Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0858 ATGAGAAACACTGAAGCAACACATGAAGCTATGGAGATAGAAGCAAGTAGGCCTTCAGGAAATGGAGCAGCACTTCCAGGGCTGAGTCCTTTGAGTGAGACCCTATGGAGAGAGAAAGCTAACACAGATATCATTGGAGATGTCTCAGCAAGACTCACATGGAAGGATCTAACTGTGATGGTTACTCTTAGCAATGGTGAGACACAAAATGTTTTGGAGGGTTTAACTGGTTATGCTGAACCTGGAACCTTCACTGCTCTCATGGGACCTTCAGGTTCAGGAAAATCTACTCTTCTTGATGCTCTCTCTAGTCGTCTTGCTGCAAATGCTTTCCTCTCAGGAACCATCCTCCTCAATGGTCGAAAAGCCAAGCTCTCTTTTGGCACTGCTGCTTATGTGACACAAGATGACAACTTGATTGGTACCTTAACAGTACGAGAAACAATCTCATACTCAGCTCGTTTGCGTTTGCCGGATAAGATGCCATGGTCAGATAAGAGAGCTTTGGTTGAGAGTACCATTGTGGCAATGGGTCTTCAAGACTGTGCTGACACAGTGATTGGAAATTGGCACTTGCGTGGGATCAGTGGTGGAGAGAAGAGAAGGGTTAGCATTGCCTTGGAAATCTTGATGAGGCCTAGATTACTTTTCCTTGATGAGCCAACTAGTGGACTTGACAGTGCTTCAGCTTTCTTTGTGACTCAGACGCTACGTGCCTTGGCAAGGGATGGAAGAACAGTGATAGCTTCCATTCATCAACCAAGTAGTGAAGTGTTTGAACTATTTGATCAATTGTACTTGCTTTCTGGGGGCAAAACTGTTTATTTTGGCCAAGCTTCGGAAGCATATGAGTTCTTTGCACAAGCTGGCTTTCCGTGCCCTGCTTTGAGGAACCCTTCTGATCATTTCCTTAGGTGCATCAATTCTGACTTTGACAAAGTCAAAGCCACTCTTAAAGGGTCCATGAAACTCAGGTTTGAGGGAAGTGAGGATCCACTGGACAGGATCACTACTGCTGAAGCAATCAGAACTCTTATTGATTACTACCGCACTTCTCAGCACTCTTATGCTGCAAGACAAAAAGTGGATGAGATATCCAAAGTTAAGGGAACAGTTCTTGAAGCAGGAGGAAGTGAGGCCAGTTTCTTGATGCAGTCTTACACCTTAACCAAACGTTCATTCATCAACATGTCAAGGGACTTTGGATACTACTGGCTTAGGCTTGTTATCTACATTGTAGTCACTGTTTGCATTGGATCCATTTATTTGAACGTGGGCACAGGCTACAACTCAATTCTGGCTAGGGGTTCATGTGCATCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGGGAGAGGCTTAATGGCCACTATGGTGTCACTGCATTTGTCATAAGCAACACTTTATCTGCAATGCCCTTCTTGATATTAATCACTTTCCTCTCTGGCACAATTTGTTACTTCATGGTTCGCCTACACCCTGGATTTTGGCATTACTTGTTCTTTGTGTTGTGCCTTTATGCCAGTGTCACAGTTGTTGAAAGCTTAATGATGGCAATTGCTAGCATTGTCCCCAACTTCCTCATGGGTATCATTATTGGAGCAGGGATTCAGGGCATATTCATGTTGGTCTCTGGCTACTTTAGGCTCCCACATGATATACCAAAGCCAGTCTGGCGCTACCCAATGTCATACATCAGTTTCCACTTCTGGGCATTACAGGGTCAGTACCAAAATGATTTGAGGGGCTTGGTATTTGACAATCAGACACCAGATCTTCCAAGGATTCCAGGTGAGTACATCTTGGAAAAAGTGTTCCAAATTGATGTCAACAGATCCAAGTGGATAGATTTGAGTGTGATTTTCAGTATGATTGTCATCTACCGCATTATTTTCTTCATCATGATCAAAATCAATGAGGATGTTACACCATGGGTAAGAGGGTACATTGCTAGGAGAAGAATGCAGCAAAAGAGTGGAACTCAGAATACAACAATTGCACCTGATGTTCTCACTCAATCACCATCTCTCAGAACCTATGTTGCCAATCAAACAAAATGA 2106 0.4335 MRNTEATHEAMEIEASRPSGNGAALPGLSPLSETLWREKANTDIIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSEDPLDRITTAEAIRTLIDYYRTSQHSYAARQKVDEISKVKGTVLEAGGSEASFLMQSYTLTKRSFINMSRDFGYYWLRLVIYIVVTVCIGSIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLRGLVFDNQTPDLPRIPGEYILEKVFQIDVNRSKWIDLSVIFSMIVIYRIIFFIMIKINEDVTPWVRGYIARRRMQQKSGTQNTTIAPDVLTQSPSLRTYVANQTK* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0858 701 MobiDBLite consensus disorder prediction 1 24 - -
Apr6g0858 701 CDD ABCG_EPDR 49 277 - -
Apr6g0858 701 Gene3D - 46 290 IPR027417 -
Apr6g0858 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 295 IPR003439 GO:0005524
Apr6g0858 701 PANTHER OS04G0528300 PROTEIN 3 698 - -
Apr6g0858 701 Pfam ABC transporter 74 223 IPR003439 GO:0005524
Apr6g0858 701 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524
Apr6g0858 701 Pfam ABC-2 type transporter 385 591 IPR013525 GO:0016020|GO:0140359
Apr6g0858 701 Pfam ABC-2 type transporter 252 309 IPR043926 GO:0140359
Apr6g0858 701 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 3 698 - -
Apr6g0858 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 289 IPR027417 -
Apr6g0858 701 SMART AAA_5 81 252 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0858 Apr-Chr6 13069013 13075047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0858 82 283 Calmodulin-binding Proteins AT2G36910 31.925 1.31e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0858 K05681 - gmx:100803731 1319.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0858 6 13069013 13075047 Apr6g0858 6 13069013 13075047 ECH