Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0834 ATGCTGTACAAACCATCTTTCAAGTCTTTGAAGATTGTCATGGCTAATTTGCTGATAATGCTTTTTGTGATGGAAATGGTAGTGAGTGGTTTCAGTTCTGGAGCAGGTGCTTTGAAAATGAATTACTACTTCTTAAGCTGCCCTATTGCTGAACCTGTTGTTCAGAACATAGTCAACAGAGCTCTACAGGATGATCCCACCCTAGCTGCAGCTCTTGTTAGAATGCACTTCCATGACTGTTTTATAGAGGGATGTGATGGGTCAATCTTGATTGACTCCACTAAGGGCAACACAGCAGAAAAGGATTCACCTGCAAATTTGAGCTTGAGAGGCTACGAAGTCATAGATGACATCAAAGAAGAGCTAGAAAGACAATGCCCTGGAGTGGTTTCATGCGCTGATATTCTTGCTATGGCTGCTAGAGATGCAGTTTTCTTTGCAGGAGGTCCAGTGTATGACATACCAAAAGGAAGGAAGGATGGAGCAAGGTCAAAAATTGAGGACACTATCAATCTACCAGCCCCTATCTTCAATGCTTCTGAGCTCATCAAGATGTTTGGGCAACATGGGTTTTCTGCAAGAGAGATGGTGGCTCTCTCTGGAGCTCACACACTAGGAGTGGCAAGGTGTTCTTCTTTCAAGAACAGATTGACCCAAGTGGATCGAACATTGGACTCAGAATTTGCAAAGACACTCTCCAAAACATGCAGCACTGGTGACAATGCTGAGCAACCCTTTGACGCCACAAGAAACGATTTTGATAACTTATACTACAACGCTTTGGTCTCAAACAACGGGGTCCTTACATCAGATCAAACATTGTACAATAGTCCACAAACAAAGAACATTGTGAATTCCTATGCAATGAACCAAGCCTTGTTTTTCTTAGATTTCCAACAAGCCATGGTGAAGATGAGCATGCTCGATGTCAAAGAGGGTTCCAAAGGGCAAGTACGAAAAAATTGCCATAAAATAAACTGA 981 0.4251 MLYKPSFKSLKIVMANLLIMLFVMEMVVSGFSSGAGALKMNYYFLSCPIAEPVVQNIVNRALQDDPTLAAALVRMHFHDCFIEGCDGSILIDSTKGNTAEKDSPANLSLRGYEVIDDIKEELERQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGARSKIEDTINLPAPIFNASELIKMFGQHGFSAREMVALSGAHTLGVARCSSFKNRLTQVDRTLDSEFAKTLSKTCSTGDNAEQPFDATRNDFDNLYYNALVSNNGVLTSDQTLYNSPQTKNIVNSYAMNQALFFLDFQQAMVKMSMLDVKEGSKGQVRKNCHKIN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0834 326 Pfam Peroxidase 54 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Apr6g0834 326 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 SUPERFAMILY Heme-dependent peroxidases 38 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 Gene3D - 41 326 - -
Apr6g0834 326 PANTHER PEROXIDASE 25-RELATED 31 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 CDD secretory_peroxidase 38 325 IPR033905 GO:0004601|GO:0042744
Apr6g0834 326 ProSiteProfiles Plant heme peroxidase family profile. 37 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PANTHER PEROXIDASE 47 31 324 - -
Apr6g0834 326 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g0834 326 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
Apr6g0834 326 Gene3D Peroxidase, domain 2 173 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0834 Apr-Chr6 12801900 12805117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0834 11 326 Peroxidase AT4G33420 71.519 4.04e-169 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0834 K00430 - gmx:100809245 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0834 6 12801900 12805117 Apr8g1639 8 26515574 26518434 PCT