Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0807 ATGGAAGAAAGAGAGATTTTTAGTCCTGGGCATGCGGTTAAGGCTAACGAGGCCCCAGAGAGCTTCCACGTGGCTCTGAACTCCGTGCAGTTTTCCGGGCCCACGGCGGAGTCGCCGTTGCCGGCGCCGCCAACGGCACCGGTGAGTGCTGTGGCGGTGACTACCGGTAGTACGGAGGGAAAAAAGAAGAGGGGTAGGCCTAGGAAGTATGGACCGGATGGCAGGCTGGCACTGTCGCCGATGCCAATATCGGCGTCGATTCCGTTGACCGCAGATTTCTCAGGCTGGAAAAGGGGTAGAGGGAAGCCACTTGAATCAATCAAGAAGTCTTATAAGTTTTATGATTTTGAAGGTGCAGGACCAGGTGATGGAATTGCATACTCTGTTGGTGCCAATTTTACACCTCATGTGCTTACAGTAAATGCTGGCGAGGATGTTACTATGAAGATTATGTCTTTCTCCCAACAAGGATGTCGTGCGATTTGCATTCTCTCTGCAAATGGCACAATTTCAAATGTTACACTACGCCAACCAACTTCTTGTGGTGGTACTTTAACATATGAGGGGCGTTTTGAGATTCTTTCCTTGTCTGGTTCATTTATGCCAACTGAGAATGGGTTAACAAGGAGCAGATCTGGTGGAATGAGTGTCTCTTTGGTAGGTCCAGATGGTCGAGTAATGGGAGGTGGACTGGCTGGTTTGCTGGTAGCTGCTGGTCCTGTGCAGGTTGTTGTAGCAACTTTTCTACCAGGTCACCAGCTGGAGCAGAAACCCAAGAAGCAAAGGGTAGAGCATATATCAATGATTGCACCTACACACGTTAATCCTACAACTTCTACTGAAGAAATAAGATTCGGTCTCGGCAGCGTAAAGCCGATCATGACACCGGCTGCCTTTCAAATTGACAACATTGCTTCTTTTAACAATGGTCAAGGCTCTAGAAACTCACCTATTGATGATGATGCTCCTCCTTTGCCTGACAAGGAGCCTAATCCAAGCCACACAAATGCTGGAGTTGCATGCTAA 1026 0.4854 MEEREIFSPGHAVKANEAPESFHVALNSVQFSGPTAESPLPAPPTAPVSAVAVTTGSTEGKKKRGRPRKYGPDGRLALSPMPISASIPLTADFSGWKRGRGKPLESIKKSYKFYDFEGAGPGDGIAYSVGANFTPHVLTVNAGEDVTMKIMSFSQQGCRAICILSANGTISNVTLRQPTSCGGTLTYEGRFEILSLSGSFMPTENGLTRSRSGGMSVSLVGPDGRVMGGGLAGLLVAAGPVQVVVATFLPGHQLEQKPKKQRVEHISMIAPTHVNPTTSTEEIRFGLGSVKPIMTPAAFQIDNIASFNNGQGSRNSPIDDDAPPLPDKEPNPSHTNAGVAC* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0807 341 MobiDBLite consensus disorder prediction 306 341 - -
Apr6g0807 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 323 - -
Apr6g0807 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 258 - -
Apr6g0807 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 135 248 IPR005175 -
Apr6g0807 341 Gene3D - 135 268 - -
Apr6g0807 341 ProSiteProfiles PPC domain profile profile. 130 272 IPR005175 -
Apr6g0807 341 MobiDBLite consensus disorder prediction 32 77 - -
Apr6g0807 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 323 IPR039605 GO:0003680
Apr6g0807 341 CDD DUF296 134 248 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0807 Apr-Chr6 12564164 12570828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0807 47 309 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 53.795 2.06e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0807 - - gmx:102667678 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0807 6 12564164 12570828 Apr6g0807 6 12564164 12570828 ECH
Apr6g0807 6 12564164 12570828 Apr8g1657 8 26754780 26761866 PCT