Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0766 ATGGGCGGTGAAAAGGGTATATTAACTGTATATGAGTACATTTCTAATGGAACTGTTGCTGATCATCTTCATGGTGGAAGAGCCAAACCAAGAAACTTCCCTTGGCATATTAGAATGAACATTGCTGTGGAGGCAAGTGCATTGAAATGTCTTCATGTTTCTAATATCATCCATAGAGATGTGAAAACCCACAACATACTTCTTGATGATCAATTTTGTGTCAAAGTAGCTGATTTTGGACTCTCACGCCTTTTTCCAAACCTTGTCACCCACATCTCAACAGCTCCACAAGGAACTCCAGGTTATGTGGATCCAGAATACCATGAGTGCTACCAGCTTACTATCAAAAGTGATGTTTATAGGTTTGGAACGGTACCAATTGAGCTGATATCATCGTTGCCCCAAGTTGATATGACAAGACATGGGCATGAAATTAATTTGGCAATCAACAAGGTGAAATATATTTGCAAGTTTAAAAGTAGATGA 486 0.3889 MGGEKGILTVYEYISNGTVADHLHGGRAKPRNFPWHIRMNIAVEASALKCLHVSNIIHRDVKTHNILLDDQFCVKVADFGLSRLFPNLVTHISTAPQGTPGYVDPEYHECYQLTIKSDVYRFGTVPIELISSLPQVDMTRHGHEINLAINKVKYICKFKSR* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0766 161 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 153 - -
Apr6g0766 161 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0766 161 SMART serkin_6 4 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0766 161 Pfam Protein tyrosine and serine/threonine kinase 5 138 IPR001245 GO:0004672|GO:0006468
Apr6g0766 161 Gene3D Transferase(Phosphotransferase) domain 1 2 158 - -
Apr6g0766 161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 56 68 IPR008271 GO:0004672|GO:0006468
Apr6g0766 161 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 153 IPR044652 -
Apr6g0766 161 SUPERFAMILY Protein kinase-like (PK-like) 7 148 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0766 Apr-Chr6 11951255 11952662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0766 5 153 Receptor kinase-like Gene Family AT1G25390 65.584 2.36e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr6g0766 PK_Tyr_Ser-Thr 2.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0766 - - aprc:113866679 332.413