Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0772 ATGGGTAAGGAGTGGTATTGGACTGGAAAATCATCCAAGAGAGGTGGAGGAGCTGAAGCAGAAACACCAACTTCTTCAGGTTGCATGTGTGCCGTTTTTCACTTCTTTGATTTCCACCCGTTTAACTTTCCTACCATCAACCAACAACAGCAACAACAAGCCTCTTTCAAGCCACCATCTTGCATTTCAGAAGACTATTCTACAGTCCCTAAAGGTGCTGAAGCACCTAGGAACAGCTTGGAATCAGAAAATGGTAATGGTACAGTTTCATCAAAAGAAGATAATTTTAAAATCCCAAAGAATATCATACAAATTAAGACAAGTGGAAGCACAAGAACAAATGGTGGGGGTGGTGGAAATTTGAATGATATATCCTCAGAAATCAGCAGCTCTCCAGGGATAAAGACACCAACTTTGGTTGCAAGATTAATGGGTCTTGATCTTCTTCCAAATGCACACTCACCTACTTCTTCGTCTTCTTCTTCCTCTTCATGTCTTTCCACTCCAAACCCACAAGGCAATGTTCCTCATCTGCACCACTTGAGACACAAGCAACACATCCAAACCAAACCAAGAAACAGCATAGACAGTAGTGACATTGCAGCTTCTCGTTCCTTGCCTGAGACTCCTAGAATATCCTCTGCAAGAAGATCGGATGTTGATTATCATCACAGACTTTCACTCCAAATGAACAAGGAGAACATGACCCTTGGTGAGGACTTGGAGCTTCCAAGGTTCTCATTTTCGAAAAGGAAATGTGATGAGAACAATAGTAGCAAGAGTCCAAGCCACTATGCCAGACAGATTGTGAAGCAGGTTAAGGAAAGTGTGAGTAGAAAAGTTGGGCAAGACATCACCAACACTCTCAAAACAAGAGAAGAATTTGTGGGCCAATTAAGAAGCAAAAAATCTCCCAAAACATCATTGAAAGCAATTGATGAGACTAGTCCAGGAAAACACTCAAACCCGTCTTCCTATTCTCCAAGGCTTAGATTCATTGACACCAATAAGCACAAACCGAGCACAACTACACCATCACCACTCAACCCAAAGGATCAAAACATGCTGAAACTACCATCAACTCCACACACTCAACCACAGCTTCCAAGAGTTTTTACAAAGCCAAAGCCTCAAGCATTATTGTCTGAGCAACAAGAGTCTCATAACAAGAAATCAGTCACAAAGTGTAAGAAGGTCACCAATGAGAAGTTCAACTCAAGGCTCAAAAGGCCTCCACAGACAACAGACATAATCAGAAACAAGCAAGAAGAACCATTTATCATTCGTCCAACATCACCTACTACAAGAGTCAGTGACATCAAAACTACCAAAAGCAAGAAAACTCATCCACTGTCAAGCAATCTTCTTAACAACATCAACACTGTACCAAATCTTCTCCCTGTCAAGATAGATCCTTCTCCTCCAGCAACCAAAATCCCTTCAAAACAGTCACAGGCATCTGATACCCAAGAGTCCAAAAGCATCTCACAGTTGTCTAGTTGTTCACGCCAGAGGTACAAACAAGAAAGAACAAGCACACTCGCCACCCGAGAAAGCACCAACACATCAGAAAACAAACTTAACGGTGCCTCTATCACCGGAACCAAACACCACACACCAGAATTTCAGTACATCACAGGAATCCTTAACCGTACCACTACCCCAAACAAAGAGGGTACCCCCACAACAACATTGTCCTTCAACCAATGGTTTTCTCCAACTCATCTACTAGACCCATCAATCTTCCACCACTTAGAACACCGCAACAACGACAAAAATCGCAACTTTTCCTCAAAAAACGAACTGGGTCAACGTTGGAACCGAAGGTTGTTGTTTGATTTGGTGGATGAGGTGTTAAAGGAAATTATAAAGCCAAAAGGGAACCAAAAAAGGCTTTGGTTCTTGAAGGGTGTTTGCTACCAAGGAAGCGTTGAAGGGTTGATAGAGAGAGTGTGGAAAAGGGTTGAGGAGTTCCCACGTGCCAAGTGTGAGGTTTTGGAAGATATTGATGCGTTGATTGAAGCACAAGACATGGAAGATGAAGATGAAAATGGAACTGAAGAAGAAGGAAAAGGATTGGTGGCAGAGATTGAAGGGAACATATGGGACACGTTAGTGCATGAAACGGTTATGGTTATGCATTTTTGTGGAAGTGTGGGAAGTGGGGTCCATGTCTTTGCTTGA 2184 0.4249 