Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0751 ATGACCCCCATGACACCTCGGGTGGCAGGAGGGTTAACCCAATCTTCATCAAGTTCTGGAATTTTCTTTCAAGGAGATGGGCAGTCGCAGAATTTAGTTAACTCTCATTTAAGCTCGTCTTTGGTTAACTCATCTAGCACAGTTCCTGGAGCTGGTCGTTCAAACCTGGGGCCGGTTTCTGGGGATATGAATAATGCAGTTTTGAACAGTGTGGCAAACTCAGCACCAAGTGTTGGAGCCAGTTCTTTAGTCACAGATGCAAATTCTGCACTTTCTGGTGGCCCCCATTTGCAGAGAAGTGCCAGTGTTAATGCAGACTCATACCTACGATTACCTGCCTCACCCATGTCATTTACCTCTAATAATATTAGTATTTCTGGATCATCAGTGATGGATGGCTCCACTGTAGTACAGCAGAGCTCTCATCATGATCAGAATGTTCAGCAATTGCAGCAGAATCAGCAGCAGCCACAGGGCACTTCAAGTGTTACGTCTTTGCCTGCATCTCAAACTGGCCCATCTCCGCTCCAAATGGGTGCCCAAGTCCCTGGATCTTTCATTCAAGATCCAAATAATATATCTCATCTGCCAAAGAAACCTAGATTGGATATTAAGCAGGATGATATAATGCAACATCAGCAGCAGCAGCAGCAGAGAATGAGACAGCAACAGATCTTTCAGTCAATGCCACAATTACAGCGAGCACACTTGCAACAGCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAAATGCAACTGAGGCAGCATTTACAGCAACAAGTGATGCAGCCATCTTCTGTAAAGCGTGCATATGACAGTGGTGTTAGTGGGGTATGTGCTCGTCGATTGATGCAGTATCTCTATCATCAAAGGCAACGACCAAATGATAATTGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAAAAAAGGTGGTGCTTGTCTTTATATAATAACGTTGGGCATCATGCACTTGGTGTTTTCCCTCAAGCAGCAATGGATGCATGGCAGTGTGACATATGTGGTTCTAAATCTGGACGGGGATTTGAGGCTACTTATGAAGTACTACCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTGATTGATGAACTTTTATTTCTGGACATGCCACGTGAAATAAGATCTCCTTCTGGTGCAATGATGTTAGAATACGCAAAAGCAGTTCAAGAGAGTGTATATGAACAGCTTCGTGTTGTTCGCGAAGGTCAACTTCGGATCATATTCACTCAGGACTTAAAGATATTAACTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAATCAATTAGTTCAAGTAGCTCAAAAATGTCAGAGTACAATTGCTGAAAGTGGATCAGATGGGGTTTCTCAGCAAGACTTACAAACAAACAGCAACATGGTATTGACAGCAGGGCGTCAGCTTGCAAAGACATTGGAGTTGCAATCCTTAAATGACTTGGGCTTTTCTAAAAGATATGTGAGATGTCTGCAGATTTCAGAGGTTGTCAACAGCATGAAAGACTTGATCGATATCTGTGCAGAGCACAAAATTGGAGCAATTGAGAGCTTGAAAAATTATCCTCGACTTGCAACAGCGTCGAAGTTCCAGATGCAGAAGATGCAGGAAATGGAACAGCTGGCAAATGTTCAAGGGCTGCCCACTGATCGAAACACACTTAACAAGCTAATGACACTGAATCCTGGATTGAACAACCATATAAACAACAATCATAATATGGTCAATCGTGGTGCTTTGAGTGGGTCAGCTCAAGCTGCTTTGGCACTGACCAACTACCAGAATCTTCTCATGAGGCAAAACTCAATGAATTCAAGCCCTGGCTCACTTCAGCGAGAAGGTTCCTCTTTCAATAATTCGAACCAGAGTCCCTCTTCAGCTTTGCAAGGTGCTGGTCCTGCTTTAATTCCCGGCTCAATGCAGAATTCACCAGTTAGTGGTTTCCAAAGTCCCCATCTACCACCACAGCAACAGCATCAGCAGCAGCAGCAGCACCTTCAACAGCGGTCATTAAGTGCAAATAGCGTAATGCAACAAAATCATTCACAGGGGTCCCAAGGAAATCAAGCACTACATCAGCAGATGATCCAGCAACTGCTGCATGATATGTCAAATAACAATGGGGGAATGCAACCACAGTCTCTTGGTGGACCCAATGTCAACGGAAATATAGCAAAGAATGGGATGAGTTTTGGGGGCCACACTCCACCCATGACTGGAGGTTCTGCCAATGTTCCAGTAAATAATGGCCCTGTTTCAAGGAATAATAGCTTCAAAACGGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAATGGATTCAACCAGAGAACATCTGATTTGCCTCAAAATCTACATTTGCAAGATTTGGTTCAGGACATTGCCCATGAATTCACGGATAACCCCATCTTTAACAGCGATCTAGATGATAACATGGGCTTTGGCTGGAAGGCATGA 