Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0784 ATGCCATCCCGACAACCTCAAACCGCCCCGTCAGCCATACCTCACCATCACCACCACCACCGCCTTCTCACTCCTCTCCTCGCCGCCGCCGCCGCAGCATGCTCCCTCCTGCTCCTCCTCCTAATCGTCCTCCTCCTCTGCCGCCGCAAGCGCCCCATCCTCGACTCCAAACCCCCCCACCGCCTCTCCTTCTCCCTCCTCCGCCGCGCCACCGGCTCTTTCTCCACCCGCCTCGGCCACGGCGGCTTCGGCCCCGTCTTCGCCGGCGCCGTTGCTGGCAACCCTGTCGCCGTGAAGCTCATGGACTCGGCCTCCCAGCAAGGGGAACGCGAGTTCCACAATGAACTCTTCTTCGCCTCGAGGCCCCTCCTCTGCCGCCACGTCATCACTGCCATAGCATTCTCCTCCGACCCCAAACGACGCCGTTTTCTTCTCGTCTACGACCTCATGCACAACGGCAACCTCCAAGACGCCCTCTTGCACCGCAAGTGTCCCCAACTCGCCAATTGGAACACGCGCTTCTCAATTATCTCTCACATAGCTCAGGGGCTTCTTTACCTTCACACTTGTGATCCCCCCATTATCCATGGTGACATCAAACCTAGTAATATTTTGCTTGATCGCGATTTTTTGGCAAAAGTTGGCGATTTTGGACTTGCCCGGTTGAAATCGGAGCCTCCCCGGTTTGAAATTGAGGTCCTTGATGATGGTGGTGGTGGTGGTGATGAGGAGAAGAAAAAAAAGGATGATTTGGAATTTGAGGGTGGTGGGGTTGTGAATGATGATTGTGTGTCTGTGGAGAGTGTGCATAGTGTTTTTCTTGAGGAGGGTAGCTTGGGAGTGGGGCAATCTCCTTCGCCGGAGACAGCGGCGATGGCGATGACTTCACCAGAGACGGGTTTGGCAGTGGCTGCGTCGCCGGGGAGTGAGAAGGATGTTGTTAAGAAGAATGGGAAAGGGTTGAAAAGTAATTCAGTGAAGGATTGGTGGTGGAAGCAGGAGAATGAGGTTGGGGAGAGTAAGAAGGTGAAGGATTATGTGATGGAGTGGATTGGAAGGGATGTGAATAAGGAAAGGGGGAATGAAGAAATTGGGAAGGGAGAGAAGAAGGAGAAGAAAATGAAGAAGAAGAGGAAGCAGGAATTGGAATGGTGGGAATCAATGGATGAGGAAAAGTTTGATGGGGTTTTGAAGAAGGAGAAGAGAAGGCCAGTGAGGGAATGGTGGAAGGAGGAGTGTTGTGAAGATGTTGCAAAGAGGAAGAAGAAGAAGAAAAAGAGAAAAGGAGTGAGTGTTAATGGTGATGATGACAATTGTGATGATTGGTGGGTGAGTGATGATGCAATGTATGGTGATAAGAGGAAGATGAAGAGCAGAAGTAGGAATAATAACCGTGGGAATATGGATTGGTGGTTAGAGGGGTTAAGCGGTGAGTTATGGAGAGCACGTAGGAATAGCTTTGATTCTGCTAGTGGTGAAATTCCAAAGAGTGGTGGTGTGAGTAGTACTCCTAGTATGAGGGGAACTGTCTGTTATGTTGCACCCGAGTATGGTTATGGTGGTGATGTCTCTGAGAAGTGTGATGTGTATAGCTTTGGTGTCCTGTTGCTTGTCATCATTTCTGGGAGGCGCCCACTTCAGGTGAATGGTTCGCCGATGTCTGAGTTTCATCGCGCGAATCTTCTTTCATGGGCACGCCATTGTGCCAGAAATGGGAAGCTCATTGAGCTGGTTGATCAGTCCATTGAGTCATTGGATGAGGAGCAGGCTCTTCTCTGCATCAAGGTGGCTTTGCTTTGTTTGCTTAAGTTGCCTGCTCGTCGTCCTTCGATGAAGGAGGTTGTAGGAATGCTTATTGGGGAGTTGGAGCCCCCCCAATTGCCTGTTGAGTACTCACCTTCAACCCCTTCTCGCTTTCCCTTCAAGTCTAGGAAAAAAGGCAGGTGA 1947 0.5162 MPSRQPQTAPSAIPHHHHHHRLLTPLLAAAAAACSLLLLLLIVLLLCRRKRPILDSKPPHRLSFSLLRRATGSFSTRLGHGGFGPVFAGAVAGNPVAVKLMDSASQQGEREFHNELFFASRPLLCRHVITAIAFSSDPKRRRFLLVYDLMHNGNLQDALLHRKCPQLANWNTRFSIISHIAQGLLYLHTCDPPIIHGDIKPSNILLDRDFLAKVGDFGLARLKSEPPRFEIEVLDDGGGGGDEEKKKKDDLEFEGGGVVNDDCVSVESVHSVFLEEGSLGVGQSPSPETAAMAMTSPETGLAVAASPGSEKDVVKKNGKGLKSNSVKDWWWKQENEVGESKKVKDYVMEWIGRDVNKERGNEEIGKGEKKEKKMKKKRKQELEWWESMDEEKFDGVLKKEKRRPVREWWKEECCEDVAKRKKKKKKRKGVSVNGDDDNCDDWWVSDDAMYGDKRKMKSRSRNNNRGNMDWWLEGLSGELWRARRNSFDSASGEIPKSGGVSSTPSMRGTVCYVAPEYGYGGDVSEKCDVYSFGVLLLVIISGRRPLQVNGSPMSEFHRANLLSWARHCARNGKLIELVDQSIESLDEEQALLCIKVALLCLLKLPARRPSMKEVVGMLIGELEPPQLPVEYSPSTPSRFPFKSRKKGR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0784 648 MobiDBLite consensus disorder prediction 233 253 - -
Apr6g0784 648 ProSiteProfiles Protein kinase domain profile. 72 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0784 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Apr6g0784 648 PANTHER OS07G0586332 PROTEIN 3 648 IPR044576 -
Apr6g0784 648 SMART serkin_6 72 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0784 648 Gene3D Transferase(Phosphotransferase) domain 1 482 624 - -
Apr6g0784 648 Gene3D Transferase(Phosphotransferase) domain 1 57 236 - -
Apr6g0784 648 Pfam Protein kinase domain 76 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0784 648 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 648 - -
Apr6g0784 648 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Apr6g0784 648 MobiDBLite consensus disorder prediction 629 648 - -
Apr6g0784 648 SUPERFAMILY Protein kinase-like (PK-like) 56 636 IPR011009 -
Apr6g0784 648 MobiDBLite consensus disorder prediction 238 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0784 Apr-Chr6 12228456 12230935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0784 480 619 Receptor kinase-like Gene Family AT3G58690 31.690 6.81e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Apr6g0784 Pkinase 5.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0784 - - gmx:100794183 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0784 6 12228456 12230935 Apr6g0784 6 12228456 12230935 ECH
Apr6g0784 6 12228456 12230935 Apr8g2258 8 33016640 33018697 PCT