Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0815 ATGTGTTGTTCAGTGTTGCTTCTTCATATCTTTTCACTCCTAGTTTTGCTCTTTAACATAACATGTGTATGTGGAAATGCTGAGCTTAGAGCTTTGATGGACTTGAAAGCCACTTTGGATCCTCAAGGCCATTTTTTGTCTTCATGGACTATGAATGGTAACCCATGTGGTGGTTTCTTTGATGGAGTGGCTTGCAATGAAAAGGGTCAGGTTGCAAATGTTTCTTTGCAAGGAAAAGGGCTTTCTGGGAGGCTATCACCAGCCATTGCTGAGCTGAAGCACTTGACAGGACTATACTTGCATTACAACTCTTTGTATGGAGAGATTCCAAGAGAAATTGCAAACTTGACTGAGCTTATTGATTTGTATTTGAATGTGAATCATTTGTCTGGTGAAATCCCTCCTGAGATTGGCAAGATGGAGAACCTGCAAGTTTTGCAGCTTTGTTATAATCAGCTAACAGGAAGCATACCTACGCAGCTTGGCGGTTTGAAAAAGCTTAGTGTTCTTGCTCTTCAGTCAAACCAATTATCTGGAGCTATCCCTGCTAGTTTAGGTGGTTTGGGAACTTTGATGAGGCTAGATTTGAGCTCAAATTATCTCTTTGGTTCCATTCCCTCTAGATTAGCTGATGTTCCTACACTGCAAGTTCTGGATGTTCATAACAACACTCTCTCTGGGAATGTGCCTCCAGCTTTAAAGAGACTAGAGGATGGATTTGTGTTTGAACACAACTTGGGGTTATGTGGAGTTGGGTTTTCGTCCTTGAAAGCGTGCACAGCTTCTGATCATGTCAATCTCACCAGACCTGAACCTTATGGAGCAGGAGTTGGTGGTCTGTCTAGGGATATCCCAGAAACTGCAAATGTAAAGTTGCCTTGCAATACAACTCAGTGCCGAAATTCATCGAAATCAAAACAAGCAACATCTATTAAAGTTGGCATTGTTCTTGTTACACTTGCATTATCAGCAGTTGGTATTCTGACTTTCACAATGTATCGTCGACGGAAACAAAGGCTTGGAAGTGCGTTTGACATCTCCGAAGGGCGTCGAAGTACAGATCAAGCCAAGGGTATATACAGGAAAAATGGATCTCCTTTGGTCAGCCTTGAGTATTCTAACGGATGGGACCCTTTGGCTGATAGCAGGAATTTCAATGGAGATAAGCAAGATATGTTCCAGAGTTTCAGGTTCAATTTGGAAGAAGTGGAATCTGCTACTCAGTATTTCTCTGAGTTGAACTTGTTGGGTAAGAGCAACTTCAGTGCAACTTACAAAGGAGTTTTAAGAGACGGGTCCATGGTTGCGGTTAAGAGCATAAGTAAAACTAGTTGCAAATCAGATGAAGCTGAGTTTTTGAAGGGATTGAACATTTTGACTTCGCTGAGGAATGAGAATTTAGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGTGAATGCTTCCTGATTTATGATTTTGTTTCCAATGGAAATCTGACGCGCTACCTTGATGTGAAGGAAGGTGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGAATTGCCAAAGGTATAGCTTATTTACATGCATACAAAGCAAACAAACCGGCTCTTGTTCATCAAAACATCTCAGCTGAGAAAGTGCTCATTGATCAGCGGCACAACCCGTTGCTTTCAGATTCCGGCCTGTACAAGCTTCTCACCAATGATATCGTCTTCTCTGCACTAAAGGGTAGTGCAGCAAAGGGTTACCTGGCTCCAGAATACACCACCACCGGCCGCTTCACTGAGAAAAGTGATGTTTATGTATTCGGGGTGCTTGTTTTCCAGATCCTCACAGGGAAGCAGAAGATCTCAAGTGCAATGCGTGTTGCTGCAGAGTCCTTCAGATTCCAAGACTTCATTGACCCTAATCTGCATGGCAGATTCTTTGAACATGAAGCGGCTAAACTAGCAAGAATGGCTTTACTTTGTTCCCATGAGTCTCCTTTTGAGAGACCAAGCATGGAAGCCATAGTTCAAGAACTAGGTAATTGTAGTAGCTGTCTCTGA 2049 0.4256 MCCSVLLLHIFSLLVLLFNITCVCGNAELRALMDLKATLDPQGHFLSSWTMNGNPCGGFFDGVACNEKGQVANVSLQGKGLSGRLSPAIAELKHLTGLYLHYNSLYGEIPREIANLTELIDLYLNVNHLSGEIPPEIGKMENLQVLQLCYNQLTGSIPTQLGGLKKLSVLALQSNQLSGAIPASLGGLGTLMRLDLSSNYLFGSIPSRLADVPTLQVLDVHNNTLSGNVPPALKRLEDGFVFEHNLGLCGVGFSSLKACTASDHVNLTRPEPYGAGVGGLSRDIPETANVKLPCNTTQCRNSSKSKQATSIKVGIVLVTLALSAVGILTFTMYRRRKQRLGSAFDISEGRRSTDQAKGIYRKNGSPLVSLEYSNGWDPLADSRNFNGDKQDMFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSMVAVKSISKTSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLIYDFVSNGNLTRYLDVKEGDGEVLEWSTRVSIVKGIAKGIAYLHAYKANKPALVHQNISAEKVLIDQRHNPLLSDSGLYKLLTNDIVFSALKGSAAKGYLAPEYTTTGRFTEKSDVYVFGVLVFQILTGKQKISSAMRVAAESFRFQDFIDPNLHGRFFEHEAAKLARMALLCSHESPFERPSMEAIVQELGNCSSCL* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0815 682 ProSiteProfiles Protein kinase domain profile. 410 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0815 682 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 680 - -
Apr6g0815 682 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Apr6g0815 682 Gene3D Ribonuclease Inhibitor 22 269 IPR032675 -
Apr6g0815 682 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 3 680 - -
Apr6g0815 682 Pfam Protein tyrosine and serine/threonine kinase 414 675 IPR001245 GO:0004672|GO:0006468
Apr6g0815 682 Gene3D Transferase(Phosphotransferase) domain 1 489 681 - -
Apr6g0815 682 Gene3D Phosphorylase Kinase; domain 1 380 488 - -
Apr6g0815 682 SUPERFAMILY L domain-like 22 235 - -
Apr6g0815 682 SUPERFAMILY Protein kinase-like (PK-like) 388 675 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0815 Apr-Chr6 12651778 12655368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0815 1 523 Miscellaneous Gene Families AT4G22730 54.953 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Apr6g0815 PK_Tyr_Ser-Thr 2.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0815 - - gmx:100789253 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0815 6 12651778 12655368 Apr8g1651 8 26690592 26695658 PCT