2532 0.4412 MTPMTPRVAGGLTQSSSSSGIFFQGDGQSQNLVNSHLSSSLVNSSSTVPGAGRSNLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGGPHLQRSASVNADSYLRLPASPMSFTSNNISISGSSVMDGSTVVQQSSHHDQNVQQLQQNQQQPQGTSSVTSLPASQTGPSPLQMGAQVPGSFIQDPNNISHLPKKPRLDIKQDDIMQHQQQQQQRMRQQQIFQSMPQLQRAHLQQQQQQQQQQQQQQMQLRQHLQQQVMQPSSVKRAYDSGVSGVCARRLMQYLYHQRQRPNDNCIAYWRKFVAEYYSPRAKKRWCLSLYNNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDMPREIRSPSGAMMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILTWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGVSQQDLQTNSNMVLTAGRQLAKTLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICAEHKIGAIESLKNYPRLATASKFQMQKMQEMEQLANVQGLPTDRNTLNKLMTLNPGLNNHINNNHNMVNRGALSGSAQAALALTNYQNLLMRQNSMNSSPGSLQREGSSFNNSNQSPSSALQGAGPALIPGSMQNSPVSGFQSPHLPPQQQHQQQQQHLQQRSLSANSVMQQNHSQGSQGNQALHQQMIQQLLHDMSNNNGGMQPQSLGGPNVNGNIAKNGMSFGGHTPPMTGGSANVPVNNGPVSRNNSFKTASNSDSSAAGGNNGFNQRTSDLPQNLHLQDLVQDIAHEFTDNPIFNSDLDDNMGFGWKA* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0751 843 MobiDBLite consensus disorder prediction 209 240 - -
Apr6g0751 843 MobiDBLite consensus disorder prediction 624 653 - -
Apr6g0751 843 PANTHER LIM DOMAIN-BINDING PROTEIN 7 153 IPR029005 -
Apr6g0751 843 PANTHER LIM DOMAIN-BINDING PROTEIN 162 842 IPR029005 -
Apr6g0751 843 MobiDBLite consensus disorder prediction 131 240 - -
Apr6g0751 843 MobiDBLite consensus disorder prediction 765 806 - -
Apr6g0751 843 MobiDBLite consensus disorder prediction 624 714 - -
Apr6g0751 843 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 7 153 - -
Apr6g0751 843 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 162 842 - -
Apr6g0751 843 MobiDBLite consensus disorder prediction 7 23 - -
Apr6g0751 843 MobiDBLite consensus disorder prediction 1 23 - -
Apr6g0751 843 MobiDBLite consensus disorder prediction 40 59 - -
Apr6g0751 843 Pfam LIM-domain binding protein 283 543 IPR029005 -
Apr6g0751 843 Coils Coil 237 257 - -
Apr6g0751 843 MobiDBLite consensus disorder prediction 756 806 - -
Apr6g0751 843 MobiDBLite consensus disorder prediction 663 714 - -
Apr6g0751 843 MobiDBLite consensus disorder prediction 727 746 - -
Apr6g0751 843 MobiDBLite consensus disorder prediction 131 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0751 Apr-Chr6 11676763 11684623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0751 268 547 C2H2 Transcription Factor Family AT1G43850 59.643 9.74e-110 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0751 - - gmx:100816886 1305.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0751 6 11676763 11684623 Apr6g0751 6 11676763 11684623 ECH