Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0869 ATGTCAATACCAGCCACATCATGCATGAAATTTCCGTGTTACAATTTTCTGATTTTGTTCTTCCTCCTTATCTATGCAAACTCACAATCTCAACTATATGATCAAGAACATTTAGTATTGCTGAATATAAAGCAATACTTGCAAAACCCACCTTTCCTTAGCCACTGGAATTCAAGTTCCGCTCACTGTTCTTGGCCAGAGATCAAATGCATCACTGGCTCTGTCACTGCCATTACTCTTTCCAACTCCAACATCACCCAAACTATACCATCCTTCATCTGTGACCTCACAAATCTCACACATGTTGACTTCAGCTACAACTCCATCCCTGGTGACTTCCCGAAACCCCTTTACAATTGTTCCAAGCTAGAGTACTTAGACCTATCAAGGAACAATTTTAATGGCATGATTCCTCATGACATTGACCATTTGAGTGCTAATTTGCAATATCTTAGCCTTGGTTCCACCAACTTCACTGGTGACATTCCTGCTAGTATTGGAAAGTTGAATCAGCTAATAGAACTTCATCTTGAATATTGCCTGTTCAATGGTTCTGTTCCTTCTGAGATTGAGAACTTGTCCAATCTTGAGTACTTGGATATGTCATCTAACTACAATTTCCCTGAGTGGAAATTGCCATGGAACTTGACAAAGTTCACCAAAATGAAGGTTTTTTATCTGTTTAGCACCAACTTGGTTGGAGAAATTCCTGAAACTATTGGAGATATGGTGGCTTTGGAGAAGCTTGATTTGTCACAAAATGGTGTAACTGGAGGAATTCCTAGTGGTTTGCTGTTGTTGAAGAATTTGACCACACTTTATCTTTATAATAATAGTTTTTCTGGGGAGATACCAAGTGTGGTTGAAGCATTGAACTTGATCAACCTTGATCTTACTAGGAACAATCTTGAAGGGAAAATACCAGATGATCTTGGAAAGCTCCAGCAGTTGTCATGGTTGGGTTTGTCTCTGAATAGCTTGTCAGGTGTGATACCAGAAAGCTTAGGCCGTCTTCCAAATCTTAAAGATTTTCGTGTGTTTTACAACAATTTATCCGGTACTCTTCCTCCTGATTTTGGCCGTTATTCAAAGCTTGAAACTTTTTTGATTGCCAATAATAGTTTTTCTGGAAAGTTGCCAGAGAATTTATGCTATTATGGTGTGCTACTTAATTTGTCTATTTATGAAAATAATCTGAATGGTGAATTGCCAGAATCATTGGGAAATTGCAGTAGTTTATTGGATCTGAAAATGCACAATAATGAGTTTTCTGGTAATATTCCTAGCGGTCTTTGGACTTCTTTCAATTTGTCAAATTTCATGGTGAGCCATAATAAGTTCACTGGTGTGCTTCCTGAAAGGTTGTCATGGAATGTTTCAAGGTTTGAGATAAGTTACAATCAGTTTTCTGGTAAAATTCCAAGTGGAGTATCTTCATGGACTAATTTGGTAGTGTTTGAGGCCAGTAAGAACTACTTCAATGGAAGTATTCCACAAGAGCTAACAGCTCTTCCCAAGTTGACAACCTTGTTGCTTGATCAGAACCAACTCACTGGGCCACTTCCATCAGATATAGTATCATGGAAATCCCTAGTAACTCTAAATTTGAGGCAAAACCAACTCTCTGGACAAATCCCTGATGCAATTGGTCAATTACCTGTCCTTAGTCAACTTGACTTGGCAGAAAATGAATTTTCTGGCCAAATTCCTTCTCTACTTCCTAGACTCACCAATCTTAATCTATCCTATAATCATTTGACAGGGAGGATTCCAATGGAATTTGAAAATCCTGTGTATGCTAGTAGCTTTTTGGGCAATTCTGGTCTTTGTGCTGATACCCCAGCATTGGACCTTACCTTATGCAATTCTAGCCTTCAAAGAACAAGTAAGGGATCATCTTGGTCTATAGGTTTGATAATAAGTTTGGTGGTAATAGCGTTGTTCTTGGCCCTTTTGGCATCACTCTTGATTATTAGATTTCATAGAAAAAGAAAGCAAGGATTGGATAATTCATGGAAGTTCATTTCCTTTCAAAGGCTGAATTTCACAGAATCGAGCATTGTCTCATCAATGACCGAACAAAATATAATTGGAAGTGGAGGTTATGGTACAGTATACCGCATTGATGTTGATGGTTTAGGCTATGTTGCTGTGAAAAAAATTTGGAATAACAAGAAGTTAGACCATAAACTTGAGAATTCATTCCGTGCAGAAGTTAGGATATTGAGCAGTATCCGTCATAACAACATTGTGAAGTTGATGTGTTGTATCTCTAATGAGGATTCTATGCTCTTGGTCTATGAGTACTTGGAAAATCATAGCTTAGATAAGTGGCTACAAAAGAAGAGTAAGTCATCATCTGTGCCAGGTTCAATGAACCATGTGGTCCTTGATTGGCCAAAGAGGTTGAAAATAGCTATTGGAATTGCTCAAGGTTTGAGCTACATGCACCATGATTGTTCACCACCTGTTGTTCATAGAGATGTGAAAACAAGCAACATCCTTTTGGATACTCAATTCAATGCAAAAGTTGCCGACTTTGGATTGGCAAAGATGTTAACCAAGCCTGGAGAAGTTAACACCATGTCAGCTGTGATTGGCTCATTTGGCTATATTGCTCCAGAATATGTTCAAACAACAAGAGTTAGTGAAAAGATTGATGTGTTTAGTTTTGGAGTTGTCCTATTGGAATTAGCAACTGGTAAAGAAGCTAATTATGGAGACCAACACTCATCCCTTTCAGAGTGGGCATGGCGTCACATTCTAGTAGGAAGCAATGTGGAAGAATTGCTAGATAAGGATGTAATGGAAGCTAGTTACTCAGATGAAATGTGCAGTGTTTTCAGACTAGGGGTCATGTGTACTGCAACATTGCCTGCCAGTAGACCTTCCATGAAGGAGGCCCTACAAATATTGCTCAGCTTAGGAGAATCATTTGCTTATGGAGAGAAGAATTATGGCCACTGTTATGATGCTATGCCCCTTCTTAAGAATTCAAAAAGTGACACTATGTTGGATGTTGATATATGA 