Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0757 ATGGCTTGTGAGAGAGTCGATGTCAGTATTTTGGTTGTGGATGACGATGATGTTTCTCTGGCCATTGTTGCTAATATACTCAACTCATTGGAATACAAAGTTCTCATTGCCAACGGTACCCATAATGCTTTGGAGACTCTTCGAGAGTTTGAAGGCTTTGTCGATCTTGTCATTACAGAACTTCATATATCAGGAATGAATGGATTTGAATTTCAAAAGCTAGTTATAAATGAATTCCAGATACCAGTAATAATGATGTCTGCAGATAGCAGAAAGAGTGTGATGTCGAAGAGTTTAGAAAATGGTGCAGCACACTTTATTTTGAAACCTTTTTGCAGAGATGACTTCAAAGACATTTGGCAGTTTGCTATGGCTGCAAGGAAAGGGACAGTAACTACTGAAAACATTGAAGGAGAGTCAACAGGTGATAAGGTTATTGTTCAGGATGTTAACTCTTCTGAAACATCATCATTGGCTAAGCCTAAGAGAAAAAGGAAGTATGGCCAGAGAAAGAATAAGCAAATGAGTAAGGAAGACCAAAGTGAAGAAAGCTCTCAGCTTGCAAAGAAACAAAAAGTTGTTTGGACAACTGATCTTCACAATCTCTTTCTTCTTGCTATAAAACAAATTGGAATGGACAGAGCTGTGCCAAAGAAAATTCTGGAAATCATGAATGCGCCGAACTTAACTAGAGAAAATGTTGCTAGTCACTTGCAGAAGTATCGAATGTTCCTGAGAAAAGTAGCAGAGAAAGGGTTAGTTGAGGGCTTATCTGACAGAACTCTAAGGTCAAGGTTTGCATCTGGCCTTTCAGCGTCACTGATCAGAGACATCCAAACAAGAACTGCGAAATTACGTGTTCCCGCGCAGCCATATCTGAAAAGATTAGCACATCAACCAGAAAATGGAGGGAAGGCCAATGCCGTTAAACCTTTCAACCATGTTTCAAGAAATGCTTATGTTACTCCACATGGAAGAAGTCATCATCAATTTCCTAATGCATTCCACAAAGGCTTGAATTTGATGCTTCAAAACCAGCACGTTGATTCTTGGAATGTATCACAATCAAGGTATGGAAGTAATGTTGGAGCCAATAGTACCCACCAAAAAATTTTGGGAAGCTATGCAAACCCAATGCCCTATCAAGCAAAAATCTCATGCAATGCTGGTGCTGGATTTCCAACATGTGGAATAAATGGACGTGGCTTGATGACTTCAACAAATGGCCTAATAGGAGGATTGAAATATGGTGAGCCAATGTACCAAAACTATGTTAATTCAATGGGAAATCACCAAAACTTTAGCTATGGTCCAGGAAATGGGAAAACCGCATCTTTGAACAGTTCTAACAATCAGCCTTGGAGCACTACGTCTATTTATAATCCCAACACTAATATCCAACTGAATGGTGGATCAAAAATGGTTGGAAATGGGATAAAAGGTGGGTTTAAAAGTACTGTTGGTGCAATGGATTCTATTGCAAATAACAACAACTTTAGCTTGATCAATGGGACTAGTCAAAATGCAAAAATGAATGTCGCACCATTGGGGCATGGAAATTTTGGTTTATCTCAAGGAGGGTTTGGTATTGCTTCTGCTTCGAAAGCTGAGGATGGGTGGTCAAATGAGTTTCCACAAACAATGATAACTAATGGAACTAAAGCAGAAAATAGTTCAGGGTTCCCACAGTTTCCTCATCAACTAGATGACAATGTTGAAGAAAATGAGAATCTGTATAATAATGCCACTTCAATATGGGAGAGTAAGTTTACCCACCTGGAAGATGACCTTGCTGACATTTTCACGGTGTTAGATGAAATGAATCTTCTTAATGAGACTGATGAGAACCCAGATGCAAGCGAAGTTTTAGAGTCTATCCTTTCTGGCCCTCGTCACGATGTGCAATCCCTTGAGCAGTCTATCGGAGCTGGTGATGTGATTGATAACCCAAATGAAGGCTCATTAAATCTACCAAACAAGTCCACGACATGCTCTGACAAAAATTCTAACCAGCTGGAAGGATATGACGGATTTGGGGACATGGAACCGTTTGACGAGTTCCTAGTAGATGATGTTTCCTCAGCAACTCACTCAGCTATTGATCAGGATTGGGATATGGAACTCATTGAAGCCTTGTTTGGTGATGAGGCAAACTAG 2157 0.3992 