MGKEWYWTGKSSKRGGGAEAETPTSSGCMCAVFHFFDFHPFNFPTINQQQQQQASFKPPSCISEDYSTVPKGAEAPRNSLESENGNGTVSSKEDNFKIPKNIIQIKTSGSTRTNGGGGGNLNDISSEISSSPGIKTPTLVARLMGLDLLPNAHSPTSSSSSSSSCLSTPNPQGNVPHLHHLRHKQHIQTKPRNSIDSSDIAASRSLPETPRISSARRSDVDYHHRLSLQMNKENMTLGEDLELPRFSFSKRKCDENNSSKSPSHYARQIVKQVKESVSRKVGQDITNTLKTREEFVGQLRSKKSPKTSLKAIDETSPGKHSNPSSYSPRLRFIDTNKHKPSTTTPSPLNPKDQNMLKLPSTPHTQPQLPRVFTKPKPQALLSEQQESHNKKSVTKCKKVTNEKFNSRLKRPPQTTDIIRNKQEEPFIIRPTSPTTRVSDIKTTKSKKTHPLSSNLLNNINTVPNLLPVKIDPSPPATKIPSKQSQASDTQESKSISQLSSCSRQRYKQERTSTLATRESTNTSENKLNGASITGTKHHTPEFQYITGILNRTTTPNKEGTPTTTLSFNQWFSPTHLLDPSIFHHLEHRNNDKNRNFSSKNELGQRWNRRLLFDLVDEVLKEIIKPKGNQKRLWFLKGVCYQGSVEGLIERVWKRVEEFPRAKCEVLEDIDALIEAQDMEDEDENGTEEEGKGLVAEIEGNIWDTLVHETVMVMHFCGSVGSGVHVFA* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0772 727 MobiDBLite consensus disorder prediction 151 218 - -
Apr6g0772 727 MobiDBLite consensus disorder prediction 49 132 - -
Apr6g0772 727 MobiDBLite consensus disorder prediction 151 174 - -
Apr6g0772 727 MobiDBLite consensus disorder prediction 301 368 - -
Apr6g0772 727 MobiDBLite consensus disorder prediction 79 132 - -
Apr6g0772 727 Pfam Domain of unknown function (DUF4378) 541 708 IPR025486 -
Apr6g0772 727 MobiDBLite consensus disorder prediction 296 370 - -
Apr6g0772 727 Pfam DUF761-associated sequence motif 125 154 IPR032795 -
Apr6g0772 727 MobiDBLite consensus disorder prediction 447 464 - -
Apr6g0772 727 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 713 - -
Apr6g0772 727 MobiDBLite consensus disorder prediction 191 212 - -
Apr6g0772 727 MobiDBLite consensus disorder prediction 430 536 - -
Apr6g0772 727 MobiDBLite consensus disorder prediction 1 21 - -
Apr6g0772 727 MobiDBLite consensus disorder prediction 477 536 - -
Apr6g0772 727 PANTHER DUF4378 DOMAIN PROTEIN 1 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0772 Apr-Chr6 12033512 12036616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0772 103 709 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 35.423 1.56e-65 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0772 - - gmx:100795947 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0772 6 12033512 12036616 Apr6g0772 6 12033512 12036616 ECH
Apr6g0772 6 12033512 12036616 Apr8g2245 8 32895104 32897564 PCT