Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0764 ATGGGTAAGGGGGGAATGTCAATTGATGATCATGGAGAAGGCAAGGAAGTTGTTGAACAAGAAGAGAATATGGCTGCTTGGCTTGTTGCTATGAACACTCTCAAGATTCAACCTTTCAGTCTTCCTACTCTTGGGCCCCATGATGTCAGAGTTAGAATGAAGGCTGTTGGTATCTGCGGGAGTGATGTTCACTACCTCAAGACACTGAGGTGTGCACACTTTGTTGTAAAAGAACCAATGGTTATTGGTCATGAGTGTGCTGGGATCATAGAAGAAGTTGGTAGCCAGGTAAGGACTTTGGTGCCTGGTGACCGAGTGGCGATTGAGCCTGGGATCAGTTGTTGGCGTTGCGACCACTGCAAACAAGGTCGATATAATTTATGCCCTGATATGAAGTTTTTTGCTACTCCACCAGTCCATGGTTCTCTGGCTAATCAGATAGTGCATCCAGCAGACTTATGTTTTAAGCTGCCAGACAATGTGAGCCTGGAGGAAGGGGCAATGTGTGAACCCTTAAGTGTTGGCGTTCATGCTTGTAGGAGAGCTAATATTGGACCGGAGACAAATGTGTTGATCATGGGAGCAGGACCCATAGGACTTGTTACAATGCTTGCAGCTCGTGCTTTTGGGGCACCCAGGATAGTCATTGTGGATGTGGATGACCATCGTTTATCTGTGGCAAAAACTCTTGGTGCAGATGAAATTGTTAAAGTATCAACAAACATTCAGGATGTGGCTGAAGAAGTTCTGCAGATACATAAGGCTATGGAAGCTGGTATAGATGTTACCTTTGATTGTGCTGGTTTTGACAAAACCATGTCTACAGCATTGAGTGCTACTCAGCCAGGTGGCAAAGTTTGCCTAGTGGGAATGGGCCATTCTGAAATGACTGTCCCACTCGCCCCAGCTGCAGCAAGGGAAGTTGATGTGGTTGGAGTTTTCCGCTATAAAAACACGTGGCCTCTTTGCCTTGAGTTTCTAAGGAGTGGCAAAATTGATGTAAAACCCCTTATAACTCACAGGTTTGGATTCTCTCAGAAGGAAGTGGAAGAAGCCTTTGAAACAAGTGCCCGTGGTGGTAATGCCATTAAGGTCATGTTCAATCTTTAG 1110 0.4559 MGKGGMSIDDHGEGKEVVEQEENMAAWLVAMNTLKIQPFSLPTLGPHDVRVRMKAVGICGSDVHYLKTLRCAHFVVKEPMVIGHECAGIIEEVGSQVRTLVPGDRVAIEPGISCWRCDHCKQGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDHRLSVAKTLGADEIVKVSTNIQDVAEEVLQIHKAMEAGIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLAPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0764 369 Gene3D - 174 314 - -
Apr6g0764 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 160 333 IPR036291 -
Apr6g0764 369 Pfam Zinc-binding dehydrogenase 197 327 IPR013149 -
Apr6g0764 369 SUPERFAMILY GroES-like 23 195 IPR011032 -
Apr6g0764 369 SMART PKS_ER_names_mod 29 367 IPR020843 GO:0016491
Apr6g0764 369 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 83 97 IPR002328 GO:0008270|GO:0016491
Apr6g0764 369 PANTHER L-IDONATE 5-DEHYDROGENASE 18 369 - -
Apr6g0764 369 CDD sorbitol_DH 25 368 IPR045306 GO:0016616
Apr6g0764 369 Pfam Alcohol dehydrogenase GroES-like domain 46 157 IPR013154 -
Apr6g0764 369 Gene3D - 33 356 - -
Apr6g0764 369 PANTHER SORBITOL DEHYDROGENASE 18 369 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0764 16 302 Monolignol Biosynthesis Gene Families AT4G37980 27.027 2.61e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0764 K00008 - gmx:100820630 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0764 6 11922994 11927549 Apr6g0764 6 11922994 11927549 ECH