Inhibitor 513 666 IPR032675 -
Apr6g0877 928 Gene3D - 348 432 IPR042197 -
Apr6g0877 928 Gene3D - 12 184 IPR035897 -
Apr6g0877 928 ProSiteProfiles TIR domain profile. 16 152 IPR000157 GO:0007165
Apr6g0877 928 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 688 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0877 Apr-Chr6 13252295 13256472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0877 12 613 WRKY Transcription Factor Family AT4G12020 31.230 6.45e-71 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0877 - - aprc:113866936 947.577