Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0799 ATGGAACATGAACATGGTTTGGTGCTGTTGATCTTTGTTAGCAATCACAGAAGACACTCTCTGTTGTTTGTTGTGGCAATGCAACTGATGTTGCTTCTCTCTTCTTTTGCTTCACCCATTAGTGATGAAGGACAAGCATTGATGAAGATTAAGGCTTCTTTCAGCGATGTAGAAGATGTTCTGCATGATTGGGATAATGTGCACAATGATGACTACTGTTCTTGGCGTGGAGTCTCGTGTGATAATGTCAGCCTTACCGTGATTTCTCTGAATTTGTCAAGCTTGAACTTGGGCGGGGAGATATCACCGGCAATTGGTGACTTAGGAAACTTGCAATCCATAGACCTGCCGGGAAACAAACTAACTGGTCAAATTCCAGATGAAATTGGGAACTGTGCTGCACTTATTCATATGGATTTGTCTGATAATCAGCTATATGGTGATATACCTTTCTCCATATCAAAGCTAAAGCAGCTTGTGTTTCTGAATTTAAAGAGTAATCAGTTGACTGGTCCTGTCCCCTCGACTTTAACCCAAATTCCAAACTTGAAGACTCTTGATCTTGCCCGAAATAGACTCACCGGTGAGATTCCAAGACTACTCTATTGGAATGCAGTCTTGCAGTACCTTGGGTTGCGAGGGAATATGTTGAGCGGAACACTATCCCCTGATATCTGTCAGTTAACTGGTTTGTGGTATTTTGATGTGAGGGGCAATAATTTGACTGGTACAATACCTGACAGCATTGGAAACTGTACAAATTTTGAAATCTTGGATCTATCATATAATCAGATTTCTGGGGAGATCCCCTATAATATTGGATTTCTTCAAGTAGCTACTCTGTCACTTCAAGGAAATAAACTAACTGGGAGGATTCCGGAAGTCATTGGTTTAATGCAGGCTCTTGCCATTTTGGATTTGAGTGAGAATGAGCTGACAGGACCCATCCCTCCCATACTAGGAAATTTGTCTTTCACTGGCAAGCTGTACCTTCATGGAAACATGATTACTGGATCAATACCTCCAGAACTTGGCAATATGTCAAGACTAAGCTACCTGCAATTGCATAACAATCAACTAGTTGGAGAAGTTCCTGATGAACTTGGGAAGCTTGAACATTTGTTTGAATTGAATCTTGCCAATAATCATCTCGAAGGATATATTCCACATAACATAAGCTCCTGTACTGCCTTGAACAAGTTTAATGTGCATGGTAATCATTTAAGTGGTTCAATTCCTTTGAGCTTTCGCAGCCTTGAGAGTTTGACTTACTTAAATCTTTCTGCAAACAATTTCAAAGGGAGTATACCTGTTGAGCTGGGCCATATAATAAACCTTGATACGTTGGATCTATCTAGCAATAATTTTTCAGGGCATATTCCAGGGTCTGTTGGTTATCTTGAACATCTTCTGACCTTGAACTTGAGCGGTAATAATCTTCAGGGTCCCTTGCCTGCTGAATTTGGAAACCTAAAAAGCATACAAATAATTGATATGTCTTTCAACCGACTGTCGGGTAGCATCCCTCCGGAAATTGGTCAGCTGCAGAATCTTGTGTCTCTGATTTTGAACAACAATGATTTGCATGGGAAGATTCCAGATCAGCTTACCAATTGCTTAAGTCTTAACTCCCTGAATGTCTCTTACAATAACTTATCTGGAGTCATTCCACTTATGAGGAACTTCTCACGGTTTTCTGCCGACAGCTTCATTGGAAATCCATTATTATGTGGAAATTGGATAGGATCAATATGTGGTACTTACATGCCAAAATCCAGAGTGGTTTTTTCAAGGGCTGTGGTTGTTTGTCTCGTATTTGGTATCATCACAGTATTGGCCATGGTATCTATTGCTATCTACAGATCAAGCCAATCAAAGCAATTGCTTAAAGGGTCTAGAGGAACTGGGCAAGGCATGTTGAGTTTAAGACATACTTATATTTTTCATTGGCCACCCAAGCTTGTAATTCTTCATATGGGCCTGGCCATCCACACCTTTGATGATATTATGAGAGTTACTGAGAATCTTGATGAGAAATATATCATAGGGTATGGTGCCTCTAGTACCGTATACAAGTGTGTATTGAAGAATTCCCGACCAATTGCAATTAAACGACTGTACAACCAGCATCCACACAACTCAAGGGAGTTTGAGACAGAGCTTGAAACTGTTGGCAGCATCAGACATAGGAATCTTGTTACTTTACATGGTTATGCCCTAACTCCTTATGGAAATCTTCTTTTCTATGACTACATGGAGAATGGCTCTCTCTGGGATCTTCTTCATGGTCCCATGAAAAAGGTAAAACTTGATTGGGAGGCACGCTTGAGGATTGCTGTTGGAGCTGCTGAAGGACTTGCTTACCTCCATCATGACTGCAATCCTCGAATCATTCACAGGGACATAAAGTCCTCAAATATCCTGTTGGATGAGAACTTTGAAGCTCATCTCTCTGATTTTGGCATTGCCAAATGTTTATCAACAACAAAAACTCATGCATCAACATATGTTCTTGGAACAATAGGCTATATTGATCCTGAGTATGCCCGGACATCTAGGCTGAATGAAAAATCTGATGTATATAGCTTTGGCATTGTTCTACTCGAGCTACTAACTGGGAAGAAAGCGGTGGACAATGATTCTAACTTGCATCATTTGATTTTGTCTAAAGCCGATAGCAACACTGTAATGGAGACAGTGGATCCTGAAGTATCTGTTACCTGCATGGATCTGGCCCATGTTAAGAAAACCTTTCAGCTTGCATTGCTTTGCACAAAAACAAATCCTTCTGAGAGGCCTACCATGCATGAAGTTGCTAGGGTCTTGGGATCACTACTCCCTGCACCTCCCAGCAACATCTTTGCCCCTCCTACAAAGACCATTGATTATGCACAATTTGTGATACAAAAAAGAAACCACCTCCACCACCCACAAATGGATAGGCTACAACCTCCGCAGGAGAAGTACTCTAATGATCAATGGTTTGTTCACTTTGAGGATGTTGTGTCAAACAGCCTCTAA 3021 0.4095 MEHEHGLVLLIFVSNHRRHSLLFVVAMQLMLLLSSFASPISDEGQALMKIKASFSDVEDVLHDWDNVHNDDYCSWRGVSCDNVSLTVISLNLSSLNLGGEISPAIGDLGNLQSIDLPGNKLTGQIPDEIGNCAALIHMDLSDNQLYGDIPFSISKLKQLVFLNLKSNQLTGPVPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNAVLQYLGLRGNMLSGTLSPDICQLTGLWYFDVRGNNLTGTIPDSIGNCTNFEILDLSYNQISGEIPYNIGFLQVATLSLQGNKLTGRIPEVIGLMQALAILDLSENELTGPIPPILGNLSFTGKLYLHGNMITGSIPPELGNMSRLSYLQLHNNQLVGEVPDELGKLEHLFELNLANNHLEGYIPHNISSCTALNKFNVHGNHLSGSIPLSFRSLESLTYLNLSANNFKGSIPVELGHIINLDTLDLSSNNFSGHIPGSVGYLEHLLTLNLSGNNLQGPLPAEFGNLKSIQIIDMSFNRLSGSIPPEIGQLQNLVSLILNNNDLHGKIPDQLTNCLSLNSLNVSYNNLSGVIPLMRNFSRFSADSFIGNPLLCGNWIGSICGTYMPKSRVVFSRAVVVCLVFGIITVLAMVSIAIYRSSQSKQLLKGSRGTGQGMLSLRHTYIFHWPPKLVILHMGLAIHTFDDIMRVTENLDEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQHPHNSREFETELETVGSIRHRNLVTLHGYALTPYGNLLFYDYMENGSLWDLLHGPMKKVKLDWEARLRIAVGAAEGLAYLHHDCNPRIIHRDIKSSNILLDENFEAHLSDFGIAKCLSTTKTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHHLILSKADSNTVMETVDPEVSVTCMDLAHVKKTFQLALLCTKTNPSERPTMHEVARVLGSLLPAPPSNIFAPPTKTIDYAQFVIQKRNHLHHPQMDRLQPPQEKYSNDQWFVHFEDVVSNSL* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0799 1006 Gene3D Ribonuclease Inhibitor 40 205 IPR032675 -
Apr6g0799 1006 ProSiteProfiles Protein kinase domain profile. 676 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0799 1006 SUPERFAMILY L domain-like 324 578 - -
Apr6g0799 1006 SUPERFAMILY L domain-like 40 324 - -
