Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0788 ATGGTCCTACAAACTTCATCCCTAGAGTTTACAGTGAGGAGGCACCCACCAGAGCTAATAGCCCCAGCTAACCATACCCCCCATGAAATTAAGCTTCTATCTGACATAGATGATCAACATGGCCTTCGTTGCCATGTTCAATTGGTACAATTTTATCGTTACCAACCTTTGATGGAAGGAAAAGACCCTGTTAAAGTCATCAGAGAAGCACTTGCCAAAACACTTGTGTTTTATTATCCACTTGCTGGTAGGCTTAGCGAAGGTCCTAATGGTAAACTAACGGTGGATTGTAATGGAGAAGGTGTCATGTTCATTGAGGCTGATGCAGATGTGACACTTGAACAGTTTGGTAACAATTTTATGCCCCCATTCCCCTGCTTCGATGAGCTTCTTTACAATTTTCCTGGCTCTGATGGAATGATTGACACTCCCCTCCTGGTCATGCAGGTAACTCGACTTAACTGTGGTGGTTTCATCTTTGCTTCAAGTATGAACCATACTATGCTGGATGGAATTGGAATGTCAAAGTTCCTACATGACGTAGGTGAAATAGCACGAGGTGCAACAAAACCTTCGATTCTTCCAGTGTGGCATAGGGAAGTTCTATGTGCAAGAAACCCACCAAGAATCACTTGCACTCATAATGAATACCAACAACTACCACCTGATTCAAGAAGCATCTTCACACCCCATCATCGTTCCTTCTTCTTTGGCCCCAAAGAGATAGCTTCAATGCGTTCTCTTCTCCCTCCACACCTTGCAACCAAATCAACCTCCTTTGAAATCCTCACTGCATATCTGTGGCGTTGCCGCACATTTGCATTGCAGTGGCAAAACCCTGATCAAGAGGTTCGCTTGTTGTGCATTGTGAATGCACGTTTTGGAAGTTGCATGTTCAACCCTCCTTTACCTAATGGTTATTATGGCAATGCTATTGTGTTTCCTGCGGCAGTTACCACTGTAGGGAAACTCTTGGGTAATCCATTAGGGTATGCATTGGAGCTAGTGAAGAAGGCAAAGGATGAAGCAAATGAAGAGTATGTGCACTCTGTGGCTGACCTAATGGCTATCAAAGGAAGACCTTGTTTTACTATGTTAGGCTCGTTTATGGTGTCAGATCTCTTAAAGACTAATGCTGATTTGAATTTTGGGTGGGGCAAGGGTTTGTATACTGGGGTGGCCAAAGGTGGTCTTGGTGACTTTCCTGGATTGAGCTTTTACGTTCCCTATATCAATTCCAAAGGAGAGCAAGGAAGAGTGGTTCCAATTTGCCTTCCAAAAGATGCTATAGAGAGGTTTGAGAAAGTGCTGGATGACACCCTCATTATCAAGAATGACACTGTTGTGTTAATGTCCAATATGTGA 1365 0.4359 MVLQTSSLEFTVRRHPPELIAPANHTPHEIKLLSDIDDQHGLRCHVQLVQFYRYQPLMEGKDPVKVIREALAKTLVFYYPLAGRLSEGPNGKLTVDCNGEGVMFIEADADVTLEQFGNNFMPPFPCFDELLYNFPGSDGMIDTPLLVMQVTRLNCGGFIFASSMNHTMLDGIGMSKFLHDVGEIARGATKPSILPVWHREVLCARNPPRITCTHNEYQQLPPDSRSIFTPHHRSFFFGPKEIASMRSLLPPHLATKSTSFEILTAYLWRCRTFALQWQNPDQEVRLLCIVNARFGSCMFNPPLPNGYYGNAIVFPAAVTTVGKLLGNPLGYALELVKKAKDEANEEYVHSVADLMAIKGRPCFTMLGSFMVSDLLKTNADLNFGWGKGLYTGVAKGGLGDFPGLSFYVPYINSKGEQGRVVPICLPKDAIERFEKVLDDTLIIKNDTVVLMSNM* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0788 454 Gene3D - 6 216 IPR023213 -
Apr6g0788 454 PANTHER ALCOHOL ACYLTRANSFERASE 10 443 - -
Apr6g0788 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 443 - -
Apr6g0788 454 Gene3D - 217 439 IPR023213 -
Apr6g0788 454 Pfam Transferase family 18 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0788 Apr-Chr6 12268795 12270497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0788 19 437 Monolignol Biosynthesis Gene Families AT5G48930 30.575 1.47e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0788 K19861 K13610 gmx:100795237 761.14