MACERVDVSILVVDDDDVSLAIVANILNSLEYKVLIANGTHNALETLREFEGFVDLVITELHISGMNGFEFQKLVINEFQIPVIMMSADSRKSVMSKSLENGAAHFILKPFCRDDFKDIWQFAMAARKGTVTTENIEGESTGDKVIVQDVNSSETSSLAKPKRKRKYGQRKNKQMSKEDQSEESSQLAKKQKVVWTTDLHNLFLLAIKQIGMDRAVPKKILEIMNAPNLTRENVASHLQKYRMFLRKVAEKGLVEGLSDRTLRSRFASGLSASLIRDIQTRTAKLRVPAQPYLKRLAHQPENGGKANAVKPFNHVSRNAYVTPHGRSHHQFPNAFHKGLNLMLQNQHVDSWNVSQSRYGSNVGANSTHQKILGSYANPMPYQAKISCNAGAGFPTCGINGRGLMTSTNGLIGGLKYGEPMYQNYVNSMGNHQNFSYGPGNGKTASLNSSNNQPWSTTSIYNPNTNIQLNGGSKMVGNGIKGGFKSTVGAMDSIANNNNFSLINGTSQNAKMNVAPLGHGNFGLSQGGFGIASASKAEDGWSNEFPQTMITNGTKAENSSGFPQFPHQLDDNVEENENLYNNATSIWESKFTHLEDDLADIFTVLDEMNLLNETDENPDASEVLESILSGPRHDVQSLEQSIGAGDVIDNPNEGSLNLPNKSTTCSDKNSNQLEGYDGFGDMEPFDEFLVDDVSSATHSAIDQDWDMELIEALFGDEAN* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0757 718 Pfam Response regulator receiver domain 10 117 IPR001789 GO:0000160
Apr6g0757 718 Pfam Myb-like DNA-binding domain 193 242 IPR001005 -
Apr6g0757 718 PANTHER RESPONSE REGULATOR 23-RELATED 8 525 - -
Apr6g0757 718 SMART REC_2 8 120 IPR001789 GO:0000160
Apr6g0757 718 Gene3D - 8 141 - -
Apr6g0757 718 ProSiteProfiles Response regulatory domain profile. 9 124 IPR001789 GO:0000160
Apr6g0757 718 MobiDBLite consensus disorder prediction 142 157 - -
Apr6g0757 718 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 190 243 IPR006447 GO:0003677
Apr6g0757 718 Gene3D - 187 249 - -
Apr6g0757 718 SUPERFAMILY CheY-like 8 126 IPR011006 -
Apr6g0757 718 MobiDBLite consensus disorder prediction 172 186 - -
Apr6g0757 718 MobiDBLite consensus disorder prediction 142 187 - -
Apr6g0757 718 CDD REC_typeB_ARR-like 10 123 - -
Apr6g0757 718 SUPERFAMILY Homeodomain-like 188 247 IPR009057 -
Apr6g0757 718 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 187 246 IPR017930 -
Apr6g0757 718 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 525 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0757 Apr-Chr6 11805277 11815276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0757 6 266 Response Regulator Gene Family AT5G07210 40.418 6.32e-56 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Apr6g0757 Response_reg 1.6e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0757 - K14491 aprc:113866677 1429.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0757 6 11805277 11815276 Apr6g0757 6 11805277 11815276 ECH