Apr6g0799 1006 Pfam Leucine rich repeat 110 169 IPR001611 GO:0005515
Apr6g0799 1006 Pfam Leucine rich repeat 445 504 IPR001611 GO:0005515
Apr6g0799 1006 ProSiteProfiles Leucine-rich repeat profile. 182 204 IPR001611 GO:0005515
Apr6g0799 1006 SMART serkin_6 676 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0799 1006 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Apr6g0799 1006 Gene3D Phosphorylase Kinase; domain 1 652 751 - -
Apr6g0799 1006 Gene3D Ribonuclease Inhibitor 279 587 IPR032675 -
Apr6g0799 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 797 809 IPR008271 GO:0004672|GO:0006468
Apr6g0799 1006 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 31 977 - -
Apr6g0799 1006 Pfam Protein kinase domain 679 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0799 1006 SUPERFAMILY Protein kinase-like (PK-like) 657 942 IPR011009 -
Apr6g0799 1006 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 31 977 - -
Apr6g0799 1006 Pfam Leucine rich repeat N-terminal domain 41 81 IPR013210 -
Apr6g0799 1006 Pfam Leucine Rich repeat 181 196 IPR001611 GO:0005515
Apr6g0799 1006 Pfam Leucine Rich repeat 251 268 IPR001611 GO:0005515
Apr6g0799 1006 Gene3D Ribonuclease Inhibitor 206 278 IPR032675 -
Apr6g0799 1006 Gene3D Transferase(Phosphotransferase) domain 1 752 949 - -
Apr6g0799 1006 SMART LRR_typ_2 467 490 IPR003591 -
Apr6g0799 1006 SMART LRR_typ_2 228 252 IPR003591 -
Apr6g0799 1006 SMART LRR_typ_2 371 395 IPR003591 -
Apr6g0799 1006 SMART LRR_typ_2 419 443 IPR003591 -
Apr6g0799 1006 SMART LRR_typ_2 347 370 IPR003591 -
Apr6g0799 1006 SMART LRR_typ_2 180 204 IPR003591 -
Apr6g0799 1006 SMART LRR_typ_2 299 323 IPR003591 -
Apr6g0799 1006 SMART LRR_typ_2 156 179 IPR003591 -
Apr6g0799 1006 SMART LRR_typ_2 108 132 IPR003591 -
Apr6g0799 1006 SMART LRR_typ_2 515 539 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0799 Apr-Chr6 12461106 12468117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0799 276 557 Receptor kinase-like Gene Family AT5G07180 40.071 5.48e-46 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Apr6g0799 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0799 K20718 - gmx:100305433 1743.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0799 6 12461106 12468117 Apr6g0799 6 12461106 12468117 ECH