Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0787 ATGGTTTTCCAAACTTCATCTCTAGAGTTTACAGTGAGGAGGCACCCACCAGAGCTAGTAGCCCCAGCTAAACCTATTCCCCATGAAGTTAAGCTTCTATCTGACATAGATGACCAAAATGGCCTTCGTTACCAACTTCCATTGGTACAGTTCTATCCTTACCAACCTCTAATGAAAGGGAAAGATCCTGTTCAAGTTATTAGAGAAGCCCTTGCCAAAACACTTGTGTTTTATTATCCATTAGCTGGGAGGCTTAGGGAAGGTCCTAATGGTAAACTAATGGTGGATTGTAATGGAGAAGGTGTCATGTTCATTGAGGCTGATGCAGGTGTGACACTTGAACAGTTTGGTAACAATTTTATGCCACCGTTCCCTTGCTTCGATGAGCTTCTTTACAATGTTCCTGGCTCAGATGGAATGATTGACACTCCACTCCTGCTCTTACAGGTGACGCGCCTCAAGTGTGGTGGTTTCATCTTTGCTCTCCGCATGAACCATACCATGTGCGATGGAAGTGGAATTTGCCAATTCCTGAAGGCCTTAGCAGAAATAGCACGAGGTGCACCAAAACCTTCGATTCTCCCAGTGTGGCATAGGGAACTTCTGTGTGCAAGAAACCCACCAAGAATCACTTGCACTCATAATGAATACCAACAACTACCACCTGATTCGAGAAGCATCTTCACACCCCATCATCGTTCCTTCTTCTTTGGCCCAAAAGAGATAGGTTTAATGCGTTCTCTTCTCCCTCCACACCTTGCAACCAAATCAACCTCATTTGAAATCCTCACTGCATATCTGTGGCGTTGCCGCACATTTGCATTGCAGTGGCAAAACCCTGATCAAGAGGTTCGCTTGTTGTGCATTGTGAATGCACGTTTTGGAAGTTGCATGTTCGCCCCTCCTTTGCCTAATGGTTTTTATGGTAATGCTTTTGTGTTTCCTGCGGCAGTTACCACTGTAGGGAAACTCTTGGGTAGTCCATTAGGGTATGCATTGGAGCTAGTGAAGAAGGCAAAGGATGAAGCAAATGAAGAGTATGTGCACTCTGTGGTTGACCTAATGGCTATCAAAGGAAGACCTTGTTTTACTATGTTAGGCTCTTTCATGGTGTCAGATCTCTTAAAGAGTGGATTCACAGATTTTAACTTTGGGTGGGGTAAGGCTTTGTATTCTGGGGTAGCCAAAGGTGGTCTTGGGAACATTTCTGGGGTGAGCTTCTATGTTCCCTATACTAACTCCAAAGGGGAGAAAGGAAGAGTTGTTCCAATTTGCCTGCCACAAGATGCAATGGAGAGGTTTGAGAAAGAGTTGAATGACACACTGAAGATTAAGAATAACTATATGGTGTTAATGTCTAGTCTCTAA 1368 0.4415 MVFQTSSLEFTVRRHPPELVAPAKPIPHEVKLLSDIDDQNGLRYQLPLVQFYPYQPLMKGKDPVQVIREALAKTLVFYYPLAGRLREGPNGKLMVDCNGEGVMFIEADAGVTLEQFGNNFMPPFPCFDELLYNVPGSDGMIDTPLLLLQVTRLKCGGFIFALRMNHTMCDGSGICQFLKALAEIARGAPKPSILPVWHRELLCARNPPRITCTHNEYQQLPPDSRSIFTPHHRSFFFGPKEIGLMRSLLPPHLATKSTSFEILTAYLWRCRTFALQWQNPDQEVRLLCIVNARFGSCMFAPPLPNGFYGNAFVFPAAVTTVGKLLGSPLGYALELVKKAKDEANEEYVHSVVDLMAIKGRPCFTMLGSFMVSDLLKSGFTDFNFGWGKALYSGVAKGGLGNISGVSFYVPYTNSKGEKGRVVPICLPQDAMERFEKELNDTLKIKNNYMVLMSSL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0787 455 PANTHER ALCOHOL ACYLTRANSFERASE 10 444 - -
Apr6g0787 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
Apr6g0787 455 Pfam Transferase family 18 439 - -
Apr6g0787 455 Gene3D - 9 219 IPR023213 -
Apr6g0787 455 Gene3D - 231 445 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0787 Apr-Chr6 12262114 12264593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0787 43 438 Monolignol Biosynthesis Gene Families AT5G48930 30.900 1.18e-46 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0787 K19861 K13610 gmx:100795237 820.076