Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0762 ATGGCTGTTGCCAAGAGCAACAGCAGCAGTGAACCTTGTACTTCATACAATTGTTACAAAGTAGGAGGCTTGACTGAAACCATATTAGACACAAATCATATCTCTAATTTGAAAGATCGGTACGTTCTTGGGGAGCAATTGGGTTGGGGGCAGTTTGGTGTCATAAGGGCATGCTCTGACAAGTTAACAGGAGAGGTTTTGGCCTGCAAATCAATTGCTAAAGATAGGTTGGTTACTTTGGACGATTTGAGAAGTGTCAAACTCGAGATAGAAATAATGGCTAGGCTATCTGGGCACCCCAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAAAGTTTTGTTCACTTGGTGATGGAGCTTTGTGCTGGAGGAGAGCTGTTTCACCGATTAGAGAAGAACGGACGGTTTTCCGAATCTGATGCCAGGGTTCTCTTTAGGCACCTAATGCAGGTGGTTTTGTATTGTCATGAAAATGGGATTGTTCATAGAGATCTCAAGCCTGAGAATATTCTCTTAGCTACACGAGCCTCCTCATCTCCTATTAAGTTGGCAGATTTTGGGCTTGCAACCTACATCAAGCCTGGTCAGAGTTTACATGGGTTAGTTGGGAGTCCATTCTATATAGCTCCAGAGGTACTGGCTGGTGCATATAACCAGGCTGCTGATGTGTGGAGTGCAGGTGTTATTCTTTATATTTTATTGAGTGGGATGCCTCCATTTTGGGGTAAGACCAAATCACGAATATTTGAAGCTGTTAAAGCTGCTTCCCTGAGATTTCCATCGGAACCTTGGGATTGCATTTCTGAATCAGCTATGGATCTGATCAAGGGAATGTTGTGCACAGACCCTTCTCGAAGGCTCACTGCCCAAGAGGTTTTAGATCATTGCTGGATGGAAAGCGATCAAACAAATCCTGAACAACTGAGTGAACATAAAATTAAAAGTTATGAAGAATGGGATGTTGGTGGCAGCTCATTCTCTGCCTCATTTATGTCCAGGAATCAAGACATCAGCTTTGGCACTGGTTTGCCTACCTGCGACGCTCAATCACCTACATTCACTTGCAGATCTTCATTTTCTTCTTTTTTGGTGGAGCCGGTGTCTCCTTCTCTAGTTTCTGGTGGTTTTTCATTTCAGAGCACAGGCGATTCCCCTACTGGTTTGGAATTTTCTTCGCCTGTTCCCTCTATGCTTAGCTTTTCATTTGTCAGCCCTGCATCAGTTGCTGAGCAAAAGGCTTGTAAGTTAGAGTGCTCAGCTGACATGTCAGAGGTTAATGCAATTGCTGGAGAAGCAAACTTGGGAAAGTTACTTATGCTACAAGATTCTCCCTTTTGCATTGGACATGATGTTAAAGAAATGGATCGCAGGCCAGTGGAGACTAAAAGGGCAGGTGGAATGAATGGACATAGGGTATTGGGAATCCACAGCAAGAGGAACAGGACAATTGGACTGGGCGAGTGTGAGCAACTTGACCTTGTGGTCACTGAATCAGTCATCCGTTGGTCTTCATGCACTCAACTCCCTACATCTTTGAGATCATCTCTTGTCTGCTAA 1560 0.441 MAVAKSNSSSEPCTSYNCYKVGGLTETILDTNHISNLKDRYVLGEQLGWGQFGVIRACSDKLTGEVLACKSIAKDRLVTLDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEESFVHLVMELCAGGELFHRLEKNGRFSESDARVLFRHLMQVVLYCHENGIVHRDLKPENILLATRASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFEAVKAASLRFPSEPWDCISESAMDLIKGMLCTDPSRRLTAQEVLDHCWMESDQTNPEQLSEHKIKSYEEWDVGGSSFSASFMSRNQDISFGTGLPTCDAQSPTFTCRSSFSSFLVEPVSPSLVSGGFSFQSTGDSPTGLEFSSPVPSMLSFSFVSPASVAEQKACKLECSADMSEVNAIAGEANLGKLLMLQDSPFCIGHDVKEMDRRPVETKRAGGMNGHRVLGIHSKRNRTIGLGECEQLDLVVTESVIRWSSCTQLPTSLRSSLVC* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0762 519 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Apr6g0762 519 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 5 512 - -
Apr6g0762 519 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Apr6g0762 519 CDD STKc_CAMK 40 298 - -
Apr6g0762 519 Gene3D Transferase(Phosphotransferase) domain 1 128 326 - -
Apr6g0762 519 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 512 - -
Apr6g0762 519 SUPERFAMILY Protein kinase-like (PK-like) 38 370 IPR011009 -
Apr6g0762 519 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0762 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Apr6g0762 519 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g0762 519 Pfam Protein kinase domain 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0762 Apr-Chr6 11872518 11876083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0762 34 307 EF-hand Containing Proteins AT5G12180 50.000 5.97e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr6g0762 Pkinase 6.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0762 - - gmx:100776088 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0762 6 11872518 11876083 Apr6g0762 6 11872518 11876083 ECH