Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0792 ATGATAAAAAACGTTCTTCTTCTTCTTCTGTTTTGCTTTGCCTATGGAGTGACCCTTTCACTCTCAGAGTCCAAATATGCTTCTGTGCAACCTCACGCAGCTGAATCCTTCTCTGTTGGTTATATTCAGATGACAACCGCTGCGAACTGTTCGTACCTGGTAGTCATTACTACGAGTTGTTCATCACCTAAATTCACAACGGATAAGATTGGTATTGCGTTTGGAGATGCTTATGGCAACCAGGTGTATGAACCAAGACTAGATAATCCAATTGCAGGAACATTTGAGCAGTGTTCTTCAGATTCATTTCAGATAGATGGTGAATGTGCTTCTCCTATTTGTTTTGTGTACCTATATAGATCTGGTGCTGAATATGGTTGGAAGCCTGACAGTGTGAAAATCTATGGCTACGACTCAGAGCCTGTTACTTTTAATTTCAACGAGTCCATCCCTAATGGTACATGGTACGGCTATGATAATTGTGTTACTCCTCCGCCACCCCCTTCTTCCTCATACCAACTATCCCCTAAAAAATGGGTTATAATCAGTATGGTTATAGGCTTTGTTCTTAGTTTTTGGATGTAA 585 0.4068 MIKNVLLLLLFCFAYGVTLSLSESKYASVQPHAAESFSVGYIQMTTAANCSYLVVITTSCSSPKFTTDKIGIAFGDAYGNQVYEPRLDNPIAGTFEQCSSDSFQIDGECASPICFVYLYRSGAEYGWKPDSVKIYGYDSEPVTFNFNESIPNGTWYGYDNCVTPPPPPSSSYQLSPKKWVIISMVIGFVLSFWM* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0792 194 Pfam Embryo-specific protein 3, (ATS3) 43 161 IPR010417 -
Apr6g0792 194 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 49 158 IPR036392 GO:0005515
Apr6g0792 194 CDD PLAT 50 163 - -
Apr6g0792 194 Gene3D PLAT/LH2 domain 48 157 - -
Apr6g0792 194 PANTHER - 6 194 - -
Apr6g0792 194 PANTHER EMBRYO-SPECIFIC PROTEIN 6 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0792 Apr-Chr6 12383382 12384849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0792 - - gmx:100305526 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0792 6 12383382 12384849 Apr6g0792 6 12383382 12384849 ECH
Apr8g2297 8 33389796 33390899 Apr6g0792 6 12383382 12384849 PCT