Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0865 ATGAGCTTGGTCTTTAACATAAGCTTTTGTTATGTGATTTTGTTGTTTGTGTCATTAAACATGGTCTTGTGTATTGAAATTGAGGAGTTCTATCCACAAGAAAGAGATGCTTTGATGCTCATAAGGGATTCTTTAAATTCTTCTGTCAATTTGCATGGGAATTGGACAGGCCCTCCTTGTATAGACAATCAAAGTAGATGGCTTGGTATCACATGTTCCAATTGGCATGTTGTTCAAATTGTTCTTGTAGAAGTTAACCTTAGTGGCTATTTACCTCTTACTTTCCTTCAAAACATAACTTTCTTGAACCAGCTTGACTTGAGAAGCAATGAACTTTTTGGTCCACTGCCAAGTCTTAAGAATTTGATGTTTTTGCAACAAGCCTTACTCTCTTTTAATCATTTCTCAGGGTCAATTCCTGTGGAGTATGTTGAATTGCCTAGTGTACAAGTTTTGGAGCTGCAAGAAAATTACTTAGATGGTCAAATTCCACCCTTTGATCAACCATCATTGTCAAGTTTCAATGTGTCATATAATCATCTTTCAGGAAAGATTCCTGAAACTTCTGTGCTCCAAAGGTTCCCTGAGAGTTCATTTGACAATAATTCAGATCTTTGTGGAAAGCCATTGGATAAGTTGTGTCCAGTTGAACCTCCTGCTCCTGCTCCAGCCCCATTTCCAGCACCACCTCCTGGTGTTATTCCACCTAGCCCAGCAGTGAAAAAACATAAGAAGCTTCAAGTGTGGATTATTGCTTTGATTAGTGTAGCAGCTGCAGTGGTTCTTCTTTCTTTGATCATTATTGCTTTCTTGTTTCCTAAAAGACGAGCAAGTGAAAAAGAAGCAACAAGAAATGATTCAGCAAATTATGTTTTTGGGGCATGGGCAAAAAGGATGGCAGCGAACAGTGATGTTTCTGAAAGATTAGGCCAATTGGAATTTTCCAACAAGAAATTGCCAGTTTTTGACTTGGATGACTTATTAAGGGCATCAGCAGAAGTGCTAGGAAGAGGGAATTTGGGTATTACATACAAGGCAACACTTGAATCTGGAACTGTTGTTGCAGTAAAGAGACTGAGCCACATGAATGAAGTGAGCAAGAAAGAATTTCTCCACCAGATGCAATTGCTAGGACAGATGAAGCATGAACATCTTGTAGAAATTATCTCCTTTTATTATTCAGAGGAACAAAAGTTGGTCATATATGAACTTATCTCTGATGGAACTTTGTTTGAACTCCTACATGAGGGTAGAGGAATGGGAAGAATACCTCTTGATTGGACCACAAGACTAACCATTATCAAAGACATTGCAAAGGGTCTTGCTTTTCTTCATCATTCTTTGCCTTCTCACAAGGTCCCTCATGCCAACCTCAAATCATCCAATGTCCTAATCCATCAAGATAGCAAAGGTTATCATTCCAAGCTCACAGACTATGGCTTTTTACCTCTACTCCCAATTAGAAAGAATGCAGAAAAGTTAGCCATAAAAAGGTCACCAGAATTTGTTAAAGGGAAGAAGCTAACAAACAAAGCTGATGTCTATTGCTTTGGTATCATTATGCTAGAGATAATAACTGGCAAAATTCCTGGTCAGATCATTGGTGAAATTGAAGAAACAACCAATAATGATCTTTCAGATTGGGTAAGAACAGTGGTGAACAATGATTGGTCCACAGATATATTGGATTTAGAAATACTAGCAGAAAGAGAAGGACATGATGCAATGTTGAAGCTAACAGAGTTGGCTCTGGAGTGTACAGATATGACACCAGAGAAACGGCCTAAAATGAGTCTAGTTTTGATGAGAATAGAAGAGATAGAGCAAATGAAAAAAGAGAATGACTGA 1848 0.382 MSLVFNISFCYVILLFVSLNMVLCIEIEEFYPQERDALMLIRDSLNSSVNLHGNWTGPPCIDNQSRWLGITCSNWHVVQIVLVEVNLSGYLPLTFLQNITFLNQLDLRSNELFGPLPSLKNLMFLQQALLSFNHFSGSIPVEYVELPSVQVLELQENYLDGQIPPFDQPSLSSFNVSYNHLSGKIPETSVLQRFPESSFDNNSDLCGKPLDKLCPVEPPAPAPAPFPAPPPGVIPPSPAVKKHKKLQVWIIALISVAAAVVLLSLIIIAFLFPKRRASEKEATRNDSANYVFGAWAKRMAANSDVSERLGQLEFSNKKLPVFDLDDLLRASAEVLGRGNLGITYKATLESGTVVAVKRLSHMNEVSKKEFLHQMQLLGQMKHEHLVEIISFYYSEEQKLVIYELISDGTLFELLHEGRGMGRIPLDWTTRLTIIKDIAKGLAFLHHSLPSHKVPHANLKSSNVLIHQDSKGYHSKLTDYGFLPLLPIRKNAEKLAIKRSPEFVKGKKLTNKADVYCFGIIMLEIITGKIPGQIIGEIEETTNNDLSDWVRTVVNNDWSTDILDLEILAEREGHDAMLKLTELALECTDMTPEKRPKMSLVLMRIEEIEQMKKEND* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0865 615 SUPERFAMILY L domain-like 31 194 - -
Apr6g0865 615 Gene3D Phosphorylase Kinase; domain 1 295 404 - -
Apr6g0865 615 Pfam Protein kinase domain 332 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0865 615 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 12 610 - -
Apr6g0865 615 ProSiteProfiles Protein kinase domain profile. 329 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0865 615 SUPERFAMILY Protein kinase-like (PK-like) 333 604 IPR011009 -
Apr6g0865 615 Gene3D Ribonuclease Inhibitor 31 216 IPR032675 -
Apr6g0865 615 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Apr6g0865 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 610 - -
Apr6g0865 615 Gene3D Transferase(Phosphotransferase) domain 1 405 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0865 Apr-Chr6 13150514 13152640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0865 54 613 Receptor kinase-like Gene Family AT1G68400 34.634 1.10e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr6g0865 Pkinase 1.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0865 - - gmx:102668068 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0865 6 13150514 13152640 Apr6g0865 6 13150514 13152640 ECH