Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0780 ATGCCACTCTTTTCTTTATCAAACTCCAAATGCTTTTGGAGAACTTCAATTGCATTTGCATTTTCCTTAACCTTTCTCTTCATTGCAAACTCAACCACACTCCAAACCCCATCTCCAACTTCATGCAATAACGACCCTTACAAGCAACTCAACCTTATCCTCAACCCAAACGGCACCGTCACGCGCCCCAATAAACCCCCAGAGAGCCCTCCCGCCCCCGATCCCACCACCCCCAACCTCGTACTCTCCAAAGACCACACCATTAACCAATCGAAAGGCACGTGGGTGAGGATCTACCTACCCCGCAAAGCACTCGATCACAGCTCCAAACTCCCCCTTGTGGTTTTCTTCCATGGGGGCGGGTTCATATTTCTCAGTGCGGCCTCGACGATTTTCCACGATTTCTGCCTCAACATGGCAAACGACGTCGCTGCCATCGTTGCGTCCGTAGAGTACCGTCTCGCACCGGAACACAGACTCCCCGCGGCGTACGAGGATGCCGTGGAGGCGCTACACTGGATAAAAACCAACCAAGTGGATGATTGGCTGAAAAATTACGCTGATTATTCCCATGTTTATCTCATGGGGAGTAGTGCGGGAGGAAACATAGCCTACAACGCGGGTCTACGTGTAGCTGCGGCCAATGATGATGATCAAGAGCTTAAGATCAAAGGGCTTATTTTGGTGCAACCGTTTTTCAGTGGGACCCACAGGACGGGTTCGGAGCTGAGGCTTGCGAATGAGCCTCATTTGTCACTGTGTAATAACGATGCGTTGTGGGAATTGTCGTTACCGGTTGGGGTTGACCGTGATCACGAGTATTGCAATCCGACGGCGGGGAATGGTGGGAAGAGAGTGGAAATGATCAAACATCGTGGATGGTGGGTACTGGTTACCGGGTGTCGCGGTGACCCACTTGTGGATCGTCAAGCGCAGTTAGTGAGGTATATGCAAAGAGAGGGTGTGAGAGTTGTGGGACATTTCACAGCGGGGGATTATCATGGGATTCAAGACACTCAGCCTTTGAAAGCAAAGGAACTCTTTGTGGTTGTCAAAACTTTTATCGAAGCTCTGTCTTCTGTGAATTGA 1089 0.5041 MPLFSLSNSKCFWRTSIAFAFSLTFLFIANSTTLQTPSPTSCNNDPYKQLNLILNPNGTVTRPNKPPESPPAPDPTTPNLVLSKDHTINQSKGTWVRIYLPRKALDHSSKLPLVVFFHGGGFIFLSAASTIFHDFCLNMANDVAAIVASVEYRLAPEHRLPAAYEDAVEALHWIKTNQVDDWLKNYADYSHVYLMGSSAGGNIAYNAGLRVAAANDDDQELKIKGLILVQPFFSGTHRTGSELRLANEPHLSLCNNDALWELSLPVGVDRDHEYCNPTAGNGGKRVEMIKHRGWWVLVTGCRGDPLVDRQAQLVRYMQREGVRVVGHFTAGDYHGIQDTQPLKAKELFVVVKTFIEALSSVN* 363
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0780 362 Gene3D alpha/beta hydrolase 47 360 IPR029058 -
Apr6g0780 362 PANTHER CARBOXYLESTERASE 120-RELATED 41 357 - -
Apr6g0780 362 MobiDBLite consensus disorder prediction 58 80 - -
Apr6g0780 362 MobiDBLite consensus disorder prediction 63 77 - -
Apr6g0780 362 Pfam alpha/beta hydrolase fold 114 336 IPR013094 GO:0016787
Apr6g0780 362 PANTHER ARYLACETAMIDE DEACETYLASE 41 357 - -
Apr6g0780 362 SUPERFAMILY alpha/beta-Hydrolases 68 343 IPR029058 -
Apr6g0780 362 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 114 130 IPR002168 GO:0016787
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr6g0780 Apr-Chr6 12143241 12144509 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0780 57 337 Carbohydrate Esterase AT5G16080 36.897 1.39e-55 184
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0780 - - gmx:100792597 560.066
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2253 8 32972330 32973785 Apr6g0780 6 12143241 12144509 PCT