Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0822 ATGGAGTGCAATAAAGATGAGGCCACCAGGGCTAGAGAAATCGCTGAGAGGAAGTTTGCTGCGAAGGATACTTCGGGTGCAAAGAAGTTTGCTTTGAAGGCCCAAAATTTATTTCCTGCTCTTGAGGGTATTTCTCAAATGGTAGCAACTCTTGATGTGTATATTTCTGCAGAGAATAAAATAAATGGAGAAGCAGATTGGTATGGAGTACTTGGTGTGAACCCCCTTGCTGATGATGATACTGTCAGGAAACAGTACAGGAAGCTAGCTCTCATACTTCACCCTGATAAGAACAAGTCCATAGGAGCTGATGGGGCCTTTAAACTCATTTCAGAGGCATGGAGTTTACTATCAGATAAGGCTAAAAGGGCAGCTTATGACGAGAAGAGAAAAGCAAAAGCACGGAAAGTTTCTACTAAGTTTGGAGGTTCAACTAAGTTTGGAGGTTCATCAACACAAACAGGGGTTAATGGTGGTTACAATTTTACTAAGACTACCCCTTCAAGTGCAGGTACTCAGAAGAATGCTGCTAAAGAGCACACTTCATCTTCTGTCTACAAGTCAAAATCAAATACATTTTGGACTGTTTGCCATCGATGCAAAATGCAGTATGAGTATCTCAGAGTTTATCTTAACCTTAAACTCTTATGTCCCAATTGCCATGAAGCATTTTTGGCTGTAGAAACTGCCCCTCCACCTGCAAGTGGTATTAGACCTGCAACTTCATGGAGTTTTTCACAGAATCAGCAAAATTTCAATCGCCAAGTACCTAGTAAAAGCAAATCTAGTGCTGGAAAGAATAACATGGCAGCTCCAAATGTTGGAGCAGGGTCTTATACTAAAACAGACTCCTATAACAAAGGCAGTTTCCAGTGGGCTCCATTCTCAAAAACTTCTGGTGTTTCTAATGTGGCTCAAGCTGCAAGTGTGGTTCAGCAGGCATACGATAAGGTGAAGCGAGATCGTGAGGAGGCACAAGCAGCTAGCAAAAGGGAAGAAGCCTTAAAAAGGAAGCAGCACGTTTCTAAAAAACGTCACTTTAATCATGCAAAGAGAAAAAGAGGGGGAGTGGAGGAAACTGTAAATCGAATGGGTGTGGGAAATGGAGCAGTGGGAACATCAAACTCATCCAGATCTAAACAGGGTAATTTTGTTCATAATAGGGTCAGTGGAATCAATAAGACCAGCAGCGTAAGAGAGGTCTCCCCGGTGGAACTCCAGAATCTTCTTATGGAGAAAGCTAGAAAAGAAATTAGCAATAAACTCAGGGAAATTCCGTCAAATACTGTTGTTAAAACAGTGGTGAGAGAGAGTGGAAATGGCTTTCAAAAAGCTAATGAGAATGGAGAAAAATCAAGAAACTCTGAGATGTGTGTTCAAATTAACATTGAGAAGTCAGAAGATAAAAAGAGCAGATCCCAAGCCGTTAAGTCTTCTGCAGGTTCTACTACTGCTAAAATTGGTCGAAAAATTTTGGAAACAGTGCCTGTAGATGTCCCAGATCCTGATTTCCATGATTTTTACAAGGACCGAACTGAAAGGTCTTTTGGGGAAAATCAAGTATGGGCTGCATATGATGATGATGATGGGATGCCTCGATGTTATGCAATGATTCACAATGTCAGCTCCTTGAATCCGTTCAAGATGCAGATCAGTTGGCTCAATCCAAATACCAACAGTGAACTGGCCCCTCTAAATTGGGTTGCTTCAGGCTTTTCAAAAACTTGTGGGGACTTCAGTATAGGCAGACGTGAAATCTATGGCTCCACCAATTTTTTCTCTCACAAGGTTAAGTGGAGAAAAGGTAACGATGGAACCATTTGTATATATCCTAGGAAAGGGGATGTTTGGGCCATCTATAGGAATTGGTCTCCTGACTGGAATGAGCTAACAGCAGATGAGGTTATACACAAGTTCGACGTGGTTGAAGTACTTGAGGACTTTATTGAAGGACATGGTATAAATGTTATCCCTTTGGTCAAAGTGGCTGGATTCAGGACAGTATTTCACCACCACTTTGATCCAAAAGAAATCAAGATCATTCCGAGGGAAGAGATGTTTCGGTTCTCTCACCAAGTACCTTCACATGTACTTACTGGTCAAGAAGCACCAAATGCTCCAAAGGGTTGCAGGGTGCTGGATCCAGCTGCTACTCCATTTGAACTTCTCCAGGTAATAGAAGTTGTGAAGGAGGAAGACATGACAGATAATGCGGGTAGTGATATAAAAGAAACAAGTGATAACATAGAAAAAGCTAATAGTGAGGAAATGATCAGTGGTGTGGAAAAGGTGGGGGAAGAGGAGGTTAAAAACAAAGATATGCAGGAAATAGAAACTTGGAAAGAGGGCAAAGAGAAAGGTGTGCAGGAAATAGAAACTTTGAAAGAGGACAAAGAGAAAGAAGTTATGCAGTAG 2415 0.4153 