Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0831 ATGCCTGCCATGAAAAAGAATTCTGAGCAGACTCGTTTTGGATCTGTATTCAATAAGTTGGTGAAGGAGCTAGGAGAACCTGTTGACTTTGAACTTCCAGAATGGTTTAATAAATCAAAGCCAATGCAGTACACCTATATAAAACGCAATATATATCTCACTAAGAAGGTCAAGAGACGGTTTGCTGATGATGGCATATTCTGTTCCTGCTCTTCTTCCTCTGAATCTACTGACGTATGTGGTAGAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGTTCGTCAGGCTGTAAATGTGGGAGCTCCTGTCTTAACAAACCATTTCAAAATCGTCCTGTGAAGAAGATGAAATTGGTTAAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCTTGGGGAATTTGTAATTGAATATGTTGGAGAGGTCATTGATGACAAAACCTGTGAAGAAAGGCTTTGGAACATGAAACATCGTGGGGAAACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATAGATGCAACATATAAGGGAAACAAATCAAGATATATCAATCATAGTTGCTGCCCCAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACTCGTGACATACAAAAGGGCGAGCATCTGACTTATGATTACCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGTTGAGTGTAGGCGTAAGTTGGGTGTCCGGCCTACCAAGCCTAAAATGTCTTCTTCAGATGCTACATTAAAATTAGTTGCATATCAGGTTTATCAGAATGGAGGTCTACAAATTGGAACATCTCGTGTTGTTGACCAATCAAAGTGCTTACACAATTGCATTGGTGAAGTTATTAGGATAAACCAATTTGGCAATGTGAGGTTTGGGATTATTAAACGATTTGATAAATATTCCCGAAAGCACTGGATCATGTTTGAGGATGGTTGTGTTGAAATATATGACATGTCAAAAGAGGACTGGGAACCTGTGAGATAG 1050 0.3943 MPAMKKNSEQTRFGSVFNKLVKELGEPVDFELPEWFNKSKPMQYTYIKRNIYLTKKVKRRFADDGIFCSCSSSSESTDVCGRDCHCGMLLSSCSSGCKCGSSCLNKPFQNRPVKKMKLVKTEKCGSGIVADEDIKLGEFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIQKGEHLTYDYQFVQFGADQDCHCGAVECRRKLGVRPTKPKMSSSDATLKLVAYQVYQNGGLQIGTSRVVDQSKCLHNCIGEVIRINQFGNVRFGIIKRFDKYSRKHWIMFEDGCVEIYDMSKEDWEPVR* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0831 349 ProSiteProfiles AWS domain profile. 63 112 IPR006560 GO:0005634|GO:0018024
Apr6g0831 349 ProSiteProfiles Post-SET domain profile. 237 253 IPR003616 -
Apr6g0831 349 SMART PostSET_3 237 253 IPR003616 -
Apr6g0831 349 SMART shorttest3 63 113 IPR006560 GO:0005634|GO:0018024
Apr6g0831 349 SMART set_7 114 237 IPR001214 GO:0005515
Apr6g0831 349 Pfam SET domain 125 230 IPR001214 GO:0005515
Apr6g0831 349 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 275 - -
Apr6g0831 349 Gene3D SET domain 32 270 IPR046341 -
Apr6g0831 349 ProSiteProfiles SET domain profile. 114 231 IPR001214 GO:0005515
Apr6g0831 349 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 292 IPR025787 -
Apr6g0831 349 CDD SET_ASHR3-like 115 253 - -
Apr6g0831 349 PANTHER SET DOMAIN PROTEINS 1 275 - -
Apr6g0831 349 SUPERFAMILY SET domain 26 243 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0831 Apr-Chr6 12774346 12786044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0831 87 252 C2H2 Transcription Factor Family AT2G23740 34.946 2.35e-23 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr6g0831 SET 2.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0831 - - gmx:100808183 653.284