3030 0.3858 MSIPATSCMKFPCYNFLILFFLLIYANSQSQLYDQEHLVLLNIKQYLQNPPFLSHWNSSSAHCSWPEIKCITGSVTAITLSNSNITQTIPSFICDLTNLTHVDFSYNSIPGDFPKPLYNCSKLEYLDLSRNNFNGMIPHDIDHLSANLQYLSLGSTNFTGDIPASIGKLNQLIELHLEYCLFNGSVPSEIENLSNLEYLDMSSNYNFPEWKLPWNLTKFTKMKVFYLFSTNLVGEIPETIGDMVALEKLDLSQNGVTGGIPSGLLLLKNLTTLYLYNNSFSGEIPSVVEALNLINLDLTRNNLEGKIPDDLGKLQQLSWLGLSLNSLSGVIPESLGRLPNLKDFRVFYNNLSGTLPPDFGRYSKLETFLIANNSFSGKLPENLCYYGVLLNLSIYENNLNGELPESLGNCSSLLDLKMHNNEFSGNIPSGLWTSFNLSNFMVSHNKFTGVLPERLSWNVSRFEISYNQFSGKIPSGVSSWTNLVVFEASKNYFNGSIPQELTALPKLTTLLLDQNQLTGPLPSDIVSWKSLVTLNLRQNQLSGQIPDAIGQLPVLSQLDLAENEFSGQIPSLLPRLTNLNLSYNHLTGRIPMEFENPVYASSFLGNSGLCADTPALDLTLCNSSLQRTSKGSSWSIGLIISLVVIALFLALLASLLIIRFHRKRKQGLDNSWKFISFQRLNFTESSIVSSMTEQNIIGSGGYGTVYRIDVDGLGYVAVKKIWNNKKLDHKLENSFRAEVRILSSIRHNNIVKLMCCISNEDSMLLVYEYLENHSLDKWLQKKSKSSSVPGSMNHVVLDWPKRLKIAIGIAQGLSYMHHDCSPPVVHRDVKTSNILLDTQFNAKVADFGLAKMLTKPGEVNTMSAVIGSFGYIAPEYVQTTRVSEKIDVFSFGVVLLELATGKEANYGDQHSSLSEWAWRHILVGSNVEELLDKDVMEASYSDEMCSVFRLGVMCTATLPASRPSMKEALQILLSLGESFAYGEKNYGHCYDAMPLLKNSKSDTMLDVDI* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0869 1009 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 1003 - -
Apr6g0869 1009 SMART serkin_6 691 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0869 1009 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515
Apr6g0869 1009 Gene3D Ribonuclease Inhibitor 147 207 IPR032675 -
Apr6g0869 1009 Pfam Protein kinase domain 693 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0869 1009 Pfam Leucine rich repeat 75 133 IPR001611 GO:0005515
Apr6g0869 1009 Gene3D Ribonuclease Inhibitor 364 628 IPR032675 -
Apr6g0869 1009 Gene3D Phosphorylase Kinase; domain 1 669 769 - -
Apr6g0869 1009 Pfam Leucine rich repeat N-terminal domain 35 70 IPR013210 -
Apr6g0869 1009 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 1003 - -
Apr6g0869 1009 Gene3D Ribonuclease Inhibitor 208 290 IPR032675 -
Apr6g0869 1009 Gene3D Ribonuclease Inhibitor 35 146 IPR032675 -
Apr6g0869 1009 Gene3D Ribonuclease Inhibitor 291 361 IPR032675 -
Apr6g0869 1009 SUPERFAMILY RNI-like 292 594 - -
Apr6g0869 1009 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Apr6g0869 1009 Gene3D Transferase(Phosphotransferase) domain 1 770 986 - -
Apr6g0869 1009 SUPERFAMILY Protein kinase-like (PK-like) 684 972 IPR011009 -
Apr6g0869 1009 ProSiteProfiles Protein kinase domain profile. 691 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0869 1009 CDD STKc_IRAK 697 975 - -
Apr6g0869 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Apr6g0869 1009 SUPERFAMILY L domain-like 43 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0869 Apr-Chr6 13187023 13190913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0869 30 996 Receptor kinase-like Gene Family AT5G25930 50.872 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr6g0869 Pkinase 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0869 - - gmx:100813894 1592.79