MECNKDEATRAREIAERKFAAKDTSGAKKFALKAQNLFPALEGISQMVATLDVYISAENKINGEADWYGVLGVNPLADDDTVRKQYRKLALILHPDKNKSIGADGAFKLISEAWSLLSDKAKRAAYDEKRKAKARKVSTKFGGSTKFGGSSTQTGVNGGYNFTKTTPSSAGTQKNAAKEHTSSSVYKSKSNTFWTVCHRCKMQYEYLRVYLNLKLLCPNCHEAFLAVETAPPPASGIRPATSWSFSQNQQNFNRQVPSKSKSSAGKNNMAAPNVGAGSYTKTDSYNKGSFQWAPFSKTSGVSNVAQAASVVQQAYDKVKRDREEAQAASKREEALKRKQHVSKKRHFNHAKRKRGGVEETVNRMGVGNGAVGTSNSSRSKQGNFVHNRVSGINKTSSVREVSPVELQNLLMEKARKEISNKLREIPSNTVVKTVVRESGNGFQKANENGEKSRNSEMCVQINIEKSEDKKSRSQAVKSSAGSTTAKIGRKILETVPVDVPDPDFHDFYKDRTERSFGENQVWAAYDDDDGMPRCYAMIHNVSSLNPFKMQISWLNPNTNSELAPLNWVASGFSKTCGDFSIGRREIYGSTNFFSHKVKWRKGNDGTICIYPRKGDVWAIYRNWSPDWNELTADEVIHKFDVVEVLEDFIEGHGINVIPLVKVAGFRTVFHHHFDPKEIKIIPREEMFRFSHQVPSHVLTGQEAPNAPKGCRVLDPAATPFELLQVIEVVKEEDMTDNAGSDIKETSDNIEKANSEEMISGVEKVGEEEVKNKDMQEIETWKEGKEKGVQEIETLKEDKEKEVMQ* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0822 804 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Apr6g0822 804 PRINTS DnaJ domain signature 68 86 IPR001623 -
Apr6g0822 804 PRINTS DnaJ domain signature 86 101 IPR001623 -
Apr6g0822 804 PRINTS DnaJ domain signature 102 122 IPR001623 -
Apr6g0822 804 PANTHER BNAC03G44070D PROTEIN 1 724 - -
Apr6g0822 804 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Apr6g0822 804 MobiDBLite consensus disorder prediction 750 804 - -
Apr6g0822 804 PANTHER BNAA04G14940D PROTEIN 1 724 - -
Apr6g0822 804 MobiDBLite consensus disorder prediction 321 356 - -
Apr6g0822 804 Pfam DnaJ domain 66 127 IPR001623 -
Apr6g0822 804 Pfam Domain of unknown function (DUF3444) 497 702 IPR024593 -
Apr6g0822 804 MobiDBLite consensus disorder prediction 254 277 - -
Apr6g0822 804 MobiDBLite consensus disorder prediction 364 383 - -
Apr6g0822 804 CDD DnaJ 66 119 IPR001623 -
Apr6g0822 804 MobiDBLite consensus disorder prediction 321 336 - -
Apr6g0822 804 Gene3D DnaJ domain 63 184 IPR036869 -
Apr6g0822 804 MobiDBLite consensus disorder prediction 464 483 - -
Apr6g0822 804 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Apr6g0822 804 SMART dnaj_3 65 122 IPR001623 -
Apr6g0822 804 Coils Coil 311 338 - -
Apr6g0822 804 MobiDBLite consensus disorder prediction 337 351 - -
Apr6g0822 804 MobiDBLite consensus disorder prediction 367 383 - -
Apr6g0822 804 MobiDBLite consensus disorder prediction 158 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0822 Apr-Chr6 12706882 12713011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0822 4 236 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.365 1.86e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0822 - - gmx:100816712 1206.82